Array 1 130647-130285 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063817.1 Clostridium botulinum strain Stockholm plasmid p1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 130646 29 100.0 38 ............................. TTTAGTAAATCTTTTAATAAAACTTGTCCTGAAGGTAA 130579 29 100.0 37 ............................. GCAATTTTTATAATTAATTGTTGTGTAGCTGGACTTA 130513 29 96.6 39 ................G............ TTGCATTTGAATTGCATTTAAATTATCTTGAGATTTTGT 130445 29 96.6 36 .........G................... ACCCAATATTCATATAGTAGGTTAAGGTCTTAAATT 130380 29 96.6 38 ................G............ AAAGTATAATAATATAAACTAGCACACGTAAATTGGTA 130313 29 89.7 0 .........G.............TA.... | ========== ====== ====== ====== ============================= ======================================= ================== 6 29 96.6 38 GTATTAATTAAACTATATTAGTTATAAAG # Left flank : TGGCTGGGATATTGAAGATTATTTAGAAGTTGGTAAGTGGGAATTAGTTTAGAATCTTAAAATATTAAGAATGTGCTTGATTAGGGGGATTAAGAATGGAAAAATATAAATATGTTATAAAAGTTGGATACAATAAGTATTTGCAGTTTATAGATGACATAGAAGATTATTGGCTAGTTAATAATAAGAAATTGGCTAAGGTATTAAGTGAAGAATGGTATGAGAAAAGAGTTGAGATATTAGATAAATTAATAGATTTAGGATTAACTATACCTCATTTTGAGAGTGCTTAAAGGTAAAAACAAATAGAGATTTGCAGTGAACCTCCAGTAGTGTTTTTGGGTTAATTTTACAAAAGTGATTGTAAGGTAGTTATATCAATACGCTTAGCTATTTATTATAAAAAACGGCTCACTGCAAAAACACACTATTTATTTGAAGTTTTAATGGTCAAAATATGGGATTATATAGTATAATAGAGATATGCAAAGAAAAATAGA # Right flank : AGGATTAACTTTAAAAAGTTAGTCCTCTTTTTGAATAAAAAATCACAAATATTAATAACTCTGTGGTAATTAGTGAAGAATTATTATATAATAGCATTAAAAGGTAAATTTTATTTATAACTGATTGGAGATGAAAATATGGAGATATTACTCGCGATAATGGCATGTATAGTTGGATTGTTTATTTATATAATCGTTAAGGATGAAAAAAGAATCAATGCTGAAAAAAATGAATATGATATAAAAATAAATTGGCTTTGTGATTACATTGGAGGTATACCGTTATTTGATGAGAATAAAAATAATATAGGCAAACAAATGGATGTGCAAGTTAGGGGTAAAACTAATAGCTTATATATCAAAAGCTTATCTAACGCAAATGAAATAGATATATCTATTAATAATATAACAAATATGGAATCTAAAACTAAAGAGCAAATAATAAGTAAACAAGTAAGTCCATCATTGACTAAAATATTAACTTTTGGGGTATTTTCAAT # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAAACTATATTAGTTATAAAG # Alternate repeat : GTATTAATTAAACTATGTTAGTTATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 548617-553294 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063816.1 Clostridium botulinum strain Stockholm chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 548617 30 100.0 35 .............................. AGGTAAAAAACACATCTTAAACCGTTGATATATAA 548682 30 100.0 35 .............................. TCCATATATCTCCTTCATTCATTTTTCCTATATCC 548747 30 100.0 34 .............................. TGTCTAGCGAAGTTTTATAATGCATGGTTTTTCC 548811 30 100.0 34 .............................. TCAAATCAAATCGATATTGTTTCTAAAGTATCAA 548875 30 100.0 36 .............................. TGTTACGGCATTTAAAATAGGTACTAAGTCCAAAGT 548941 30 100.0 37 .............................. TACCTATAAACACCAATTCAATAAAAAAGGAAAGCAA 549008 30 100.0 35 .............................. ACAAATAAAAGGTAAGCAGTCTATTATGTATTATA 549073 30 100.0 36 .............................. TAACTGCACTATCTGTTAAATCTTCATTTTTATTTA 549139 30 100.0 36 .............................. CAAAGAGTAAAATTTGGAACAACACCAGATCCAGAA 549205 30 100.0 36 .............................. AGCGTCAAACGCACTTCATAACGAGTGAGTGGGTCG 549271 30 100.0 35 .............................. TATATCTTTATGCCATTTGAACGCTCACCAACATA 549336 30 100.0 34 .............................. AGCCACAACCCCACGCTTCGCAACTGTATAACAA 549400 30 100.0 36 .............................. ATAGTTAGACGAGTGAAAATTGACATAAAAAATACC 549466 30 100.0 35 .............................. TTTACAAGCTTTTCATATTGTTTATAAACTCTTTT 549531 30 100.0 37 .............................. ACTTTGGAAAGACTGTTTAAAAGTCGATTATACGCCT 549598 30 100.0 36 .............................. TCTCCAACACTAGTACCGTCAGGCAGAACATAAGAC 549664 30 100.0 34 .............................. TTAGGTAGAAAATTAAAAAACGATCCATGTCCAC 549728 30 100.0 34 .............................. CTATTACAAACAAACCAAAGATGTAGCTACGTTA 549792 30 100.0 34 .............................. TAATCATTTATTAATTTTAAAATCTTATCTATAT 549856 30 100.0 35 .............................. TGGTTAAAACTGAGTTTAGAGCTTCAACGGAACCG 549921 30 100.0 37 .............................. ACAAATGATAGATTTAAGTTGTATTGATGAAAATATT 549988 30 100.0 37 .............................. GGCATAGATTTATCCACGTTGTGATAATCTCCCTCGA 550055 30 100.0 34 .............................. TTTGTACTAGCTTTCATCTGCTCGTTATGATTTT 550119 30 100.0 35 .............................. TTGTAAGGTTGGCTTTCCTTTTTCCCTAAAGTTTC 550184 30 100.0 34 .............................. TTGTGAAAAGGGCACTTAATGTACCCTTGTCTAT 550248 30 100.0 37 .............................. TGAATAAATTAAATAAATTTTTATATAAAGCTTCAAT 550315 30 100.0 34 .............................. TTTTATTGGGATTTGGGAGCATGCAAAAATAAGA 550379 30 100.0 36 .............................. TATAATAATATTTCGTATTATATGTTTTCGGTGGTA 550445 30 100.0 35 .............................. TTTGAATTGTAGAATCTCCTCAAAATAAAAACATC 550510 30 100.0 37 .............................. GAAGGAAATAAGATACAGGATTTTCCTTCACAAGGGG 550577 30 100.0 36 .............................. TTCAAACACTCCTTTAATTAGAAAAGGAGAAATAAT 550643 30 100.0 35 .............................. TTGTAAATGATGATGTATTATATTCAGAGATTACC 550708 30 100.0 35 .............................. GATATGGGAGTCGGAAAACACGCCCTTGTGATTGA 550773 30 100.0 34 .............................. TACTCTCTATTAATTCATCACTATGCTTTTTCAT 550837 30 100.0 37 .............................. TGTTGGCTATTTTGACAGAGCAGTTAAAAGTTCCGAA 550904 30 100.0 35 .............................. GTTATATATTTTATAATTTCTCTTTCTGCTTCTCC 550969 30 100.0 35 .............................. ATATTACTTTCCCAGTTCTTATAAACAGAATCAAA 551034 30 100.0 35 .............................. TATTGTTCCTGATTTAAATTTCTTATGCCATCATT 551099 30 100.0 34 .............................. TGATGAATATTATGAGCAGTTATATTTCAATAAA 551163 30 100.0 36 .............................. GATAAACAAGAAGAAGCTATGATGTTTGCTACAAAC 551229 30 100.0 35 .............................. ATACAATTTGTATCAATTTTAAGAAGGCGAAAAAA 551294 30 100.0 34 .............................. GCGAAATTTTCAGCTTTGTATATTCTGTCCCATG 551358 30 100.0 36 .............................. TCGTATAAATCCATCCAATACGGATTAGGACAATAC 551424 30 100.0 36 .............................. ATGGGCTCTGCAGTACCTTTCGTTAGCCATACTAGC 551490 30 100.0 36 .............................. CTTGCAAGTTTCGCAACTTCTCTTACTAGCAAAAGG 551556 30 100.0 36 .............................. GTTAGAAGTGGAATAAATGAATTAATAGAAAACAAA 551622 30 100.0 36 .............................. AATGTATCTTCTTTTATACGATCCATAGGAGCATCG 551688 30 100.0 37 .............................. TAAGAAATACATATGAAGAAACATTAAATAAATTTTA 551755 30 100.0 35 .............................. TAACGTAGATAAAGGTATGCCTGATGCACAATTTA 551820 30 100.0 36 .............................. TTCATAAAATCTTCATAAAAATGAACTAAAAACTGT 551886 30 100.0 36 .............................. TTTTCTAAGATTGATATTTGGCTGTTATTTTCCATA 551952 30 100.0 35 .............................. ATTTCTATAGATAAACTAGCTATATCTTTTTTAAG 552017 30 100.0 37 .............................. CAGAATTAAAAGGTGCGTATATTAAAGTAGGATTAAC 552084 30 100.0 35 .............................. TCTCCAAAAGTAGTGCTAGTTATTGGAACGTTCCC 552149 30 100.0 35 .............................. TTTTTGGTAGTTGTTCTTTCTTTACCTTTCCTTCT 552214 30 100.0 36 .............................. CTGTTTTTATGTCAATTCCCAATCTTTCTAGCACAA 552280 30 100.0 36 .............................. TTATAAGTAAAATTTTTATAAAAATTTAATATTTCT 552346 30 100.0 35 .............................. ATTTAAAGATGAAGATTACTATTGTCACAAATGTG 552411 30 100.0 36 .............................. TGACCACATGAAAACGTACCACTATAACCTGCCATT 552477 30 100.0 36 .............................. TAAGCATAGTAAGGGAGAAAAAGCAGGGGAATCAAT 552543 30 100.0 36 .............................. TATATTTTTATCCATCTATAGACCGTTGCTCTTCCA 552609 30 100.0 35 .............................. AGGTAATGAGGTAAGTCCTTTGTACTAACCCCCAG 552674 30 100.0 36 .............................. TTATAAGTAAAATTTTTATAAAAATTTAATATTTCT 552740 30 100.0 36 .............................. TTGTATAAATATATAGCTTTTTTCATTTTCAAGCAC 552806 30 100.0 34 .............................. TCTATAAAGTTATATTCTTTAGCTTTTTGAGCAT 552870 30 100.0 36 .............................. AAAAAAATGGACTGAACTTTGGAAAGACTGTTTAAA 552936 30 100.0 37 .............................. GCGCATATTCCTATTGTATTTGTATTATGTCCTTTGC 553003 30 100.0 35 .............................. AACTTATCCTTATCTTGTCCATAATCCATATCTAA 553068 30 100.0 37 .............................. AAAGGAGATTAATTTTTATGGATCTATTTGCATTAGA 553135 30 100.0 35 .............................. TTTTTATATTTGTTTCTAATAGCATCTGCTGCTAA 553200 30 100.0 35 .............................. AGTATTACATTAAAAGATACTACCGTTAGTTCTGC 553265 30 90.0 0 ....................C...C.T... | ========== ====== ====== ====== ============================== ===================================== ================== 72 30 99.9 35 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGATAAGATATAATGAGTAAAAAAATTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAGAGAGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAACTCATTATCAAAAATCTGTTTTTAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAGAAAGTAATAGATGAAAGTGAAGATTTTATATGTATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGTTAGGAGTAGGTATTGAAACTGCAGAGGATTTAATTTTATAAAATTATTATCCCAACCGATTAAAAAATTCAAACTAGTCCCAATCCTTGATTTAACTGTTTTTGAGTGGTATTTTGGTTTAAAAAATTAAATTATAAAAGTTGGTTGGGAAAAAACTAACGAAAGTGTTTATTTTCAATGATCTTAAAGGTATAATATAAATAAGGAATAGCTATTTTACTATG # Right flank : TAAAAATTAGTTAAATACTAATACAACAGTTTAAAATACCCCTATAAGTAAAAACTTATAGGGGTATTTTAGTTATCTGGAGTAATTAAATTTATATTGTGTTCTTCAAAAAACTTAACATACTCTTTAGGTGGAATCCTATCTGTAATAAAACAAGTAATATCTTCTAATTTACAATAAGTTTTAAGAGAAGCTGTATCTAACTTTGAGTGATCAGCTAAAAGTATTACATTGGAACTATTTTCAACTACTGTTTTTTTTACTTCATATTCAAAATTAGATGAATTTGTAACTCCTCTATCAATAGAAAAACCTGTAGTGGCCATAAATGCTTTGGATATATTATAATTCTTTAAAAAATTCGAAGCTTCTACACCAATTAAAGAATTAGTTTCTCTAAAAAGAGTTCCTCCTGTGGATAATATATCTACATTTGAATAAGGCAAAGCCTTTAGTAATATATTAAGATTGTTAGTTATTATAGTTAAATTTTTTCTATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 698000-698525 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063816.1 Clostridium botulinum strain Stockholm chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 698000 29 100.0 37 ............................. AATTGAAGATTTTATTCAAAGATTAACACAAATTCAT 698066 29 100.0 35 ............................. CATTAAATAGGACCTGTGAAAATAGAGGAGATCAT 698130 29 100.0 37 ............................. CTCTTTCCACTTATTTAAATTATTTAATTCCTTGCTT 698196 29 100.0 36 ............................. CGCAGCTATATTAAACAACTAATCGAAAAGGATATT 698261 29 100.0 36 ............................. CTAGCCTTCATTCTGTGCAGAGTTTATAAAACTAAT 698326 29 100.0 35 ............................. CGTAGAAATTGTATCTGCATAAGCAATATTATTAG 698390 29 100.0 13 ............................. CGAGCGGTAAACG Deletion [698432] 698432 29 93.1 37 .....C..........A............ AATTCGAAATATCGGAATATGTCTAATATCTCGAACA 698498 28 75.9 0 .............T....-.T.AA..C.T | ========== ====== ====== ====== ============================= ===================================== ================== 9 29 96.6 33 GTTGAGAATCAACAAAGGATATGTTTAAG # Left flank : AATATACTTAATAAAGATAAAGAATATGAGTTTACTGTTGAGGATGAAGTTATAGCATATGACCAGATTAAAAAACTTTATGAGGCTATGGATAAACTGGAACCATTGGAAAGGGAAATTATTAGCAGATACTATATTAATAATGAAAAATTTAAGGATATTGCAGAAGATAAAAAGCTTTTATATGATAGGACTATTTATTTGAGGAGGAGAGCCATTAGGAAACTTAGAGGGATCATGGAAAAAAAACAATAAATTTAAAATATTATCATATAAAAATTGAATAAATATAATCGTATGTGTTAAAAATATAAATAAAATTATTACCAACCATAAAGGTCGACTTAGCGTCCTAAAATTGAGTAGTACCAATAAGTCTAATAAGATTAGCATGGCAACTCTCAGTAAGCCTCAATTTGATTGGGAAGCTTTGTGCAGATGCTAGTAATAGCAAGGCGTACAATGATATATCCATATTTAAAAATGGCTTAGATACAGAG # Right flank : TATAATAAATAAGTTTAAAATTAGTGTTTATTGGAAATATTATAAATATATATAATATTTTAAGTAAGGAAGATAAAACATGAATAAATGTATAAAAGTATCCATAAAGAATTGTAAGGAACTAGATTATAAAGTTATGAGTGAAAAATTAAGAAATATACAATACTTAACATGTAAAGCTAGTAATAAAGCCATGCAAATGTATTATATGTGGGAGAATCAGAAAATAGATATTAAGAATAAAACAGGAGAATATCCTAATGATAAAGAATTATTTGGAAAAACCTATAGAAATGTAGTTGAAGGTGAAATGAAAACTATAATGAATACCATAAATACATCTAATGTAGGTCAAACCAATGCAATTATAATGAAAAAGTGGAATACTGATAAAAAAGAAGTTCTATCATATCAAAAATCTTTACCTAATTTTAAATTAAATATGCCTATATACATAAAAAATAAAAGCTTTTCAATAGTAAAAGGTACAAGTGGATATG # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGAATCAACAAAGGATATGTTTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 706349-706969 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063816.1 Clostridium botulinum strain Stockholm chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 706349 29 100.0 36 ............................. GTTATTTAAGATACCTTTTACATACTCAATGTTTCT 706414 29 100.0 38 ............................. TCGAGACTGGAGTGGTAAAGTTGCTTTAGTAGATACTA 706481 29 100.0 37 ............................. AAATTAAATGTTGAAAATTCTTGGTTAACGGATTCAT 706547 29 100.0 36 ............................. TGAAAATTGATATTGAATATATAAAAGATAAAGTTA 706612 29 100.0 38 ............................. ATTAAAATTGAAGTACGACTTGTACTAACTGCATCTGC 706679 29 100.0 36 ............................. TGAAAATTGATATTGAATATATAAAAGATAAAGTTA 706744 29 100.0 37 ............................. CCTAAAAAACAAAAACACCCTAGCCAATAGGCTTAGA 706810 29 100.0 37 ............................. TATCCGAATTCAAAGTCGCTTTGTATTCTATCAGCCA 706876 29 100.0 36 ............................. TCTTTCAATATCTTCAACTATATTTGCAGTAGGATC 706941 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ====================================== ================== 10 29 99.7 37 GTTTTAGTTTAACTATGTGAAATGTAAAT # Left flank : TAATTATGAAGAAGGACAAAGAGAATCTCAAGCTGATTTTATATGCAAAAAATGTGGTTATAAAGTTAATGCTGATTATAATGCAGCTAGAAATATCGCTATGAGTAATAAATATATAACAAAAAAAGAAGAAAGTAAGTATTACAAAATTAAAGAAAGTATGGTATAATAAAACATAGTTAAACTAATAAAAACAGGGCGATTTAACGTCCTAAGGCTGAGAGAAGTTTTTTCTACTCGGCAAGGGTTAATCTCGATTGTTGTGTTACCGATCGAGCGTTTCACAAAATGCGAGAGAAATCTCGCATTTTTAATTTTGCAGTAAGGCTAGTTTTTATATAAATATGCTATAACCATTGATATTGCTAGGCTACAATAGGTTTTATTAAAAAAGCAAAAAACATTACTGAAGGTTCACTGCAAAATAGTGTATTTAAGTGAAAGTGAGATTGCTTGTAAAGCTAGGAGTATCAATATATTTATAAATTTCAAAATTTAGG # Right flank : TGAGCATAGCAATAAATTTTGTTTCATTTTGTTTGAGTAAGTTTTAGTAAAATACTATGAAGTGAAGGGATACGTATTATGAAATTTATCGAATCAATAGATCCTTTTTTGATGCAGTTGGTTATTGTTCCGCTAATAGTAATTGGATTAGGTGTTTTAGTAGCTTATAATATTAAAAATATATTAATTGGACCTTTAATAACATTGTTTTTAAATAGTTTATATGAAATTTGGTATATAAAACACTATTGTCCTGGATCAGAAATTAGTTTGAGTTCTTGGAATATTATTCTTCCAATGATTTCATTTACAATTTCTTTGATTGTAGTATTAATTAGAGAATAGGGTAATATTTAATAAAGATTATTTCTTAGGCTAGGTGAAATGTAAATAACCTGGATTTTCTTTAGTTGCAATAATATCAATACTAGGTTTTAGTTTAACTATGTGAAATAGAGAAGCAGAATATAAAAGCTGAAACTACAAAATATCCATAATGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTTAACTATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //