Array 1 162444-163347 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZM01000004.1 Anaerostipes hadrus strain 2789STDY5834860, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================================================================================================================================================ ================== 162444 35 100.0 38 ................................... TCTGCGACTCTGATTTTTCCAATGTCAAAATTGTTTCG 162517 35 100.0 38 ................................... TTTTTAATTCTTGAATGTTTGTTGCTGGATGATGTAAC 162590 35 100.0 37 ................................... TGCGCTTCCTATAGAGTCATAACCTATGTATCTTTCC 162662 35 100.0 36 ................................... CTTTATTTTCGTTTCGGTTTCCCTCAGTTACCATGA 162733 35 100.0 38 ................................... CAAACAACCTAAATACATTTGTGTTTTCATACCATTCC 162806 35 100.0 37 ................................... CTTTTGCCATCTGTTTTCTAATTGTAATCTCACTTTG 162878 35 100.0 39 ................................... CCAAAGTAGAGTTTTTGCGTATGTCGATACCTAACGATT 162952 35 100.0 37 ................................... CGGAGTTAGAAAGTCTAGTTGCTCGTACACATCTCTA 163024 35 100.0 39 ................................... CATAAACTTACAAATTGTGATCACTGCTTCTTGTTCACT 163098 35 97.1 176 ..................................C TAAAAATCATATATTATATACTTACCTACTTTTTATTGTAATTCACTCAAAAGAACTCTAAAAATTTTCATGATTAGTAGAGAAATAATCGTTCATTATTAAAAAAGATGTTAAAATAACTTATAGACACTCTGATAAGGGACGAAAAAAGAACAAATTTATTATAGTGTAGAAAA A [163128] 163310 34 85.7 0 ...-T...G......A......C............ | C,C,A,G [163312,163326,163342,163346] ========== ====== ====== ====== =================================== ================================================================================================================================================================================ ================== 11 35 98.4 52 ATTAAGAAAATAAAAGCCCCGATAGGGGACGAAAA # Left flank : TTGACGAGAGTATCAATACGTATTATGATGAAACTATTCTGGATGCAATCAATCATTTTTTAGAAAGTTATTATCATTTCCTGAATGGATTTGGACCTGTTAATGAAGAACAGGATATTCTGTATTTAGGCGGAGGAACCGGTTTTGCAACGAAAACAATTCTTTATGGAATTTTCTCAAAGAAAGATGCTGTTCGTGTGATTAGTAAAATATTTGATAAAACTATTTCTAGGAAAAAGAACGAAAAACCGCAACATATAAATGATATTCGTCTAGGTGTTTCACCTCATATTAAAAAGTGCACCGAGTATGCAGGACGTGAATATGAATTCGGTAAGTGCAAAGTTTATATAGAAGAAATATGATTTTGCCCCGATGACCTGTTTATGCGGTGTAGAGCCTTATTTTGAATAAGAAAAAGATAAAAATTTATCTCAAAATAAGTTTACACCGCAAAACATCTTTTTAACCCGCATAAATACAAGGATTGCAAGACCAGG # Right flank : ATATAACTTATTCTAGGAAAGGAGTGCCTATGTCATGTTTATATATTACTGAAAATGGGTCTAAAGTCGCTGTAAAAGGTGGGCATTTTAATGTAGAATGTCAAGACGGATCAGAACGCCTTGTTCCGAAAGAAACGCTTGAATCAATTGTGATATTTGGAAATGTTTATTTGACAGTACCATGTATTAAGGAATGTCTGGAGCGAGGAATAGCAGTATCCATGTTTTCAACAAAAGGAAAATATTTTGGACGGATTGAATCAACAAATCATGTGAATGCAAAGAGATTGAAACAGCAAGTATATTTAAGTGATCAAGAGGAAATGCGAGTGCAGTTTTCAAAAAAGATTATTTTAAATAAGATACATAATCAAAGAGTTCTTTTGACAAGATATCAGCGCAGTACGGGGAAGAATATTCAAGAAAATATTCAAGCGATAAAAATACATGAAAATAAAATCTCACATTGTACAAATATTGAACAGATTATGGGCTATGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAGAAAATAAAAGCCCCGATAGGGGACGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 151220-150002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZM01000005.1 Anaerostipes hadrus strain 2789STDY5834860, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 151219 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [151201] 151149 30 100.0 36 .............................. TTATCAAGAGCTTTTTGGTAGCATGGCAACTCTTAC 151083 30 100.0 34 .............................. CAATTGCGTGATCGCTTACCTGCAGATCGCATTC 151019 30 100.0 36 .............................. AAGTAAAGATGAGAGATACTACGTTCTGTTTGTTAC 150953 30 100.0 35 .............................. CTATATGAAACAGATGTTCATGGGCATCCGATCAA 150888 30 100.0 35 .............................. ACAAAAGCTGGAGGTGGTGCTGGTAAATATTCAGT 150823 30 100.0 37 .............................. GCGAAGAAGCAATGATGAGTGTGACTGATACAAAATC 150756 30 100.0 37 .............................. TTTTCTTAAATGGTTTCAAGAAGTGTATCCAGAACGA 150689 30 100.0 35 .............................. CAAGAGTAGAAGTGAAAATAAGAGAGGTGTAAAAA 150624 30 100.0 38 .............................. AACTCCGCTGCCTCTATATCCTTTTGATCGTCTCCCTG 150556 30 100.0 36 .............................. GTTTGGCTCTGTCGGTGTTCAACAGATTGTTGCATA 150490 30 100.0 36 .............................. GGATGGATATTTTATGGATGTCAATATTGTAAATAC 150424 30 100.0 35 .............................. TCAAGTTCTTTGTGTTTCCAAAAATAAATAAATAC 150359 30 100.0 36 .............................. TATAACATCACTCAAAAGAAAGGGTGAACTAAAAAA 150293 30 100.0 35 .............................. GCGTTAGATCTTGATGTGCCAGTGCCGGAAATCTA 150228 30 100.0 35 .............................. GCAGTAGATATGAGAAAGCTGATCGCAAATATTCT 150163 30 100.0 35 .............................. AATCTGGAATCCAAGTTATCGTTACTGTACGCTAA 150098 30 100.0 37 .............................. TCACATGAAACATAATAAAACCAGAGTTTTTACACTC 150031 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 99.6 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCAAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATTGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAATTGAACAACTACTCAACTATTATTATACTTATTTTTAAATTTATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACAGCTATTTTTAGGCTTATTTTCAAAAAAATAAAAATTAGGCACTTTTATGCAAAATGCCTAATTTTTATCATGCGTTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 129093-128328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYZM01000006.1 Anaerostipes hadrus strain 2789STDY5834860, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 129092 32 100.0 34 ................................ ATACAATCAGAGTGGACATTATTACGGAGTAACA 129026 32 100.0 33 ................................ ATTGTTAACAGCGTACCAGACTGCATTAAATCA 128961 32 100.0 36 ................................ CGATGAAGAGATCACAGCTGTATTAGAGCAGTATCC 128893 32 100.0 35 ................................ TTTTTACTTAATGAATGAACTCGGGTGATCTTCGG 128826 32 100.0 35 ................................ TTTCTTCTCAATCAGACGTTTTCCAACGGGACCGC 128759 32 100.0 34 ................................ AGTATACGACTTAGAAGATGTTGAGGAAGTCAGC 128693 32 100.0 34 ................................ TTACACAGAAAGAGAAGGCGATCGTAAAAGAAGC 128627 32 100.0 35 ................................ AAGAAAAGCTTTGTCGAAGTTGCAAGAAAAAATGC 128560 32 100.0 33 ................................ ACTGCAAGAAAAAGGTGGAGAATCTGTTACAAG 128495 32 100.0 36 ................................ TTATACACGTCCTCATATAGTTCCTGTTTGTCTCCG 128427 32 100.0 36 ................................ AATACAGAGATCGGCACCCCTGTCCGCCCTGATCAT 128359 32 71.9 0 ....A........CAA..A..CA....C..T. | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 97.7 35 GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Left flank : ACCCAGCATTTTTGTGGAAATGAGGTGATAAAATCAAATGTTAGTATTAATTACCTATGATGTAAATACAGAAACAGCAGCAGGGAAAAAGAGATTGAGAAAAGTGGCAAAGCAATGTGAAAATTATGGAAGGCGAGTACAAAATTCTGTATTTGAATGCATTGTTGATAATGCACAGTGTGTGATGCTAAAAGCACTCTTAAATGATATCATAGATGAAAATGTGGATAGCTTGCGTTTATATTATTTAGGGAATAAATATCAGACTAAAGTAGAACATTTTGGTGTAGACAGAGGAATACAAGTTGATCAACCATTGATTTTATAGTGATGCGAGGATATAGCAAACATAAAAAGAGTGGGAGATTCGCACTTAAAATATGAAGTAAAAAATAAATTTGTATCTAAAAATAAATAGTATTTGAATGATTTGTAGATATAAGATAAAATTTATTAGTGATATTGAACAAAAAATTAGAAAATTATTGGTTAATATTGCT # Right flank : ATATTTTACTTGGTGTGGGTTATATTAATATTTATAAATTGTCATCAATATTGTAGTAACGATAAGCGGATATACATACAATGGAAGCACAAGAAAGGAAGAAATCAATGAAACGATGTAAAATTACCGCAGTACGGAAAACAGAATATAAAGATCTAATGGAAAAGTATGAAAATCCAATCCAGCATGCCTGCGATATAGAAGAAGGACAAGTATTTATCACAGAAGGATGGAAACGACCAGAAGGATTTTGTGAAAGTGCATGGGAGAGTATTTCACCATTTGTTATGACATTAGCATATGGAGGCAGTGATATTTATGAAGGCTGGATGAAAAACAAAAACTCAGCGATGATCAGTTGCAATGACGGGTTTAGACCGGTAAGTTTTTACATTGAAGTGTTAGACGATAAAATATATTGATGAGGAAATATGACAGCACTGGTTTATTCGGAACATCCATATTACGACAGGAAAGAGATCAGCATTGAAGATTTAAAA # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //