Array 1 427113-428321 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH556657.1 Acetivibrio cellulolyticus CD2 Acecescaffold_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================== ================== 427113 30 100.0 38 .............................. CCGTTTGCATTGTTAACAAATTCTGAATTTGTTCTTTT 427181 30 100.0 37 .............................. CCTATTGCATTACTTGGCTTATTTGGTAGCTTTGTCT 427248 30 100.0 36 .............................. TTATTTTTATTTAAACATAATATAAATGATGTTCGA 427314 30 100.0 36 .............................. TCAGTCAAATACAGCTTATATCTTCGAACATCATTT 427380 30 100.0 38 .............................. GCACTTTCCATTAATGGTCTTATGTATTTTGTATCAAA 427448 30 100.0 35 .............................. ACGACTATCCCACAGGTGGTAATTCCACAATAGGA 427513 30 100.0 35 .............................. GTTAATGATAATTCAAATTGATAATAATTTAAAGA 427578 30 100.0 37 .............................. ATTGCATTTTGGAGCTCTATGCTCATAATTCCCCACT 427645 30 100.0 34 .............................. CAAGGAATCTTTACCTAATAGGTATTCCTTGCGA 427709 30 100.0 35 .............................. CTGTCTGCTTCTTGTCTGTTCTTGATAGGGTCATC 427774 30 100.0 37 .............................. TCTAAAACAGTACAACGATATCCAGACCAATCATCCT 427841 30 100.0 35 .............................. TTCATGCAAAGCTCAATGTTCCAGGTATAGTAATT 427906 30 100.0 36 .............................. TATTGCTATTTTGGTTATTACATCAGCTTTATTAAA 427972 30 100.0 35 .............................. ATTCTAGATTTATATTTTGACCAAAGCTCTATTGG 428037 30 100.0 36 .............................. TTGAAGTTTAGGCCTTCTGTAACTGTATCTTCCAGA 428103 30 93.3 35 .............G...........T.... TATACAGATTGTGTAACAGTCTGATAAGGTTCTCC 428168 30 90.0 94 ............A............AT... ATCCAAAGAAGTACTGTTATAGAAGTCTTTAAGAGGTATCCTAATATAGGGAATTGAAGCATAACATTAACTTTCTTATATGCCTTAATAAAAC 428292 30 83.3 0 A..........T...........C....GT | ========== ====== ====== ====== ============================== ============================================================================================== ================== 18 30 98.1 39 GTTATGACCTAACATATAAGGAATTGAAAC # Left flank : AAATATTTTAAGAAGGATGTCCATGCTTGCTTCCTGTTACTGCGGTGGTGAATGGCAAATTAACTATAAGGATTTGTTGGAAAAGTCAAGAACTATTGCAGTTAAGAGGTTAAATACAGAATGGCACGATTGGGAAAGGTATTCAAGCCGTATTCAAGGGAAAGTTAAAATGGGTGGAATTGTAGGCGAAGTAGTATTTAAGGGAAAGTTATCACCTTTTTTGCCTTATATAAATATTGGGAGTGCACTACATATAGGTAAGGGATGCACTATGGGGCTTGGAAAATATGAGTACAAGACATAGAATAGTAAAAGTATAGTCTGCTAATTTTCCAACCTTGATTTTAGTATATATTGCTATGGACCTTGAAAATAGAATATTGTACAGATCCTTATAGTAAAATTATAATAGTATGATGTTGGCTGGAATAAAGTCTTGAAATGCCTACAAAAAAAGACTTCCAGGTAATGTTGATTTTTGAAATGCAGTTTTGATATTG # Right flank : TAACTTAAAAATTATCAAATATTTTTAGAAGAGAGTGATTTAGTGTGGATAAGATTGATTTAAAAAAACACTTTTTAGGATTGCAGAAACAAATGACTTCAAGGTTAATGGCTAATAGGGAGTCTATCATTCATCCAGGAACAAAAGGAGATGCTTCAGAGTTAAATTGGATTGAATGGTTAAAAGCATATTTGCCAAAGAGATATAATGTGGGAAAAGCTTTTATAATAGACTGTAAAGGGAATATTAGTGATCAGATTGATGTCGTTATATACGATCAACAATATTCACCTTTTGTATTTAACCAAGATGGTGCTATCTATATTCCTGCTGAAAGTGTTTATGCAATATTCGAAGTAAAACAGGAACTTAATAAAGACTATATTAAGTATGCTGGAGAAAAAGCAGAAAGTGTTAGATCATTACATAGAACATCGACAAATATATATCATGCAGGAGGTAAATATGAGCCTAAACAGCCATTGAAAATATTATCTGGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.28, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATGACCTAACATATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 429543-430100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH556657.1 Acetivibrio cellulolyticus CD2 Acecescaffold_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 429543 30 100.0 35 .............................. ATCCAAAGTGTTCACATTTACAGATGATTTTGACA 429608 30 100.0 36 .............................. CACGGAAAATACATTTTATGGTTACTATAATCTAAA 429674 30 100.0 36 .............................. TGAATCTTATTCCAGATATAACGAATAGTTAGTAGT 429740 30 100.0 35 .............................. TCCATTCTTGATAATACATCTTCTGCTTCTCCCCG 429805 30 100.0 35 .............................. ACGTATTCTGGGTTATTTGTCATAAGGTAATTATT 429870 30 100.0 36 .............................. TTCGCAAGTTGAAAGGCTTTTATTGCGCTTATTACG 429936 30 100.0 35 .............................. ATAGTGCCACCATTACCATACGAGCCTATAACCCC 430001 30 100.0 40 .............................. TATACACCAAGAATTAAAGCCATAAGCGGCGCCTCCTATA 430071 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 100.0 36 GTTGTGACCTAACAAATAAGGAATTGAAAC # Left flank : ACAACTCCAGCTATTGATATAATGTGTTATGCTGAATCACTAGATTCAATATAACACATTATTAATTAGATGAGTAGATAGTTTATTGAGCAAAAACATGATTATAGGAATATTGTAGATTTGTTAAGAATCATACCTTAATACTGGTGTTATCAGCAATAAGTTGTTCAAGCAGAAATAAAAGGTGCGGAATTATGGGCGAAGTAGTATTTAAGGATTTTTTGACGTATATAGATATTCGAAGTATACTATATATAGTTAAGGGATACTCTATGGGGCTTGGAAAATATGAGTACAAGACATAGAATAATATAAGTATAGTCTGGTAAATTTCCAACCTTAATTTTAGTATATATGGCTATGGACCTTGAAAATAGAATATTGTACAGTTTCTTATAGTAAAATTGGAATAGGATGACATTGGTTGGAAAAAAGTCTTGAAATGTCTAGAAAAAAGACTTCCAGATAATATTGACTTTTGAAATGTAGTTTTGATATTG # Right flank : CATTTTGCTTTCTTTTTGCTGCCTGTTGTGACCTAACTGTATATAAAAAAGTTGCGCTCCCTGCGGGCGTGTAGAAGTGAAGCCAATATGCTGTTTGGGGTGGTAAACCAATATACCAGCAAACATCAATCATCTTGACATCAAATAAGGTTGTCTCTGAATGGGGAGAATTTATGGGTGATCCAGTGATAACTACAATGTTAGACAGGTTGGTGCACAAATGTGAGATATTTGCTATGGACGGTGACAGTTACAGGCTTGCTCATCGGGAATCATGGCTCAATAATAACTGGTCTTTTCTGACATCTTCGGTTATCATTGTTTTTTTGATAGCGTCTTATCAAAAATATTATTGCTAAATGCGATTCAAATATGACTCGATTTGGTGGAGGGCATCCAGGGCGGCATAGATTGAGAAACATTATAACTTGCGGCCATGCCAATATCAGTTACTACCTTTTTAAATTTACTTCTCAGTTTTGTCCAATCTTTATCTGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGACCTAACAAATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 3 791850-780879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH556657.1 Acetivibrio cellulolyticus CD2 Acecescaffold_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 791849 29 100.0 36 ............................. ATTTTTTATAAATACTCACATTGAAGGGTATACTAA 791784 29 100.0 35 ............................. CATTATAAGGCAAATTATGATTGTAATCAAAAGGA 791720 29 100.0 36 ............................. CTCTGTTAAAAACGTCTATAACAACTACCATTCCGA 791655 29 100.0 37 ............................. TGTTACCGCTTTTCATTCACAAGGGAATATCTTGGAT 791589 29 100.0 37 ............................. CAGCTAGCAGAGATATTGAAAGATTAAATAAGACTTT 791523 29 100.0 36 ............................. TTATTTAATTTAATAACATCTATAACTATTGCACCG 791458 29 100.0 35 ............................. GAATAATAGAGCTTCAAAAACTGAAAATAACAAAC 791394 29 100.0 37 ............................. TAACAATTCATCATATAAAAATGACAAATAAGAATTC 791328 29 100.0 37 ............................. CCTAGCAAGATTTAAAACAAATTTCCAATTTTTTACC 791262 29 100.0 37 ............................. GTTTATACTCGAATGTGTGTGCAATTAAGAGAGTCGA 791196 29 100.0 36 ............................. TATTATATGCTGACTTTTAGTGGTGAACTTAACAGA 791131 29 100.0 35 ............................. ATAGCAATTAAATCTATTGTGGAGGATTTGAGAAG 791067 29 100.0 36 ............................. TTTAATTTGTTTAAAGTGTCGTCAAACAATTCGTTC 791002 29 100.0 36 ............................. TATTTATATGCCTTACAATATTAGTTTTATTGTCTT 790937 29 100.0 37 ............................. ACTAAGGGGGCAGGACTTGCTTCAGTACAAAAACCCA 790871 29 100.0 36 ............................. TGGAGTAGGACTTGTCAATTTATTATTTAAAGTCCA 790806 29 100.0 35 ............................. TTCTAACAGGGTACACAAAGGAATATCTTCAAAAA 790742 29 100.0 37 ............................. GACTCAACTTTTGTATTTCCAAATTCAATTAAACTTT 790676 29 100.0 36 ............................. TTAATCTCATTGGGTATTAAATAGTTGAAATTCAAC 790611 29 100.0 36 ............................. TTTACTGGTGCTTATGAAAGAAAAAATGATGAATTA 790546 29 100.0 38 ............................. GAGCTGATTAATTCTATTGATTACTTGCAAGAAAGTTT 790479 29 100.0 35 ............................. ATAGATTTAATACTCTCTTCTCCCTCGCTTACCTG 790415 29 100.0 37 ............................. GGATTATTTCACCTACAAATTTCTGTGGCGCTACCAG 790349 29 100.0 38 ............................. TTCTTTCCAATTTTCTTTACCTATATTGGTATCAACAA 790282 29 100.0 37 ............................. GCTGACACAGTAATTAAGTGAGATGCGGTCTGAGTAA 790216 29 100.0 36 ............................. TTTGCTCTATTCTCAGATGTAGAAGGGTCAACTGAC 790151 29 100.0 36 ............................. TCTTTTATTAACTCTGTTTGACTTGCTGCTGGACGA 790086 29 100.0 35 ............................. ATGATATCAATCATCAAGAAGCCGCAGCTGTAAAA 790022 29 100.0 37 ............................. GCGGACTATATCAAGCTGAAAGTCGAAAAGCATTAAA 789956 29 100.0 37 ............................. TCGTTTCCTATAAGCCAGCATGTAGTCGCTATTCCGA 789890 29 100.0 37 ............................. GTAATGAATTAATAACAGAATCAAATGTAACAAATGA 789824 29 100.0 36 ............................. GATGTTGAAAGTACTTTCATTGACTTTGGAATGCTT 789759 29 100.0 35 ............................. TCAATAGTATTAATAATATTATCAGCTGAAATGTC 789695 29 100.0 37 ............................. TTATAAATAACCTCTTTCATTTACTTGATGTTTTTCA 789629 29 100.0 35 ............................. ATACCTTCATTGCGTATGCGTTGCCTTCAGTGCCC 789565 29 100.0 35 ............................. AGGGAATTAATTTCGGCTTCTGATCTGATTAAACA 789501 29 100.0 35 ............................. TTTGTTCAAGCTTATCTAAAAGAATAAAGCCACAA 789437 29 100.0 38 ............................. TTCCTCCTTCAAATCTCCAAACGTTTGGAATTATTCAT 789370 29 100.0 38 ............................. AGTCTCATCCCACATGATGCGGCTAGCATTATTGGCAG 789303 29 100.0 37 ............................. ACCTTTATCACGGTTGATACTTTTTTGTCTTTTGGTA 789237 29 100.0 36 ............................. GCAAAAGCATTCTTGCTCGTAAACGAGATGCAAAAG 789172 29 100.0 35 ............................. GATCCTGTTGTTGGGGAAAATGATTTATTCGGTAT 789108 29 100.0 36 ............................. GAAGATGTACAGAAAGAGCTTGATGAGCTAAGAAAG 789043 29 100.0 36 ............................. TTTAGTTTCTTGTGGTTCAATATCAATTGATGCAAA 788978 29 100.0 36 ............................. CGCAAAGTCGGTGATTTTCCCTGTTTGCGTCTCAGA 788913 29 100.0 37 ............................. ACTTAATTCTCTGCCTTCTAAACTCATATATAATTCC 788847 29 100.0 36 ............................. TACTCTTGAGATATAGGATAGTACCCAGTTGACTTT 788782 29 100.0 36 ............................. TGGGTTACCTTCTGCGATAGCACAACAAAGCTCAAT 788717 29 100.0 35 ............................. ACAACAATGCCGTATGCATCATCATATTTGATGAG 788653 29 100.0 36 ............................. TGTGGAGCGTCTATTTTAATGTGTATTATTGCTTTG 788588 29 100.0 36 ............................. GATACATACTTGTTAACGGGTGATGCAAGTGTTGAC 788523 29 100.0 35 ............................. GTTCTTTGCATCCCAGCAAGAATGGTGAGTTGTAT 788459 29 100.0 37 ............................. CTCAATGTACACGGTGTCTTCTACAATGCGTGCTTTC 788393 29 100.0 35 ............................. TCTTTTATTAACTCTGTTTGACTTGCTGCTGGACG 788329 29 100.0 35 ............................. AAGGATACCAAGGCTAGCCCGGGGCGAGCGTTGCG 788265 29 100.0 42 ............................. TGAGATGATACAGCCTACCGTAGAAGCGGTACAGAAATTACA 788194 29 100.0 36 ............................. GTCCAAAAGCGAACAACAAAGCGAATTTGGTTTCCA 788129 29 100.0 36 ............................. GAGCTTCGAGAAGTGAAGCAAAATTCTTAACTAAAG 788064 29 100.0 35 ............................. CTTAAAGAAAGCAGTTCGTCAAATCAGATTATTCA 788000 29 100.0 35 ............................. TGACATCTCGATGATATCAACGGTGTTGTGTTGGT 787936 29 100.0 36 ............................. GAGATAATGACAATCAATTTTAAGCTTAGATTCTTT 787871 29 100.0 36 ............................. TCAAGAATCTATGAAAACACTTGATGATGAGCTGGC 787806 29 100.0 36 ............................. TTAGTAACTTCGGTCAAAGGAAACTTTTCGCCACAA 787741 29 100.0 35 ............................. GCTACATCCTCAAATGTTCGCCCTGTTTTGCTAGA 787677 29 100.0 36 ............................. AAAAAAGAATGAGTTTTGCAAATACCTGTATATTCT 787612 29 100.0 37 ............................. TATTATAAATATATGATTGAAAAATGTGATATAATAT 787546 29 100.0 35 ............................. AAATCAATGAAAGTACTTTCAATATCTGGAAAAGG 787482 29 100.0 35 ............................. ATAATTACATACTTTCTCGATAAAGGATTCAACTA 787418 29 100.0 36 ............................. CCTTTAGGGTGTTGATATTCAAGTTCTTCATGCTGC 787353 29 100.0 36 ............................. ATAGATGCAAAAGGCAAATTATATGTGAGCTTTAAG 787288 29 100.0 36 ............................. CTGCAAAAGCGTTCAACAATAACACAATCAGAAATT 787223 29 100.0 38 ............................. GATTTTAAAGATACTATTGATGATTCTATTCCTAATGA 787156 29 100.0 34 ............................. TCAATCTTTCAAAGTTTCATAAGGTTGAAACCAA 787093 29 100.0 35 ............................. GTCTGCTGATGTAGATATCACTCTGATGAGACTGA 787029 29 100.0 36 ............................. CCCATTATGCTACAAAAGCAATTTCTTTTGCTACGC 786964 29 100.0 37 ............................. AGGAATTAATTGATGAAGGAATTCAAGCAGTTAAAGT 786898 29 100.0 35 ............................. GAATTCCCAGTAGATTTATATCATATATTTGCTGA 786834 29 100.0 35 ............................. CCAAAGAATTTTGTCATTATCACGCGATTAAGTAA 786770 29 100.0 36 ............................. CGATATACATAACTACTAACTTGTTTTTTCGTAACG 786705 29 100.0 36 ............................. ACATCTACCTTAATATTAAACATCTTATCCCTAAAA 786640 29 100.0 35 ............................. AAGATCATCTTCATGCCATCTTGTCATAATTAATA 786576 29 100.0 35 ............................. CCATGTGTTAATTTCATCTTGTTTATTCCTCCCTT 786512 29 100.0 35 ............................. CACTGTTAATATTCTTTGTTATACTGCTAATACAT 786448 29 100.0 35 ............................. TTAACTATCTGTTACTCAATTACTAGAGTATTACC 786384 29 100.0 38 ............................. ATTCTTGTGTTATTCATGTCTGTAACTGTCACTGTTTC 786317 29 100.0 36 ............................. TCATAATAAATCTTGCCTATATACTTTACATTTTTT 786252 29 100.0 36 ............................. AAATATAGCACAAAATCAGCACAAAATCAGCACAAT 786187 29 100.0 36 ............................. GATGATAGAACTATTGGGTCAAGAAAAAACACGTAG 786122 29 100.0 38 ............................. TGGAAAGCAAAAAAGGTTCTGTTGAAAAAGCTAGACAG 786055 29 100.0 38 ............................. TATACAGCTATTTGGTAAGTATAACACTTGTCGCTTAA 785988 29 100.0 36 ............................. TGTAAATAATGTTTTAATATGTACATTTACATATGA 785923 29 100.0 41 ............................. TATCAATGCTTTGGAAAATTTAAAGATAATGATGAATGTGC 785853 29 100.0 35 ............................. CATCATTAAAACCATTAATCTGAAAATAATCATCA 785789 29 100.0 35 ............................. GGGACAATATCGAAGTTAATTTGGTACTTACCGGG 785725 29 100.0 36 ............................. ATTAACATATAAATTATTGATGACCTTAAAATATTA 785660 29 100.0 36 ............................. GAAATAGAATTACTAGCTATTGTTTGTATGATTTTT 785595 29 100.0 36 ............................. CGTACTGTATTCATTGACCCGAAAGGTAAGTCATAC 785530 29 100.0 36 ............................. TTGAAAGATATGTTAGATGTAGATGATGTTGAATCT 785465 29 100.0 37 ............................. CTTGCTTTTGATTAAGTCCATGTTTTTCAGCAATAAC 785399 29 100.0 36 ............................. GAATAACAGCATTACCTGATTTGATGACGGTCAGCA 785334 29 100.0 35 ............................. CACTCATTATGACAATATCTAATGTTGCAAATTCT 785270 29 100.0 36 ............................. TATATAAATTTGATTAATATTTGTAGGTTTTGTAAT 785205 29 100.0 36 ............................. TAGACTGTTGATAAGTTTGGGTTGCTTTTAACTGCC 785140 29 100.0 36 ............................. GAAACACCAGAAAGAAACATAATTTTTATTTTCCTA 785075 29 100.0 36 ............................. AATAGTCTCAATATCCGTTCTGACTGATTCGCTATT 785010 29 100.0 37 ............................. CGGAAAGAATAAAGGAATAAATCCGTTCTTTCCTTCT 784944 29 100.0 37 ............................. GATAATGATAAAATTAAAAATTTAGCTGATGAATTAA 784878 29 100.0 36 ............................. TAATAATTCTAATGGGAAATCTTTAAACAATGCACT 784813 29 100.0 35 ............................. ATTTAACTATTGGCGAAAATGAAAGGGGTTATTTG 784749 29 100.0 36 ............................. ATGTTGTTAACAATGTTGATGTTTCTGGAGTTCAAA 784684 29 100.0 36 ............................. ATTGAAGAAACCTACGATATAGATTTTAACGAAACC 784619 29 100.0 35 ............................. GTAGATTATTTGCGCAAAATTATGCCTGCAACTAC 784555 29 100.0 36 ............................. TCATCAGGCCCAATCTTAATACCGTTATAAACTTTG 784490 29 100.0 36 ............................. TATCCCTGTTTTACCTGAATCTGTGGCCTATAACGA 784425 29 100.0 36 ............................. TTTGGATATTTTGTCTTAATTGCTGTAATGTAATTA 784360 29 100.0 36 ............................. TGTGTGAAGCCTTCTTCATCACCATCTTTTATTGCC 784295 29 100.0 40 ............................. CCATATATACTAGCCCAACTCATTCCATTATTATTTTGCA 784226 29 100.0 35 ............................. TGTTATCCATCCTGCATTATATTCAGTTTGAGTAA 784162 29 100.0 36 ............................. ATACATAAGAAACACGTTGGTAGTGTTAAGTATGGT 784097 29 100.0 36 ............................. TTTCAAAAACTTTTTATCAAAGAAGGGGCCGTAGCC 784032 29 100.0 35 ............................. GAAGATCAGCAGATCGATCAGGAAGATCCGAATTC 783968 29 100.0 36 ............................. TTGCAAGAATGGAGTCAATAGAATCATTATTCCCGT 783903 29 100.0 38 ............................. GCACTTGAAACACTTTCTATTTGTTCATGTACCAGCTT 783836 29 100.0 37 ............................. GGGTAACACCCGGGGAAAAAACCTTTTACAAGTGGAG 783770 29 100.0 35 ............................. TCAAAAATAATTATTAATAATGAAAGGAATTGTGT 783706 29 100.0 37 ............................. ACTATTCTCGAATGTCTTTGATAGGGGTACAACTGTA 783640 29 100.0 37 ............................. CAGTTTACGCACTTCCAGCCTTTTTGCATTACACACC 783574 29 100.0 35 ............................. TGAATGCAGAAGGGTGAGGTAAATGGCTAGAAAAA 783510 29 100.0 38 ............................. TTGACATATGTATACACTAACTTATCAACAAGACATAC 783443 29 100.0 37 ............................. AAGAGTTCATGAAACTATCAAATGAGGAACAGCTTAA 783377 29 100.0 37 ............................. TTCCATACAGGCTCATATAATTCGACAAGTACTTTGT 783311 29 100.0 35 ............................. CTTTTTAGTTATATAGTGTTACAAAATCTAATCAG 783247 29 100.0 36 ............................. AGCAAGCCCCATTATATTATCAATTTAAAAAAGGAG 783182 29 100.0 36 ............................. CTGACTAACTGTATTCGATTCAGTATTGTGTTTAGA 783117 29 100.0 37 ............................. GCTTTTTCTCCAAATCTTTTAAGCATATGATAATAAG 783051 29 100.0 36 ............................. ATGCATACCGGAGATGCTTTTAAAATGCCAGGTATT 782986 29 100.0 36 ............................. TTTTGAAATATAACCATCTTGACCCTTTAAATTAAA 782921 29 100.0 37 ............................. TTTATAGGGTACTTTACTATCATCATTTTGATGTACT 782855 29 100.0 37 ............................. GTTATAAAAAAGACTTCTATAACTCAGAGTGAAATTA 782789 29 100.0 36 ............................. TACACTTGTATTTCTTTCACGACCTCTAGTGTAAAT 782724 29 100.0 36 ............................. GACTTTAAAAACGATATTGATAATAGTATACCAAAT 782659 29 100.0 36 ............................. TTAAGAAGCCAAAATTTCAAGAAAAACTGTTTATAA 782594 29 100.0 36 ............................. AAATTAAAAACCTCCTTTTTAGAACAAATATTCTTT 782529 29 100.0 35 ............................. CTTTTATGTATATATCTATATAATAAATTAATCAA 782465 29 100.0 36 ............................. TATAGCAACCAATTCAGCTTAAGGCTTTCGTTGTTA 782400 29 100.0 35 ............................. TCAACCCCAAAAACCAGATCTGTCAAGTATCTTGC 782336 29 100.0 35 ............................. GACCTCAAATAACCAGTAAATAATTCTCTTACCTG 782272 29 100.0 37 ............................. ACAACTTTCATCTTCGATGCTATCAATTAGATTTCCG 782206 29 100.0 37 ............................. GGACGAAAATGATAATATAAAAATTGCTCGTGAAAAT 782140 29 100.0 37 ............................. AAGTATACAATAGTTATATTTGATGAAATTCAGAGTA 782074 29 100.0 35 ............................. ATGTCACTTGGAATAAGTATGCTACCTCTATTCAT 782010 29 100.0 35 ............................. GTAATAAGCGAATAACCTCGGCTTGTTGTTTGGAG 781946 29 100.0 36 ............................. AATTGAAGTTGAGGGCTATAAGGTAGGAGGATTTGT 781881 29 100.0 35 ............................. TGTTTTGGAGATAGTCATTTTGAGTTTTAGGAGTG 781817 29 100.0 37 ............................. CTGATATATCAGCCCAATGGTAAGCCTCTTCCATTCC 781751 29 100.0 36 ............................. ATTTCTGATTCAACATATGGAGGCAAACCCTAGAGC 781686 29 100.0 36 ............................. AAGAATGAGGAATTCAGAGAACTTGTAAAGTCTTTA 781621 29 100.0 36 ............................. GACGAATGGAGAACGTCAAGCGATGACCGCCAATGG 781556 29 100.0 36 ............................. ATGGCACCGGTTATTTTATTGCTGCTTACCACCATT 781491 29 100.0 37 ............................. AAAATCAATTAAAAAATGGAGGTAAACGAAATTATGG 781425 29 100.0 35 ............................. CAGCAAAATTGAAAATGCCAATTTGGCTTGACGAT 781361 29 100.0 37 ............................. ACTAAGGATAGTCATGTAATGGTCATCATACTTATAA 781295 29 100.0 36 ............................. GGACACAGTACAAAAAGAATCAATCAACTAGCAGAG 781230 29 100.0 35 ............................. TCTCGATAGCAAGCTTTTCCTGAGTCGCTGCATCA 781166 29 100.0 36 ............................. TATATATAGCACTATAGGGATGTTCTACAAGCAGGT 781101 29 96.6 35 ..................C.......... TCTCTTACCATAGGGCATCCATACTCAGTTATCCA 781037 29 100.0 36 ............................. TGGGGAAACATATACATACAATGTACAAAACCAACG 780972 29 96.6 36 ..........G.................. GGGCATGAATTAAGAGTAGTTACGATGTGTATCGGT 780907 29 96.6 0 .................T........... | ========== ====== ====== ====== ============================= ========================================== ================== 169 29 99.9 36 GAACTGCCTTAACTATGCGGGATGTAAAG # Left flank : CAAGTACCTTATTGATGACGAAATATATAAACCGTTGAAAGCGTGGTGGTAAATATATTTGTTGTATTAACCTATGATATTGAAGTCAAAAAAATAAATAAAGTAAGGAAATTGCTAAAAAAGTATTTGGTTTGGACACAGAATTCTGTTTTTGAGGGTGAGATTACAGAAGGTAAGTTGCAAAAATGTATAGGACAGATTGGCAGAATAATTGACAAGAACGAAGATTCAGTGTATATCTATACAATAGATAATCCAAAGAATATTGTTAAGAATAAAATTGGAAAAGAAAAGGCTTTAGATGAATTGATTTTATGATTTTGCAGCAAAGCGTTTTTTAAACTTAAGTCCTATAACATCTTTTATATGAGTGTTAGAAGGAATTGTGGAATTTTATTACAAACACTATTGGAGGCTTACTGCAGTTTAGTTATATTTGAAGGATTGAGAAAATCCTGAATAAGGCTTAAATAGAGCCTTTTAAAATTCAGTGAAAATGG # Right flank : TGAAAGAAATGAAGGGTTAAACATGATTAATGAAGGCACGATTTACACAGGCGTGTGGATTATTTCGATAATTCTTTTATCCTTTACACCAATCCTGTATAGCTTTCTTAGAAGTATCCTGTGATTTATGTTGTTCTATGGCTATTATCGGTTTTTGAGGTGTATTGAGATTTATGAGTGTTTTTGCAAACGTCATTTATGATTTGTTGATCTGTATGGTCTAAATCCAAAGTTTTGAGGATAGAATTTTGCTTCGCATATTGCTCGGTTATTATTCTTATATACTCTTGAATTATCTTATCAATGACAGTTGTAATTCCATCATTTCAGGCTGCAACGAGCAATACTACCATGCCTCAAGGCCTCAAAGAAAACCATTACTTTGATTAAGTCAAAATATACTTTCCTTCAATTCTGGTAATTGCTCCTCCACCAAAAAGTACTCGTATATTTCCATCTGCATCAACTCTTGTTTTAAGCTGTACAATATTGAATCTATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACTGCCTTAACTATGCGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //