Array 1 60627-60000 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTDM01000005.1 Tissierella creatinophila DSM 6911 TICR_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 60626 29 100.0 38 ............................. GTACTTTGGTATCATAAAAGGTTACAACTTCTTTTATA 60559 29 100.0 37 ............................. GCTAAGCCAAGAGCAAGAAAAATTATTCAACTTATTT 60493 29 100.0 38 ............................. GACATGGGAACATGGTACTAAAAAAAGGTAGCTAAACA 60426 29 100.0 37 ............................. GCTGCTCCATCAAGCAAAGTTTTGTAATCGTCAAATA 60360 29 100.0 37 ............................. TTTCTCTACTATTCCAAATAGTGTGAGCTTCATCAAA 60294 29 96.6 37 ...........G................. TGGCAAAACAGTGTTGCCAGATACCATTAGCTTAATT 60228 29 96.6 38 ...........G................. TATAGGAGTTCCTTAAAATAGATCTTCCTTCTGGATTT 60161 29 96.6 37 ...........G................. TTGCCCTGTCATGATTACATGCACTCCCATATTTTCT 60095 29 96.6 37 ...........G................. TTCTTTTGAACTATTGCATTTTTATCAACAGTTGAAT 60029 29 89.7 0 ...........C...A............T | C [60003] ========== ====== ====== ====== ============================= ====================================== ================== 10 29 97.6 37 CTTTTAATAGAACCATAGTGGAATGTAAA # Left flank : GAGACCCTTGAAGGAGAAGAAACGGTAGATATAAAATATATAAAGAGAAATGATTTAATAAGTCTGTTATATAAACCTTTAGAAAAGATAAAAACTATTACATCTGAAGAATTAGATATAATATTAAATAAATATAAACAATATAAAGTAATCCTTGAAACTATAAAAGAATTCAAAGAAATACTATTTGGAAAAGACAATACAAAATTAAAAATATGGATAGAAAAATCTAAAGCCCTCAATATTAGAGAGCTAAACAGTTTTATTACAGGGATTAAGAGGGATATAGAAGCAGTAAATAATGCTATTACTTATGAATATAGCAATGGTCTAGCTGAAGGGAAAATAAACAAGATAAAAGTAATAAAAAGAATAATGTATGGCAGATGTAGTTTTGATACATTAAGAAATAAAATATTAAAACTAGAGAATAGTACTTAAATCAACTAACATTGGAAAGAACCAAATTTCAATTGACAAATACACCTAATAAGTTATTT # Right flank : TTTATTTCTCTCTCATAATGGTTAAATATATAGCTAAAATAAGGATTGATACATGATTTATTTTATAAAAGTTCATCATTATATTCATATCCATTCACCATCCTTTATCCTCTCCCTAGTGATAGTATAGAAATATTCAAGTTATAGTTTACTAACTAAATTTTAAATATTATTGTTAGTGCAAATTAATTTTAAACTGATATAATAGTAGTAACTAAATTAAATAGGAGGGATACATTTATGAACACAATGATTAAAAAGTTTGTAGATACGGGTATGATGACAGAAGAGCAGGGTAAATTTATCGAAGAAGCTATAATGAGAAAAGATTCCATAGTAGTATCAGGCCATAGATCAGCTGGAATAAGACCTTTAATGGCATCTTTAATGGGTGTAGCAAAATCTAACTTTACCAATGTACAAGTTAAAGGTTTTGAAGATCTTGAAAAAGATGTTGAATTCTTCCTTATTCCAGGGCTTGACGACATAGATTTTGAAAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATAGAACCATAGTGGAATGTAAA # Alternate repeat : CTTTTAATAGAGCCATAGTGGAATGTAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 62544-66930 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTDM01000005.1 Tissierella creatinophila DSM 6911 TICR_contig000005, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 62544 30 100.0 36 .............................. CAATAGCATTAGTAAATTTAGAGGAGGAAATGAATT 62610 30 100.0 36 .............................. AGTAACTACTTTATAAAAAACTATACTATTGATCTT 62676 30 100.0 36 .............................. TTATATATAAGAACTATAATTAAATTTTATAATATT 62742 30 100.0 36 .............................. AAATAGTTACACGGTAGAGGACTACAAACGTGTAGC 62808 30 100.0 37 .............................. TAGTAACTACTTTATAAAAAACTATACTATTGATCTT 62875 30 100.0 36 .............................. ATATAGGTTTTGAAATAGACAAAGGCTACTATGAGC 62941 30 100.0 36 .............................. TAGCGGATGTAATAGCGAAGATGAATACCCAGAACT 63007 30 100.0 36 .............................. CTGTATTAGTTAATTTAGATAATGCTTTAATATCAT 63073 30 100.0 36 .............................. CTGTTCTAGACACTTTTCTAAAAATTCCTTTTCAGA 63139 30 100.0 36 .............................. TGCTTGTAATGGCATGGGATTAGAAAATATATTCCG 63205 30 100.0 37 .............................. AATTTAATTTAAGTAGTTCTTGAGTAGTTTTTAAGTT 63272 30 100.0 36 .............................. TAACACGTTATAAGTTGTTAATTTATCAATTACCAA 63338 30 100.0 36 .............................. ACTATGAGAAGTTTGTTGAGAAGTTAGCTAGAAAGA 63404 30 100.0 36 .............................. TTTAAAATCTATAGATAAAGAAAAGTTAGTGTTTGA 63470 30 100.0 36 .............................. CGTTACAAACCTTGCTGACCCAATTTCTCCCCCTAC 63536 30 100.0 36 .............................. CAGATAAATCAACTACAGTAAAATATGCTTTATCTG 63602 30 100.0 36 .............................. CTCATCTGTGCTACCTCCTACTTCTTATACTTTTGC 63668 30 100.0 36 .............................. AGCGAAACCAACTTGCATTTCCTCTAAATCTTGTTT 63734 30 100.0 37 .............................. CTAAAGGGATTGCAAAGAACTTAGAACTATCAATTAC 63801 30 100.0 36 .............................. CTTGCCACATCTTTTACATTCCCATTCAACTCTATA 63867 30 100.0 36 .............................. TAAAATTTACAAGTGATTTTGGGATTATAGAAAGAT 63933 30 100.0 37 .............................. GATAAAGAAAAAGGTTTTAAGAAATGAATTGTAAAAT 64000 30 100.0 36 .............................. TAAAATTCACGCAGATTATACTTTATATGTTGATGC 64066 30 100.0 36 .............................. GCTATAATAATATAGAAGAGTATCACAATGAAGAGG 64132 30 100.0 35 .............................. TTAGATGAAACAATAGAATAGGGCAAAAAGAATTT 64197 30 100.0 37 .............................. CCAGCAACTACTGTTTTTATTTATTAATTCTATAAAG 64264 30 100.0 37 .............................. AAGATGACGATTACCATGTTACAGCTATCCAAGGTGA 64331 30 100.0 35 .............................. TTTATAAATTTTGATTTGTTTTTCTCTATTTCTCC 64396 30 100.0 36 .............................. GTCAACTAGTTCTATATCTTCATCAGAAACAGTTAC 64462 30 100.0 36 .............................. AACAGTATGTAGCCGAAGAAGTGTATTTCCAAATCG 64528 30 100.0 36 .............................. GCAGCGGTCTTAAAATCTAATCCGTTTGCTATTAAA 64594 30 100.0 36 .............................. AGTATTAAGTAAAATACAAATTAAATACTTGTCTAC 64660 30 100.0 36 .............................. AGAAGAATGTTCGATTTTAAGAGTTAAAAGATGTAA 64726 30 100.0 37 .............................. CGAGATAGCCACGTGATGCCAACGAGATAAAATAGAT 64793 30 100.0 36 .............................. TCTAAAACATCACAATTAAATATAACACTTTTACCA 64859 30 100.0 35 .............................. TTTGGCATATTAGGGAATAAAACATTCCGACCTTT 64924 30 100.0 36 .............................. TACAGCTATTAATTCTCCACTACTATTAAATTTGAC 64990 30 100.0 36 .............................. TTCAGTTTCAAAAGCATTTTTAGTAGCCCCTTCAAA 65056 30 100.0 36 .............................. AAAAACATAATATCAAAATGAGCGAAGAAGAACTAC 65122 30 100.0 37 .............................. ATAAAGATAGAAATGGGCAAGTATCCTTTACAGAAAG 65189 30 100.0 36 .............................. CCCGTTCCACTCATTCAATAAAGTATCATACACCAA 65255 30 100.0 36 .............................. TAAAATTAGATTATTATACATTATATATATATATAT 65321 30 100.0 35 .............................. TATACCTATATTCTCCTCGATAATCATAATCTGAA 65386 30 100.0 36 .............................. CTGGTGTAAATGGACCATATCGGCTTGCTATGACTA 65452 30 100.0 36 .............................. AGTGCAAAAAAAGTAGCAAGTTGGCGAAGGATTGCA 65518 30 100.0 36 .............................. TACTCTGATAGGAATTACTAGAATCCAATCAGGAAA 65584 30 100.0 36 .............................. TTACAGCAACTTTACAAGCTAGATAATATAGATACC 65650 30 100.0 36 .............................. ACTCATTTATTATATAAGCTCCAACTTCTATAAGTT 65716 30 100.0 36 .............................. TCCATGCTTTACAGTACAGAAGTTAAACGAGACAAC 65782 30 100.0 36 .............................. ACAAATAGTATATTTAATTAATTCTATTACTGATGA 65848 30 100.0 36 .............................. GGGTTTCCCTCGGGCGGCTACCATAAAGAAGGAAAC 65914 30 100.0 36 .............................. TAATTCTTACAATACTTATATAAAGAATTGGTTAAG 65980 30 100.0 36 .............................. TATGCAAAAAAAAGCAAAATAAAAAAGTGGAAAAGG 66046 30 100.0 37 .............................. TCCAAGTTAAAAATATACCTACAATTCCTAGAGCGAT 66113 30 100.0 35 .............................. GAACGAACAGGAGCTATAGAATCAGAATAAATATT 66178 30 100.0 36 .............................. TTTTTGATTAGTATTTTTCTTTTCTCTTACTTGACT 66244 30 100.0 35 .............................. GAAAAGGGTAAAGAATTTCATATTAGTAGTCCTAT 66309 30 100.0 36 .............................. TTAGAGTTTTTTTACTGGAAGATTATAGATTTTTAT 66375 30 100.0 36 .............................. TAGCAAAACCGACTTGCATTTCTTCTAAATCTTCTA 66441 30 100.0 36 .............................. CCAGATAAAGCTATAATTGCTCTAGTGGATACATAC 66507 30 100.0 35 .............................. GTAATAGACGACCTAGGAAAAGAGAATTGCAGCGA 66572 30 100.0 36 .............................. TGCTTTGTCATTACTTCAATACCCTCTTTGATGTAT 66638 30 100.0 36 .............................. TTCTAGTTCTTTTACCTTTGTTTGAATGTCTTCCTC 66704 30 100.0 36 .............................. CCGTAACCCCTGTCTCTATAAAGCTTATTTTCTTGT 66770 30 100.0 35 .............................. TTTTTTGCTCGACTCCCCTTGCTTTGCTGAGGTCG 66835 30 100.0 36 .............................. AGTTTGAATCTCTATATTACATACAATAGTAAGAGA 66901 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 67 30 100.0 36 ATTTACATTCCACTATGGCTCTATTAAAAG # Left flank : CTTTTCCCTACAGTTGCAATATTTTCTCGTAGTAATTTAGATGCTGAGATTGAACTCATATTCTTTGACAAGTTTATTATTTCATCTTCTAGTCTTTTAGTTTTTTTAGCTTTATCTTCTATGAACTCAAACTTTTCAGAAAAAGTTCTTCTACCACAATCTTCATTATTACAAAAAAACTTTCTGTTATTTAATATTACAACTGTCTTTTTTACTGATATAGGAAGGTCTTGAAAGCTTCTTTTGTAACGAGAATGTATCCTTTTTGAAAGAGCATTGCAATTAGGGCAACAAGCTTCTTGCTTACTTGATTTCACATTTATGTAGATGGTATCTTTTATTACTTCATGATTTATATATTCTAAGCTTTTATCTAATAATTTAATTAATTCATCCAATATCAATTCCTCCAAAGTTTTAATATGGACATATTATATTAGAAAATTACCATAGAGTCAACTAACATTGGAAAGAACCACTTTTAGAATATCATAAACAGT # Right flank : GTCGTTTACTTAAATCCATTTAATTTACTGATTTCTATTGGTTGTTTTTGTCTATCACTATTTCTAAAACATATATTACATTAAAATTTATTAAAACTTTACAATTTATCTTCTTAAATCTTTATATTATCAAACTTGTCAATGTCCCAGCTTTTTTACAGTATTACTGGTCGACAAAACGCTACTAAAAAAAGTTAGAAGTTTTATCATCTACTAATCCTAGATATTCTTTGTCAAGCCATCTTTCATTTCTACTTTTAAACACTAAAAGTGAATCTTTATCTTTTCTGATATATTTATCTAATTCCATTTTTAATTTCATATATTCAGATTCTCTAAGTTCACCTTCAAATGTAGATTTCTGTATGTTTGTTAAATATTTCTTACAAGTTTTAAAAACATTTCTAGAAACCCACGAACCACCCTCATCTGATATTATATCATATACCAATATTAAATACATTATATCACCACCATATTTCAAACCCACAATATTCTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTATGGCTCTATTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //