Array 1 1856880-1859093 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015206.1 Pediococcus acidilactici strain ZPA017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1856880 36 100.0 30 .................................... AATTTCGATTAATGTTCGCGAAAATCAAGT 1856946 36 100.0 30 .................................... TATTCCGTTTTTGATAATCAAGAATTGTTC 1857012 36 100.0 30 .................................... ATTTCCACTAGCAATATCTACTTAATTTTC 1857078 36 100.0 30 .................................... GATAACTTCGCTATCACGTTCATCGTTGTA 1857144 36 100.0 30 .................................... TAGTGGCGTAGCGTGCAAAATGGTAACCAT 1857210 36 100.0 30 .................................... AGATTAATTTAGCAATCATTCTAATAGCTC 1857276 36 100.0 30 .................................... AGTTAAGATTACGCCTAAGCAAATGGAATT 1857342 36 100.0 30 .................................... TAAAAACAACCCGGATAGAATCACCGACAA 1857408 36 100.0 30 .................................... CAATAGCCGGTGCATTGTCTTGTTTCTCGT 1857474 36 100.0 30 .................................... GCTGCTACAAGTCCCCAAGGGCCTAGCGCT 1857540 36 100.0 30 .................................... TTTCATATATTTTTTCATAATATTCTTGAG 1857606 36 100.0 30 .................................... GCACTACAACCGGGCTAGCACGAGTGACAA 1857672 36 100.0 30 .................................... TTCGTTTGGTGAATCTGGGTGAACGTGTGC 1857738 36 100.0 30 .................................... GAAGCGGACATTGCTTCGGCAAAGGCGGAA 1857804 36 100.0 30 .................................... ATTTGGACCAATGAATTCGATAAAACGACT 1857870 36 100.0 30 .................................... ACCAAGCCATACCGCAGTAATGAAGGACGC 1857936 36 100.0 30 .................................... TGATTGATTAATCAATGTTTTAAGAATCGG 1858002 36 100.0 30 .................................... CTCAAATTGTTGAAGCGAATATTAAGTTCG 1858068 36 100.0 30 .................................... TCGGGAATGTCGTCAACTTCCGTGGCGTGT 1858134 36 100.0 30 .................................... CTACTGACTACAGCCTAACCCTAGGCTAAC 1858200 36 100.0 30 .................................... ACGTAGTCGGCATTATTAATACGGTATTGA 1858266 36 100.0 30 .................................... GAAGCAAATAAAAACACCAAAAAGGCGTCT 1858332 36 100.0 30 .................................... AATCAATTTTGGGATAGCACCGGTGGTAGT 1858398 36 100.0 30 .................................... AAGATTGATTATGCAAGAATGACTGAAAAA 1858464 36 100.0 30 .................................... CCCATCAACAACCTAACACGGGGGCAAGGG 1858530 36 100.0 30 .................................... TTCATCATAATGTTGAATATAGGTATCCCT 1858596 36 100.0 30 .................................... TAGGCAGTGTTGCATTTGCCGCAATTCCGC 1858662 36 100.0 30 .................................... GATAGGCTTGGAAATGATAGATAACAACAT 1858728 36 100.0 30 .................................... ATTTATCATAATTATATCCACTACTTAAAT 1858794 36 100.0 30 .................................... CTAATTACCTCCTTCGTCTACATTAGCTTG 1858860 36 97.2 30 ........G........................... TGCCGGCATCGAGTGTGCACTGTTTGCTCT 1858926 36 97.2 30 ........G........................... TGATGCATTTCCAGAAGATGAATACTTGAT 1858992 36 100.0 30 .................................... ACAGCAGATTGTTGAAGTGTTGCAATACTT 1859058 36 97.2 0 ..................................G. | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAGGACTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGATGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTGATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CGTGGCTGGTTAGTTTGGGTATCTAAGGGAGTTTTCAGAAGGGGAATAAAGTTAAATGGAAGTCATAAAAAAGAGCCAAACAAGAATGAAAGGTTAACAATATTACTGGCGGTAATACAAACCATAATAAGAACTCTAGATTGGCTCGGGTACAGTTTTAAGAAATAGGATTAAGAGACGTAGATCTTTTTTGCCGCTCTCTATATATATTTTATAACGGAGGAATAAAAAAATGAAAAGAGAAAAAGCAGTTAACATAGTTATTGTATTGCTGTTAATTTCAATCGTGTTATCTATTTTAAATCTATTTAAGTAGGTGTGTATCGTGAGTTTAATAAAGAAGCACCTAGATTCTTATAGGATTGCTAAAGATAATAATATTACCTAGCCAATAATGACAAGGGGAATTAATAAGGACTTGGATAACTTATCGTTTAAGCATCTTAAAGCTATCTCCACTTCCCTAGGAAAAGATATAGTAACTTGTCGCAAAAGAATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //