Array 1 4181751-4173335 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058649.1 Vallitalea pronyensis strain FatNI3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 4181750 30 100.0 37 .............................. TCTAATAATACAAATCATTTAGCACGTGGTAGCGATA 4181683 30 100.0 35 .............................. TTAATTTTCTTGAGGGTTTCTTGTTGAGTTTCCTC 4181618 30 100.0 36 .............................. AGGTCCGGTGATTGTTGGACCATTTTATAACATTCG 4181552 30 100.0 35 .............................. GGGCTATCCAGAGAAGGTTTTCAAGAGTGGGATTT 4181487 30 100.0 36 .............................. TATATTGACCAAGGGTTAATTGTCAACACCTTTTTT 4181421 30 100.0 36 .............................. TAACAAAATGTCCCTACGCCTTTGGCTTTAGTTTGC 4181355 30 100.0 37 .............................. ATGAATCCTTTTGAAAATCTTCTACGGATACTGTAAA 4181288 30 100.0 37 .............................. TCGCTATCCAACTCATGTAATCACTCCTTATATTCTA 4181221 30 100.0 35 .............................. TTACGATCATCCAGCAAGCGCATAAAGCATGTCTT 4181156 30 100.0 34 .............................. TCATATTGTGGTAGAAGATGGGGAAATAACACAA 4181092 30 100.0 35 .............................. TGATATAGCGATAGAAAACTATGATAAGATCGAAA 4181027 30 100.0 38 .............................. GCAAGGAAGCCAATTATGAGTACATGGGAAGTTCCCAG 4180959 30 100.0 36 .............................. TTCATCATTCACCGTCCTTTACTAAACCGAACTTTT 4180893 30 100.0 36 .............................. CTCTATATCAAGAGCACCTTTTAATTGTTCAGTTAA 4180827 30 100.0 35 .............................. TTAGTACCGTTCACATTAACAAACAAAGCTTCGTT 4180762 30 100.0 35 .............................. AATCGTATCCCGTTCCACCTTTTACTATCTTCTTG 4180697 30 100.0 35 .............................. CATCTACTCGGCTTATTGCTGATAATAGCTTGCTT 4180632 30 100.0 37 .............................. CGGAACTATAACACCTGTTTGCGTGGAGTAAACTCTC 4180565 30 100.0 36 .............................. TCATTAATAATCTTCATCACGCCTGCAAGCAAGACG 4180499 30 100.0 37 .............................. TGGGAAGCAAGTATAATAGGTCTTATTTAGAATACCT 4180432 30 100.0 36 .............................. TCCAGCCACTTATAATCAGTCTCAGACGCCCCACTA 4180366 30 100.0 37 .............................. ACAGTACTTGGTAGTATTATGGACTTGCCATCTGCCG 4180299 30 100.0 36 .............................. CTAACTCCTGACACTTTTCTATGGTAACATGATTAT 4180233 30 100.0 38 .............................. AAAGAACAAGAGTGTCCCCCTTTTGGACGTAGATTAAC 4180165 30 100.0 37 .............................. CACAACAACAGCAACAAAAAATACTTTCTCTCGCAAA 4180098 30 100.0 36 .............................. TATCTATAATAGTTACTATAGCAATCAGCATAATGA 4180032 30 100.0 36 .............................. GTGTAATTGGGTATGGGATGCTTTTACCCATTCGTA 4179966 30 100.0 37 .............................. TTGTTTAATGCAACCGGAACAAAGAAACTGGTGCCTG 4179899 30 100.0 35 .............................. AGGCATGGTGAACAATTATATATTGTGGCTTGTTA 4179834 30 100.0 36 .............................. TCAGCCGAAAACCTTACTTCCCTAATCTCTCGGATG 4179768 30 100.0 36 .............................. CCAGAAAGGAACGAGGGTTTGGCAACAAAATTATTT 4179702 30 100.0 37 .............................. GATAAATCAAAGCTTGGTTCTGATCCACTAGCAGATA 4179635 30 100.0 38 .............................. TAGGCAAGGTGAGCTGGCTTAATGCCTTCAATGGCATC 4179567 30 100.0 36 .............................. CCGTTCCCGCACCATTGGCCAATGGAAATGGTCTAG 4179501 30 100.0 37 .............................. TTATTACAGCACTCGTAAAGACAGATACAGAAATACA 4179434 30 100.0 36 .............................. AGTATTTAACCTAGAAACTTGGATAACTGCTAGTAG 4179368 30 100.0 36 .............................. CGGAAGAATCCATTATGTATAAGGTGTCTAGACAAA 4179302 30 100.0 35 .............................. ATACATTATTTCCGCCATAGAATTTAACATAACTA 4179237 30 100.0 36 .............................. TCACCTCACTTATACAATGTCCTCTAACATGGTTTG 4179171 30 100.0 36 .............................. CCGATAAACATTCATCTTCGACAAACTCAATCACGT 4179105 30 100.0 36 .............................. AGGGAAGACAGGGGCGTTTATCAGCGCGACCTAGCA 4179039 30 100.0 37 .............................. TATGTCGGATTACTCGGTAATAATTGGTAAATCCCAC 4178972 30 100.0 35 .............................. AATAATGTTCGGATTAAACTAAACAGTACATACTG 4178907 30 100.0 37 .............................. TCCCGATTGGTGAGTTGATTGCATCTTGATTGTCAAC 4178840 30 100.0 36 .............................. TATGTTACGTTGGGTGGACTGTTTGGGAGCAGTCTA 4178774 30 100.0 36 .............................. TCTCTTTCAGGTAGCCATAACTTATATAAAGGCAAG 4178708 30 100.0 37 .............................. TGCGAAGCGCTGACCTTCAATATTCACCTAATATGCA 4178641 30 100.0 36 .............................. TCAACTCCTATTGATGTGTGCTGGTTAGTGGGTTAC 4178575 30 100.0 37 .............................. TTATATATCCTACTTGAACACTGTCACCATGCGAAAA 4178508 30 100.0 36 .............................. CAGCGTGCATAATCTCTAAAAGCATTTCCTCATATT 4178442 30 100.0 36 .............................. CAGCTAAAGTTCTTGACAAATCACTGCAAATAATCT 4178376 30 100.0 36 .............................. AAGTATTTAAATCAGCTCTAGGTAAAAAGAAACACT 4178310 30 100.0 36 .............................. CGTTTACAGTAAATATTAATGGTCTATATGGTTTGA 4178244 30 100.0 36 .............................. ATAATTTTACAATACCAAAAGCACAAAGTGCTAGTA 4178178 30 100.0 36 .............................. AGTATTGCCAGTCTAATCATTTCGCTAAGGACAATG 4178112 30 100.0 36 .............................. AGGAAAGATGCATGCATAATATACCCAAAATTGGTT 4178046 30 100.0 36 .............................. GCGGTCCTCATGACGTCACCTAGAGCATTGGTATTT 4177980 30 100.0 35 .............................. ACGGGACAGCAGAAAGCGTTGAAGCATTGAAGAAA 4177915 30 100.0 38 .............................. TATTTTGTACAAACGCCACAAGCACGTGTTTAACTCAT 4177847 30 100.0 37 .............................. TCACATACTTTTCATAGAGTTCATAAAACCATTTTGA 4177780 30 100.0 37 .............................. TGGTATTCAATGATGTATTACTCAATAGCGAGTTTAA 4177713 30 100.0 36 .............................. AAAGCAGAAAGTATTCTTTTAACTAGAACCCATCCA 4177647 30 100.0 35 .............................. CCCTTGCATGAACTTTGTTGATTCTTGGTGTATGG 4177582 30 100.0 36 .............................. TCATGCTAGCCGATGATAACGAAGCATTGGACATAA 4177516 30 100.0 36 .............................. ACATATGTTCACAATGACGATGTGTACACCTTGATT 4177450 30 100.0 36 .............................. TTATTGAGGTCAAGACTCCACTCTAAAGCCTTTTTA 4177384 30 100.0 36 .............................. TTATTGAGGTCAAGACTCCACTCTAAAGCCTTTTTA 4177318 30 100.0 37 .............................. TCACTAGAAAGGATAAATAGTGGTTGAACAGGTTCGG 4177251 30 100.0 37 .............................. CTGGTATTTTCAACGCACCTGTAAAAGTGATCCCTAC 4177184 30 100.0 35 .............................. ACTCTAGTGCCTACAATGCAACTTCAATCTGCATG 4177119 30 100.0 36 .............................. ACCGGATCTACTTCCCAAACACTTTCACAGTAGTGT 4177053 30 100.0 36 .............................. TACTTATTTAGGAATGTATCAACGCCTATCTTATGT 4176987 30 100.0 35 .............................. ATGTATACATTAACGCTCTTAGGGTATGTTTGAGC 4176922 30 100.0 36 .............................. TTTTGTGTTGCTGTTGAGTCCATAATACAACATTGG 4176856 30 100.0 36 .............................. CTATTAGGCACATTATATGCTGGTCCCCAGCATACG 4176790 30 100.0 36 .............................. TATGCAGAGAATCATGAACTGAAAGAAAACATCAAA 4176724 30 100.0 35 .............................. CACCAATGATTTGATAAAAGACAAAATAGCAGAAC 4176659 30 100.0 35 .............................. AAGGTATTGCAAAAAGTGTCGCAGGATTAGCAGGT 4176594 30 100.0 36 .............................. AAAGTTTTTCGTATTAAAAATGTAATTTGATCATTA 4176528 30 100.0 35 .............................. TTTCTTTAGTCAAGTGAAGTTTATAATCCACAAGG 4176463 30 100.0 35 .............................. AATGAAACTGCGCTGTGATTTCCAGATCCGCCTTG 4176398 30 100.0 37 .............................. GCCAGTGCATGATGTACAATGATGTGCTGGGGTTTAT 4176331 30 100.0 36 .............................. AGGTCCCATACCTATATGCAAAACCAGACATTCCGC 4176265 30 100.0 36 .............................. TTCATTTAGTATCCTCCAATCTGGATTAAACCAAGC 4176199 30 100.0 36 .............................. GTTGTAGCATTTGTTCCATTCCATGGATAAGAGACT 4176133 30 100.0 35 .............................. TATTATAAAAGGTGTTAATGGAGAGATATATCCAT 4176068 30 100.0 35 .............................. TATTGTCACTGTCGCACTTTGGACATTTCATGTAT 4176003 30 100.0 38 .............................. TATGTTCCTCTCTCTGATACAGTCTATCTTCTGAGCAA 4175935 30 100.0 37 .............................. GTATTTATGGACAGGAGGGGAACAAGTGAACATAATA 4175868 30 100.0 36 .............................. TCAAGCAGTTCATCCGGTTCATACTTGAGATTGTTT 4175802 30 100.0 36 .............................. TCATCCTAATTTGATATAATATAGGAGTTCCATAAA 4175736 30 100.0 37 .............................. ATGGGTTGTCTAGCTCTGTCCTGAGAACTGTTGGCTT 4175669 30 96.7 36 .........................T.... TTGCCTTGACCTACCATTTTTTGATACTTCTTCCAT 4175603 30 100.0 35 .............................. CACTTTTCGCACTTAGTAGTCACAGTCTTCGTAAC 4175538 30 100.0 35 .............................. TAGCCTAATGCTTTCATGAATTTCTCTGTCTCTGG 4175473 30 100.0 37 .............................. TCACCTACTCTTCAAAAGGCAATTTGCCATTGTTCCA 4175406 30 100.0 36 .............................. TCAAAAATGGAGAATGGGACTATATCATCTGATCTA 4175340 30 100.0 37 .............................. TTGTGACTATCCGTAGCAATGAAATAGACTGCTAACA 4175273 30 100.0 36 .............................. TTATTCGCTTTAGTAAGCCATACCCCGTTATCCCCG 4175207 30 100.0 35 .............................. TCATATTCATTTGGGTTACTTATATAACATCTTTC 4175142 30 100.0 37 .............................. TGGACTATGTTGTATTTCATAATCTTACATGCTTCGA 4175075 30 100.0 35 .............................. TCAAATACACTTTGATTTTTTAAGCTTTTCACATA 4175010 30 100.0 35 .............................. ATGTAATCATATTGGTCTTGTGTTAAAGCTCCAGG 4174945 30 100.0 36 .............................. AAGATTGCAAATTCATTACATTCTTTTACATATATT 4174879 30 100.0 37 .............................. CGCAATGGTGAGATTGATTGGGATACATGGGAGGAGG 4174812 30 100.0 36 .............................. TCTGCTTCAACTTCTCCATATATTGTCGTAACCAAA 4174746 30 100.0 35 .............................. TGAAGTCCGGTTGTTTCAATATCAAAAACAATATG 4174681 30 100.0 36 .............................. TGTTAAAAGTGTTATTCTAGAAGGTATTGCACCTTA 4174615 30 100.0 35 .............................. CAGACATATAGGGAATGGTGTATCACCAATAGTCA 4174550 30 100.0 35 .............................. GCGGTGAATAAGATTCCTTTTTCACCTGTGAATTT 4174485 30 100.0 36 .............................. TAGTCCAGAGTTGAGCAAGAAACAGCAGATGAACAG 4174419 30 100.0 35 .............................. TACATATACTACTTGCATATGTACATGTATTAACA 4174354 30 100.0 36 .............................. AGGAAAGACAGATACGTTTCTTCAATATGCAGATCA 4174288 30 100.0 35 .............................. TCTGACTCACTCATGTCAATAGGAACTCTAAACTG 4174223 30 96.7 36 ......................G....... GTTGATAAATCTCTGATAATCTACAACCCGATGAAA 4174157 30 100.0 35 .............................. TCAAGATGACGGTTACAGCTCTAGGTCATACAAAC 4174092 30 100.0 37 .............................. TTATATAGGTGTATGTATGGGTCTAAAGGACACAAAA 4174025 30 96.7 37 .................A............ TGAGATTATGCAATAGTTTGTAATCTATATTAGATTG 4173958 30 93.3 35 .........G.......A............ GCTTGATCTATTGTAATATACCTGCTTACCCTTGC 4173893 30 96.7 36 .................A............ GTATTTCTTCGTTGTCCATATAAGGTATATTAGATA 4173827 30 96.7 36 .................A............ TATATCTGGTACATGGACATTTGCCCCCAAGAACAA 4173761 30 96.7 36 .................A............ CTAAATTCTTCTTCATTTTCCAGTGTCCCACATCTA 4173695 30 100.0 36 .............................. ATGTTACGCTCGGATTTGTATCATCGCAGGCTATTT 4173629 30 100.0 35 .............................. AAGCACGATTAGAAGCTATTGAGAAAGATGTGGAA 4173564 30 96.7 37 .................T............ TTTTTTTAAGCTTTGCTGAATGCTATTGCCGTAGCAT 4173497 30 96.7 36 .................T............ CAAATAAAATTTGCACATAAATCACCAGCATTTACA 4173431 30 100.0 38 .............................. ATACATTTCCTATACAATAATCAACAGGGCTTTCAAGC 4173363 29 83.3 0 .C.......T......T.....-......G | ========== ====== ====== ====== ============================== ====================================== ================== 128 30 99.6 36 GTTTATAGAATACCTAAGAGGAATTGAAAC # Left flank : ACAATATATTATGCATGTTACATGATTATAGGATCAGACGATATGATTATAATGGAGGTGAGGACGTGGAAGATACCATTTGTTTTCTTGAGTACTATGCATCTCAATTAATGGACAATGCTAAGGAGAGATATGCAAGAACAAATTTAGAATATCAAGAAGTAGAATGCTTCCTCTTACAACATAAGAAACGATTAGACTATATTATTAGTGATTTAAATCTATCAGATAAAGATTTTGTAAAAGAGTATATGCAACAACATTATTATCAAGAAACTTGTATGAATGAATATCTATATATACAAGGTTATAAAGATTGTATTAGATTATTAAAAGAAATTGAAATCATAGCATAATGTAAGTCATCGACCCCCAATAACGCTCAAAACCTAGGGGGTCGATTGCATAAGTTAGATACATATAGAGTACTAAATATCTAGATTTACTGGTATATTATCTTATATGGTGGTATAATTAACTTAATGTTGAGGTTTTTATGG # Right flank : CAAAACTATAAATACTTTTGTTTAATCATCGTTAATATACATTGCATTCAGAACTTCATCCATAGCAATATTAATAACACAAACATGACATATAGTAGTCATGTTTGTTGTGTTATGATAAACTTATCAATAGTTTGGAGGTAAGTATATGAAATTACATGAATTACTAAAGAAGACAAACGATATATTATTAGCAAGTGAAATTGGTTATGTAGGCTACATGAAAAGTGATGGTTTTCCAAGTGTCGCACCACGGTCTTTTTGCACTGCTCCTAATATGATTCATAGTTATTTAAGTACAGGGAGTAATGGCAATCTAGCAAAAGCAATAGTGGAAAATAATAAAATGAGCATTTGTGTGCATAGCGAAGGTAACAATATCACAATGATAGGAACGGCTCATATCATAACAGATATGAAAATGAAAGAAACAATGTGGTTAGATTGGTTTATTGAACATTTTCCGCAAGGTGTTCAAGACCCAAATTATTGCCTAATTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTAAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //