Array 1 18520-24895 **** Predicted by CRISPRDetect 2.4 *** >NZ_UTAC01000022.1 Kocuria rhizophila isolate Kocuria sp. PT10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 18520 28 100.0 33 ............................ CGTCACCGCGCCGACCTGAGTGTAGAAGTTCGT 18581 28 100.0 33 ............................ CCGTGTCCCAGGTCGGCAACGGTGCCGCAATGA 18642 28 100.0 33 ............................ CAAGCCCTACCCGCTGCTGCGGTTCATGGACGG 18703 28 100.0 33 ............................ GCTCCCGGCCGGGACGGTGCTGCGCCACTACCT 18764 28 100.0 33 ............................ GAGATCCGGTGTGCGAACCGCATCTTTCGACCC 18825 28 100.0 33 ............................ CCGGGCAGACACCCGTGTAGCGACCTGGACAAT 18886 28 100.0 33 ............................ ACCCTCAATGTGACTGGGATGCTCCGGGGTCGT 18947 28 100.0 33 ............................ CTGGCCCTTGTACGACACACGGTCGCCGGGGCG 19008 28 100.0 33 ............................ GCCCGTGACGTTCCCCTCCGGGAAGGGGTTGCG 19069 28 100.0 33 ............................ TCAGCCGATTCGTGCTCTGACCTGCGGCTTTAC 19130 28 100.0 33 ............................ CTCACTGGGCGTCTAGTGCTGTAGGGTGCGTGT 19191 28 100.0 33 ............................ CCCCCCGCGTTCGGTGTGCTCATGCTCTGCCCC 19252 28 100.0 33 ............................ CACGCGCACCGGCTTCTGCCCGTACTTCTGGGG 19313 28 100.0 33 ............................ TTGTTTGTCGGGAACGCTTTCTGGTACGTCACG 19374 28 100.0 33 ............................ GTCCGCGGCCGCGACCGTTCCCCCGGCGGCGAT 19435 28 100.0 33 ............................ GATCTACGGGTGTCCAACGCGGATTTGAAGAAC 19496 28 100.0 33 ............................ CCGGTCAATATCAATGAAGTAGGAGTCCACCGC 19557 28 100.0 33 ............................ GTCCTTCGCGTACTGCATGCCCACGTCCGCGCA 19618 28 100.0 33 ............................ CGACCACACCGACCCCGGGCTGTTCCCAGACCT 19679 28 100.0 33 ............................ CGAGATCATCGCAATCCATGCGCTGGTCCACCC 19740 28 100.0 34 ............................ CCCCCCTGGAGGTCTCGAACAAACGGTACGTGGA 19802 28 100.0 33 ............................ CCCCACCGTGATCGTGGAAGCGACCCCCGGGGC 19863 28 100.0 33 ............................ TGCGGGGGCGATGCCCTCCCAGTGGGCGCAACT 19924 28 100.0 33 ............................ TCGCGCCCTGCAGTGCGCCCTGCAGGTCGTCCT 19985 28 100.0 33 ............................ AACCCCAGCCCAGGAGCAACCCCCGATCAAGAT 20046 28 100.0 33 ............................ CGGACCCGTCCACACTGATCGTGTGCTCAAAGT 20107 28 100.0 33 ............................ CACGCGCACCGGTTTCGTTCCATACTTTTGGGG 20168 28 100.0 33 ............................ CTCGATGGACCCCTTCTTCGTGTCCACCAGTTC 20229 28 100.0 33 ............................ TGGAAAACCAACATTCAGGAACTCCCCTACGGG 20290 28 100.0 33 ............................ GCCATCCTCGAGTGAGCCGGTGACGTGGTGCAG 20351 28 100.0 33 ............................ CGCGGCGTTCGGTGCGATCCAGACTGTGGTGGG 20412 28 100.0 33 ............................ GTCCTCCGCGTCCACGGCGGCGTCGGAGTCGAA 20473 28 100.0 33 ............................ GGGGGGTCGGTCGCCGTGGCAGCAAGAGGAGTT 20534 28 100.0 33 ............................ GTCGCGGAATGTGCACGGGAGACCGATGGAACT 20595 28 100.0 33 ............................ GAAGAAGCCCACGATGGCCGGGACCCGATCCTG 20656 28 100.0 33 ............................ GCCGTTGCCGCATGTCAGCGACCGGCATCGCGT 20717 28 100.0 33 ............................ GCGTGGTCCAACAACTCACGGCCCTACGCGGGG 20778 28 100.0 33 ............................ TCCCTGGGGCCAGGACCCCTGAACCTCCACCCG 20839 28 100.0 33 ............................ GCTCGCGCTCGTGTCCACAGGTGTCGCATCTCT 20900 28 100.0 33 ............................ CGCCTCGATCACGAACGCCTTGCGGTCCTGCAG 20961 28 100.0 33 ............................ CTTCTGGGCTCAGGCCGCTGATCCGATCCGCGA 21022 28 100.0 33 ............................ CGTCCCCGACGCGAGGTCCAGACCCGCCGGCAC 21083 28 100.0 33 ............................ CCCCACCCTGGGCGGGGTCATTCAGGGCGGCGA 21144 28 100.0 33 ............................ GATGCGGGAGTTCTACGGCTTCTCCTGAGTTTC 21205 28 100.0 33 ............................ CTCGGGTGGTGGGACCGCGCAGTGGGGTGTGTA 21266 28 100.0 33 ............................ CCGAACCCGCCCAGTGTTGAACGAGGTCTGCGC 21327 28 100.0 33 ............................ CATGACCACCAGCATGGACCGCGCTATCCCGAA 21388 28 100.0 33 ............................ CCGTCCCCACAGGGGCGTCCCACACCCCAGACA 21449 28 100.0 33 ............................ CGGGTCACACGGTTCGCGCTGATCTGCAGGTTC 21510 28 100.0 33 ............................ GCCTCGAAGGCTTCCGGGTTCTCCTTGTGGGCT 21571 28 100.0 33 ............................ GGTCCACCGAGGAGATCACTTGGTGCGACATGG 21632 28 100.0 33 ............................ GGGTCACCTTCATCTCCGTCTCCGTGATGCTTG 21693 28 100.0 33 ............................ CTCGGGTGGTGGGACCGCGCAGTGGGGTGTGTA 21754 28 100.0 33 ............................ CTTCACCCCGTCACCCGCCTCACGTGCACCTCG 21815 28 100.0 33 ............................ CCGACGCCGAGCTCTTCGCCAGCAGACACGGCC 21876 28 100.0 33 ............................ CGGGGTCTCGTGGACGATCGGGAGGAGCCCCCC 21937 28 100.0 33 ............................ CTGATGGGCTCCTTCACGGCATCCTTCAGCTTG 21998 28 100.0 33 ............................ CGCCGGGAACGTCGAGGCATGGCCCAAGTTCGT 22059 28 100.0 33 ............................ GGAGACCTCCGCGGATCATGAACGTATCCGCGA 22120 28 100.0 33 ............................ GGCGGGCACGGCGCAGGCGGCGGCGGACGGGAA 22181 28 100.0 33 ............................ GTTGCTCGCCCTGTCTGGGAGGAACCCGTCATG 22242 28 100.0 33 ............................ CTTCTTGGGGTCCTTGCCAGCGGCGATGTAGTT 22303 28 100.0 33 ............................ GCACTTCGGGGGGCTGGGCATCTCTGGCCAGGA 22364 28 100.0 33 ............................ CGCGGACGCCAGATCGAGGGCGTACCCCGTGAC 22425 28 100.0 33 ............................ GATCCTTCTCCGCCTGAGCAATCGCCTCCCGAC 22486 28 100.0 33 ............................ GCTCCCCAACACGGCCCTGGTGTTGGCTGTGCA 22547 28 100.0 33 ............................ CCCCGTGTCCACCAGCCACGACGGCTTCCCGAA 22608 28 100.0 33 ............................ AACGATGCGGGGTCGGCGTCTCGGGCGATCAAC 22669 28 96.4 33 ..........................G. TGTGAGGATCGGGGTGCTCCCCCCTGAAAGTAC 22730 28 100.0 33 ............................ CCGCCACCGCACACGAGACTGCTCACGGTCGGC 22791 28 100.0 33 ............................ CGGCAACTCCACCTCCGTGACGATCCACAGGTC 22852 28 100.0 33 ............................ GACACCATCGCCCGGTGGATCAACCCCGCCACC 22913 28 100.0 33 ............................ CCACGAAGGAGAACTGACCATGGCAGCACAGGC 22974 28 100.0 33 ............................ GGAGAACTTCGCGGAGGGCTTCTTCCGGTCCGT 23035 28 100.0 33 ............................ GTTGCCCGGCACACGGGCGGTCTTCACGGTGCC 23096 28 100.0 33 ............................ GGGCGCGGGGCACAAGGCGCGTGCGGCGACTGT 23157 28 100.0 33 ............................ TCGGCTGATGGCCGTCGACAGGTTCGCGAGCGC 23218 28 100.0 33 ............................ GCCCTGCCAGCGCATCGACGTCGCCGACGAGGC 23279 28 100.0 33 ............................ GTGGGAGCCCTCCGCGTCGAACTGGGCGCGGGT 23340 28 100.0 33 ............................ CAACCCGCCGCGAAGTCCCACGAGCGGGCTGAG 23401 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 23462 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 23523 28 100.0 33 ............................ CGTGGACGCCGAGCCCGAAGACCTCGAGGAGTT 23584 28 100.0 33 ............................ GGCGGCCTCGGTGGTCATGACCACGGGCGCGGT 23645 28 100.0 33 ............................ GATCAACGACTTCTGGAAGGGCGACGACATCAA 23706 28 100.0 33 ............................ CGCGTCCTTCAGCAGTCCCAAACCGGCCTTGAA 23767 28 100.0 33 ............................ GGCGGGGATGGACAAGCCTGGTGGGGGTCTGCC 23828 28 100.0 33 ............................ CGGTCACGGGCTTCTTGCGGTACGTCTTGGGTT 23889 28 96.4 33 .G.......................... GCGGTGGACGGGCAGGTGCAGCTGCAGCTGCCG 23950 28 100.0 33 ............................ CCGCAGGGCAACCTGGTCGTTCTCGGCCAGGCT 24011 28 100.0 33 ............................ TGCCCCGGATGCGGCGGGCGGGGTCCCTGGCCC 24072 28 100.0 33 ............................ CTGGTCAGAGAGCGGAGATACGAGGATCACGGT 24133 28 100.0 33 ............................ CGAGCGGAACTCGGCGGCGGCTTCCAGCGGCGA 24194 28 100.0 33 ............................ GTCCGTGGCGCCGTGCAGCGCCCCGCCCTGGAA 24255 28 100.0 34 ............................ CGCCCTACCCACCTCGGGGCGGGACAGCGCTGCG 24317 28 100.0 33 ............................ GACGGTGCTCTCCAACACCTAGGCCGGGATTAA 24378 28 100.0 33 ............................ CCCGCCCCGGTCCACGATGCCCTGCCCCAGGCC 24439 28 100.0 33 ............................ GCTCGGCCCCGGCGTCCTCACCATCGGGGACAG 24500 28 100.0 33 ............................ CGGAGCGCCGGGGGACTCACAGAACTCGAACGC 24561 28 100.0 33 ............................ CCTCCCCTCCCTGCCCCGCGGCAAGAGTTCAAA 24622 28 100.0 33 ............................ CCGTTGCCGGTCACGTTCCGTCAACGGCTCCCC 24683 28 100.0 33 ............................ CGTCTTCTGGTCCATGTCCAGTAGTCCTTCCAG 24744 28 100.0 33 ............................ GAGACCACCGCCGCGCTCGCGGCGATCCGCCCG 24805 28 100.0 34 ............................ CGGCGGGGGCGGTTTCGGCTTGGCCGTCGAGCTG 24867 28 89.3 0 .....................T...A.A | C [24890] ========== ====== ====== ====== ============================ ================================== ================== 105 28 99.8 33 GTGCTCCCCGCGCCTGCGGGGATGAGCC # Left flank : CGACGACGCCATGTCGCTGTGGTCTGGTCGGCGTGAAGGCCGCATGCCGACGGGGCAGAACTTCTCTCGGGAGGACTCATGATCGTCTTGGTCCTCTCAGCCTGCCCGGTAGGGCTCCGTGGGGATCTGACGAAATGGCTGTACGAAGTCTCTGCCGGGGTTTTCGTAGGTAAAGTCAGTGCGCGGATTCGGGAGCACCTGTGGGAGCGAGTGCTGGAGTCATCTGGCTCGGGGCGGGCCATCCTTGTATGGAATGCCAGGGGAGAGCAGGGCTTGACGTTCTCTGTCAAGGACCACCACTGGGACCCAGTGGATCTCGATGGGTTGACCCTGATGAAACGCCCCTCGCGCACCAAGCCCCGATCTTCTCCCGAGCTCAGGCCGGGGTGGAGCAAAGCCGGTGCCCGTCGCAGGTTCGGCGACAAAAAGACCTGACCGCAAAAGTGTCGAAGTCAAAGGAAAAACACCCCTCGGGGGACAATAACCCCTAGTCACCAAGT # Right flank : ACGGCCGGGACAAAACGGCGAGTTCCTCTTCCATTTAGTTGTGGACAACTAAAAATTGCACAACTATAATCAGTCGCGGTCGGGTCGCGTGGCACCCGCCCTGGTCTTGCCAGCCGAGCATCCAGGGTGGCCAGTAACGAGGGGCAGCGAAAAATCTGCACCCGTTTGCGGCATCGATGTCGGCGGGTCTCGGCACTTGGGGGGTCGAGGCCCGTCAGGATCACCAGTGAAAAGGAGTCGTCATGAACGTTCTGCACACCTCCGGTCGTCCTTTCCGGCGCAGTGCGCGGGCGGAAAACCCCGCCGCGCTCTCCCCCGCCCGCCACATCGTCCGCACGGCCCTCGGCGGCTTCCTGGCCTTCGCCGGCGTCAGCCACCTGACCTTCGCCCGTGACGAGTTCCAGGCCCAGGTTCCGAACTTCGTGCCCCTGGACACGGACGTCACCGTCCTCGCGTCCGGTGTGGTGGAGATTGCGCTGGGTGCCTCGCTGATCGCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //