Array 1 67647-65667 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXEY01000006.1 Lactobacillus acidophilus strain P2 scaffold6.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 67646 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 67585 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 67524 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 67463 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 67402 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 67341 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 67280 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 67219 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 67158 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 67097 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 67036 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 66975 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 66914 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 66853 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 66792 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 66731 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 66669 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 66608 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66547 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66486 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 66425 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 66364 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 66303 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 66242 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 66181 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 66120 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66059 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 65998 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 65937 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 65876 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 65815 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 65754 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 65693 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //