Array 1 1044820-1046617 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080539.1 Citrobacter braakii strain DY2019 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1044820 29 100.0 32 ............................. GCGCCCGCGCCGATTTAGCATAAACTGCATTG 1044881 29 100.0 32 ............................. TTCGGACCTTGGGGGGGGTGTGTGGCCACTGA 1044942 29 100.0 32 ............................. CCTGGCAGCCCTCGCCTCAGGAATTAGGTTGC 1045003 29 100.0 32 ............................. GGTGGGAAAATCGTTATCGCAGTGAGGATTGG 1045064 29 100.0 32 ............................. CCCGATGCCTGGCATGACCACATCGCGCCATT 1045125 29 100.0 32 ............................. AGGGTCGCGATCCGGCAATGCAGCGGAAGAAA 1045186 29 100.0 32 ............................. GCAGAGTGATCACCATCACGAATTACGTCGAA 1045247 29 100.0 32 ............................. GACCGGGTTGCGAATAATAACAGACTCATGCA 1045308 29 100.0 32 ............................. CGCATAGCAGAACTGGAGGCGCGAACGGTGAA 1045369 29 100.0 32 ............................. CATTCCCTGATGCGATTGAGGTAGTTGTCATC 1045430 29 100.0 32 ............................. GATGGTTATGACATGGTGCAGGCGAGCACTAT 1045491 29 100.0 32 ............................. CTGACGCACGGCAACAACTTGATGCTGCTCGC 1045552 29 100.0 32 ............................. TATTACGACGCATACAAAGAGCAATTGCGCCT 1045613 29 100.0 32 ............................. AAACCCAGGAAGCAAGAGCAAGCAGATATCTG 1045674 29 100.0 32 ............................. GCTGTTTTTATTCCGCTAGCGGTGTCTGTGTG 1045735 29 100.0 32 ............................. GATTATCCGGCAAAGCCGCATACTCACGCCTA 1045796 29 96.6 32 ............T................ CCGCGCCAGAGCTGGCGGAAAAATGCCGCCGA 1045857 29 100.0 32 ............................. CCTGGGTGCGGTCACGCTACGGTGAATCACGA 1045918 29 100.0 32 ............................. GTTGGGACATCATGTTCATAATTCAGGATGTA 1045979 29 100.0 32 ............................. TTAGCGTTAATGGCAAAACCTACAACATCGCT 1046040 29 100.0 32 ............................. TGCACGCCTTCAATAAAAATTCCGGTGCGCAT 1046101 29 100.0 32 ............................. AACTGAACATCTCGTGGGTACCGCTGTGTTGA 1046162 29 100.0 32 ............................. CATAATAAATGACGTCTTTTTGGGTACGGCTA 1046223 29 100.0 32 ............................. ACGACCCCGATATTTGGTTAGAGGCAATCGGT 1046284 29 100.0 32 ............................. GATGTATATGAAAATTAAAATTTCAGGGGTAT 1046345 29 100.0 32 ............................. TATTACCTGATGCCGTTATCGTTGAGTATTCA 1046406 29 100.0 32 ............................. AAATAGGTATATTCTTTCTTTTATTTATTGAC 1046467 29 100.0 32 ............................. AATATGGATATTAATAATTAGTTTGATTTTTT 1046528 29 100.0 32 ............................. TAACCCCCGCGTTTTTGTATAGCGTGCCTGCC 1046589 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAGGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTACCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //