Array 1 394862-394171 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQV01000001.1 Actinomyces procaprae strain dk752 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 394861 37 100.0 36 ..................................... TGGTGGGCTCAACAGTCGGTTCCACCGTCGGCTCGG 394788 37 100.0 35 ..................................... CTGACAGACTCTGTCCATTACCTCATCCAGGCTAA 394716 37 100.0 36 ..................................... CTTGGTAGACGTTTCACCTACCATAGACACATACCC 394643 37 97.3 34 ........................A............ GCTATCCATGACTCCTCCTGAAGCCACTCTTCCA 394572 37 100.0 34 ..................................... CAGCCTTACGGGTAGCCTCAGGTACCGGCCATCC 394501 37 100.0 37 ..................................... TTTTCGACGTAGACGTACGGGACGTGGTGCTGGTGGC 394427 37 100.0 36 ..................................... ACGTCGCCGTTGATCTCGGTGCCGCACATGTCGCAG 394354 37 100.0 38 ..................................... TTTCGGGCTTCAAATGCCTCCTGCTTGATGCGCTTGGC 394279 36 97.3 36 ..........-.......................... CCCAGCAGGTGGCTCGCGACGCGCTCAATGAGATGG 394207 37 94.6 0 ................................A..G. | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 98.9 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTGAGAC # Left flank : CCCCCAAACACGAAGCGCCGGTTTGCGGTCTGCTGCGCCGCTTAGTCGTCTGCTGTGTACATCCGAGTTGTTCAACAGAGCGTTGACTGACGTTGTTGACGGTGAAGTGGCATGGTGATTGCCCGGCTGGGCGGTGGTGGTTGTGGTCTCTGCCGGGGGTGCCTGTGGTCGGCTGTGGGTGTCCGGAGGTGCGGAGAGCTGCGGTTGCGGGTGTGGCGTGTGGTGTTGTTGGGGCGTGTGTGACTGGTGCGATGCGCGCCCGGTGGTCACGATTCGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTCTGAGGGGTGTCGGTGGCGCTTGGCGTGTTTTCAACGAAAAGTGGTAGTTTTGGGTGGTGCTAGCCGGTCCCGTGGGGTGCTTGCGGGGCCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGACGCGGTTTCCAGGGGCAGGG # Right flank : TTTGTCAGGCATGGTCTCGGCGTCGAGGTTGTAGGGTGCTTCGCGTTTGAGGGCGTGGATGAAGCCGGGAGTCGGCTCGCCCGCGCGCTTAGCGCTGACGTCGTCTACTACGCCGGTTAGGTGTCCGCTGAAGGGTTCTGAGCTCTTAAGCGGAGGTCTAACTGGCGTAGTAGAGGCCGAAGGGGCGTACCCAATGATCGGGCTGCGGCCTCAATCCCAGTCGCTCTACGTCCGCGACGCCGCCCCACCTCAGATGCTCGCACCGCCAACCTCCATGCCCCCACGAAGAGGCGGTTCATCGTCGGGCATACAGGCTCTTCGTGTTCGGGGGCGTGGTGGGCTGGGTGTGGTGGTTCGCCGGGTGGTGGTGGGCACGCGTACCCCGGCGGCGCGGTACGCGGTGCGATGGACGGGTGTTGGGCTGGGTGTCCGCTGAACCACGGCGGGCCAGGCACGATAGCTCCTGCGTTCGGGTCGATGAGGACGTCGTCCTCCTGCAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 166111-168164 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQV01000007.1 Actinomyces procaprae strain dk752 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 166111 36 94.4 35 ..........T.......A................. TCAGCGTTCTGCGCCGGGAGCGATGCGGTGACGAG 166182 36 97.2 35 ..............T..................... ATGAACGTGTTGTGGCCGCAGTACACGCAGCGCTT 166253 36 97.2 36 ..............T..................... AACAACCCCGCCCGGGTAGCCGCCTTCTACGGCCCC 166325 36 97.2 36 ..............T..................... AGGTAGTCGGCCCACACGGGGCCTTGGGCGTCGCGG 166397 36 97.2 36 ..............T..................... AGTGCGCTGTTGAGGCTGCCGTCGTATTGGATGGCT 166469 36 97.2 35 ..............T..................... GATTCGGTTTCTCGCAGGCCCTTGAGGAAGTTGGC 166540 36 97.2 36 ..........T......................... TGCTAGATAGTGACGGCGTGGCACATGCGCACCGCG 166612 36 100.0 36 .................................... GGCACGATCGCGCTCTTCGTCACATTGGCCGTCTTG 166684 36 100.0 37 .................................... TTTACCAGCTGCTCTGCACCATTGCCTCCGCGGCCCA 166757 36 100.0 36 .................................... TGGCCGCCTGCTCCAACACCACCACACCAACCCCCA 166829 36 100.0 38 .................................... AGCTTCCGGGGTATCGACTCTGTGGTCAACGCCGTGGG 166903 36 100.0 37 .................................... GCAGCGGACCACAGCTTCTTCATGCCAGCCTCTGTCC 166976 36 100.0 36 .................................... CGACTGCCACGGCCGGCGCGCCCCAAGTTCCCCCGC 167048 36 100.0 34 .................................... TCTTTGATCGATAACGCAACTGCTGTACCTGCTA 167118 36 97.2 37 ...................................T CACTGGTCGTACTCGGCGTCGTCGATGGCCTGCCTGG 167191 36 100.0 35 .................................... GACCTTAAGTAGCAGATCACTGGCGTCTGCCTTGT 167262 36 100.0 36 .................................... ATGAGTGTCGTCCTCCTCGTCGATCAGGCCCCGCAG 167334 36 100.0 35 .................................... CCGCTGCCCTTGTAGGACGAGTTGAGGACGTGCTG 167405 36 100.0 37 .................................... CCCGCTGACATGTATTAAGTTACCCGCCCGGCCGGGG 167478 36 100.0 36 .................................... GGTCATGAGGATGTACTGCACCATTTCGACGCCCGC 167550 36 97.2 37 .................T.................. GTTGAATGGATGATGGGCCTCCCCGACGGGTGGGTAA 167623 36 100.0 35 .................................... AACAGCCGCGAGCGTGCCGCCACTCGCCGCCGTTG 167694 36 100.0 37 .................................... TCGTAGCGCTCAATCCCCGACGCGGACACGGGGTGGG 167767 36 94.4 36 ...................T..............A. GACCACACCTTCGCCCCGCCGAAGAGCGTGTCCGTA 167839 36 86.1 39 ..........T.C.G.G.A................. GGCGCCTTACGGGCGTGGTGCAGGTGGCTGACCCGCACC 167914 36 100.0 36 .................................... AGCATGTGCTGCATCATCTTCCAGGTCGTCGCGCTG 167986 36 83.3 36 ..........T.C.G.G.A.A............... TGGAGGACTGTCTTAGTCCACGAGACGACAATGTCG 168058 36 86.1 35 ..........T.C..GG.A................. TCCCAGGAGCCGGCACGCAGCCACGTGGCCGCGTA 168129 36 97.2 0 ..................................A. | ========== ====== ====== ====== ==================================== ======================================= ================== 29 36 97.2 36 GTCTTCCCGGCCTTCATGGCCGGGCTCCATTGAGGC # Left flank : ATGCTGGGGGAGCTGGATGACTACACGGCGATGGTGACTAGATGAGGACGAACCGACGCCGGTATCTCATCGCGTACGACATCCGCAAGCCTGGGCGGCTGCGCCGCATCTGCAAGCTGATGGAGGCGAACGGTGAACGGCTCCAGTACTCTGTGTTCATCTGCGACCTGAACCGGACCGAGCTGGTCCGCCTAAGGGCTGACAGTGAGGAGATCATGAACCTCGACGAGGACTCGGTGGTGATCGTCGACCTCGGCGAACTGGGGGAGGACCGCTTCACGTTCGTCGGTCGGCGCGCAGGGCTGCCCACCCAGGGGGCCCAGATTGTTTAGCGAGCGCTCCGGTGCTGCCTTGATCCCCGGGGAGCGCTCGAATGCTCGGTATGACGGGGTTTTCTGGTGGTCGGCGGACGAGCTGGCGCGATTGACTTGTCCGTTTCTGTGGCAGCGCTCGCGAGACGGCGTAGAATCCTTGACCAGCCGCGGCAAAATCCGCGAGCT # Right flank : CAGAATGATTGCGCGAATGCGCTATCTGTCGGCTCTTCCGGTTTGAGGGTGTGGCTGGGCGGGTGCGGGTGTTGTTGGCGTTGGGTGGTGAGTGGTTAGGGGCCGGTCGGGTGAGTGTCCCTCGGGGTGGCGCACGCTCAGCCATCTTGCCGCTCTGACGTGACAGCGAGTTTTGCCTCGTATTTCAACGTTCTTGGTTTTGGTTCGAAGGAGGCCATTCGGTTCCCACGTGCGCCGCGGGGGTCGACGCACGTGGGAACCGAACGCCCCGTTCGCCGGCTGAGGTGTTTTCCGCATGATTCCGCCAAATCTCTAGAACAGCGCCGCAACTGAGCGTGCGGCGCGCTCATCGCCGGACCCACCTGTGCGCGGGTTCGGCGCTTGGCACTTGAGGACGTGACCGCGGATAGCGCCCGAGGCCGTACAGACGACGGGGCGCCCCGCGGTTGCGGAGGATCCGCGGACACCGACACGGCCAGCACAACTCGCGCCGAACCTAG # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCGGCCTTCATGGCCGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.90,-15.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 266525-264875 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQV01000003.1 Actinomyces procaprae strain dk752 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 266524 37 97.3 35 .................................T... AAAAAACCTTTTCATCGTTCACGCCCCCTTGGTGG 266452 37 97.3 36 .................................T... CCTCACCTGCGATCCGGATAAACATCCGGTTATTGG 266379 37 97.3 38 .................................T... ACTGGTCACGGTTAGGCACCCACACGAACGGCTCCCTC 266304 37 97.3 36 .................................T... CTCAACCGTAATTCGCATCTTGAACCTCCTGTCCAA 266231 37 100.0 37 ..................................... CCGTCCTCAATGGGGAGTTCTTCGCTCCCCGAAATAA 266157 37 100.0 35 ..................................... AGCTTCGATGATCCAGGTTGGGTCGGGTTGTGTCG 266085 37 100.0 37 ..................................... AGGTAAAGTACTCCACCTCCACGTCCTGGGATTCTAC 266011 37 100.0 35 ..................................... CCAGCTCAACCGGAGCTAGAGGTACAAGATCGACG 265939 37 100.0 37 ..................................... TTCACCGATCACGGACACATACCCCTTGCCGCCTAAG 265865 37 100.0 37 ..................................... CATAATAGACATGCGGCTGCATTGTAAGTGAACAAGA 265791 37 100.0 37 ..................................... CACTTCCCCGCAATACACCTCCACAAAGCTATCGGCC 265717 37 100.0 37 ..................................... TGAGCTCCTTTCTGCCCCACCTGGGGGGCGATCATGG 265643 37 100.0 36 ..................................... GGGTGAGTTGAGTCTCGGCCTCCCCCGAGAGGGGGG 265570 37 100.0 36 ..................................... AACACCTCGGCGGCAGTGGCGGCAGGCGACCTGGTT 265497 37 100.0 39 ..................................... GTGTCGGCTACCAGCCCGGCGTGTCCGCCGTTGTAACCG 265421 37 97.3 35 .................................T... TCAACCGCCTGGCGGATGTACGAGTAGACCTTCGA 265349 37 100.0 37 ..................................... TTGAGGTTGGCGTCGATGCTGTTGTCCATCATTTTTG 265275 37 100.0 36 ..................................... CGCGACCAGCAGCATGATGCTCCTGGCACGAAAATG 265202 37 100.0 35 ..................................... CATCTCACCATCCCACAACAGGAATAGCGGGAACT 265130 37 100.0 34 ..................................... ATGTTGGCGGTCTCGGGCAGGTCACGGAACAGGT 265059 37 100.0 37 ..................................... AGGCAACGCACCCCAACGAACTTCCATGCCCTGAGAC 264985 37 97.3 37 ..................T.................. TGGAACGACGCTCCACGAGAGAGGAGCTTCATCTCCT 264911 37 91.9 0 ................................TG.G. | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 98.9 36 GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Left flank : CCAGGAACGAGGAGAAAGACTGCGGCAAGAGTCAAGACAAGTTCGGCGCGCTGGGGCTCAGCGCGTCCTGGTTCTCCAGGTTCGCGCAGTTGCTGCGGGAGGTTGAGGGATGATCGTAGGCGTGGGACGTCCGTGCGGTGTTGCTGGGAGCAGGCGCGGGCGAGCGGTTCCCCCGGGGCGTGGCGTCGACCCCGAAGGGCGTGTGTCGCGTGTGACAGCTGGTGTCTGTGAGGCGTGCGTATCTGGTGTGGCGTGCGCCGGGAGGTCACAATTCGGTCTACGGTACAAAGATTGGTACGTTTGGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTCTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTCCAACGAAAGGTGGTAGTTTTGGGGTGGTGTCAGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGGCGCGGTTTCCAGGGGTAGGG # Right flank : GCGGCGGACAGCCGCCTGTGGTGTGTTTCGGGCTATCGGCGTTTGGGGGTGTCGTGGGGGTTGTGGCTGGTTTGTTCGGCTCAGCCTTGCGTTTCCAGGACTTTTCTTCGGGGCCTTGGTGTGAACGTGGTGCTTTGGAGGTTCTTCGGGTTTGAGGGTGTGCTGGTTTTGGCCAGGCTGTGCTGCGGTGGTCGTGTTCGGGCGGGTGAGGTCGTACTCGGGCAGTGCCAAGCTGCCGAGAACGTCCTCGTGATCCCCGATCCCTCCACGTTCGTGAGGGACTGGGGTGCAAGAGGACGTTTTCGCCGGGCGCTGGTCGTCCTCGGGTGTAAGTGGTCGTAGTCGGATGAGCGAGGCCGTAGTGGTAGTCGGCCTGGCTCGCCCGGGTGTGTTTGCCGGTCGTCGGCGTCGAATGGACTGCCTGGGAGGCGCTCTCAGGCAGTCCGAACACGGGAACCGCAGGAACACGGCCCAAACAGGGAAGATCGGCGATGGCCGGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Alternate repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTATGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 290618-289139 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQV01000003.1 Actinomyces procaprae strain dk752 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 290617 37 100.0 35 ..................................... TAGGTGGTAGCGTAGTACCCGGAGCTGAAGCGCTG 290545 37 97.3 35 ...............................C..... GGTGCCAGGGACTGGGGTGGTCCCAAAACTCCTTC 290473 37 100.0 36 ..................................... ACTAGTGTGAACAAGCTTCATAGGTTGATTCCTTTC 290400 37 100.0 35 ..................................... GTATTGACGATAGCGTGCATCTCTCGCAGGTTCAT 290328 37 100.0 35 ..................................... AGTATTGGCCTGGGCCGTCCCAGCGCGCGTCTGAT 290256 37 100.0 37 ..................................... GTGTCGTCGTTCATTTTTTCCTCCTCAAGAGATCCTG 290182 37 100.0 35 ..................................... ACCCGCCAGTTCACCGAGACCTGAAACGACTTCCA 290110 37 100.0 34 ..................................... CCCCTTATTTCAAGGTAGCCGTAGACGGCTGGAA 290039 37 100.0 35 ..................................... ACTCACCGCGGCTTGCGATGAGTAATAGACGGTCT 289967 37 100.0 35 ..................................... ATCTGATACAGCACCCACGAACACATGTCTCCCAC 289895 37 100.0 33 ..................................... GTTCCTCGACAAGCTTGATGTCGATGTCGGCGG 289825 37 100.0 36 ..................................... TGGTCGTCCCATCGGAGACCCTCACCCGCTTCAACT 289752 37 100.0 37 ..................................... GAACGTGCCGGCCGCGCCGCGCGGAGCGCAGCGCTAG 289678 37 100.0 37 ..................................... GCTCTGCTTCACGGACGTGGTGATGGTGTTCTGGTAG 289604 37 100.0 35 ..................................... ATGACCGACATCGATTTTTTGTTACGCATCGTCGC 289532 37 97.3 36 ............................T........ TTGGTGACGCGACGCTGGACGCGCTCGGCGGAGACG 289459 37 100.0 35 ..................................... CTAAGGACAGCGCCCATGCGATCCAGGGAGATTCC 289387 37 100.0 34 ..................................... GAGAAGGAAAGTTTGTTGAGGGCGTGATTGACGC 289316 37 100.0 31 ..................................... CGATTCGCTCTAGATCCTCCTTACTCAGCTC 289248 37 100.0 36 ..................................... CTCCTCGCTCGGCTTGAAGATCGTGCCCCACATGGG 289175 37 97.3 0 ..........G.......................... | ========== ====== ====== ====== ===================================== ===================================== ================== 21 37 99.6 35 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : CCTCTCCAAAGCCAACGGATTCCTCACAGAACCCAGGCTAGTAGGCACGGTGTTGCACTTCTTCATAGACAACGGGGGGGATGTATAGGTGTATTAGTCGTTGGCGTATTTCGACGAAGTGTGTCGTCGTGCGGGGCGTTGGGCGCCGGGACGGGGTGTCGGCGGGAGGCTGGTGGGACCGCGCCGGGAGGGCGGCGAGCGTGTTGCGGGTGTGGCGTGCGGTGCCGTTGGGGCGCGTGAGGCTGGTCTGGCGTGCGCCAAGAGGTTGCGATTTGGTCTACGGTACAAAGATTGGTACGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGCCTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTGCAACGAAAGGTGGTAGTTTTGGGGTGGTGCCAGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGGCGCGGTTTCCAGGGGTAGGG # Right flank : CCGCAGGCGTATCGAATCGCTACGCCGTTGATAAGGGGCTCTTCCGGATTTAGGGGTGTGGGGTAGGCGCGGGCGCCTCGGTCTGGTGTGGTAGTGACTCGGGCCTGGCTGGTGGGCCTGCCCGGTGTCAGTAGTCGAACCCGCGGGCTGGTCGCGCGTGTCGAGCCCAGGCGTATACGCGCGGACAGCTGGCGTTCGGGGTGTGAGTGGTGGTGAATGTCCAGATTCGGGACAAACGGTGCGGGCAGCGTCCCAGGCCACGACCAAAACGTTGGAATCATGCGGGTTCCAGAACGACTCACGCCCACGTGGGCGGCGTTTGTCCCGAATCTGGACACTTTTCCGGGATGTGTGGCAGCAGCGAGCGCCGCCGCAGGCGTACCCGCAGGTGAGTAGAGCAGCACGCGAGCCACGCGCCGGACAATGCACCCTCAAGCTGGAAGAGCCCGTTACGCCGGGGCTTGCCTTGCGGGCCTGCGTTCAAAGGTCCAGCACGAGTC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //