Array 1 19202-19708 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VSES01000005.1 Aggregatibacter actinomycetemcomitans strain PN_738 5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=================================	======================================	==================
     19202	    33	 100.0	    34	.................................	TTATTAACAGTATGTGTGAACTCATTGATTTTCA    	
     19269	    33	 100.0	    35	.................................	TTTTGCCGACTTGAATGTTTTGGTCGGTATAGAGC   	
     19337	    33	  97.0	    34	................................T	TTGATGAAAAATTTTATTTTTGTGATTCAGTTTC    	
     19404	    33	  97.0	    34	................................T	TTCGCCTTTTAACGCGGATGTAAGATTATTCGCC    	
     19471	    33	  97.0	    38	................................C	AACTGAAAGCCGAATTGCAGATTGCGGAAAATTTTAAT	
     19542	    33	 100.0	    35	.................................	ATCAATTGAATGTGGCTTTTGTGCAAAGTTGTTGG   	
     19610	    33	 100.0	    33	.................................	CTACCGGTACCTGGAATTGGTTAGCCAATACCC     	
     19676	    33	  81.8	     0	.......T....G.....A.C...T......T.	|                                     	
==========	======	======	======	=================================	======================================	==================
         8	    33	  96.6	    35	GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA	                                      	       

# Left flank :   TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGAAGACCCGGAGGGAAAAACCAGGTTGCGCCGTATTGCGAAGCATTGTCTGGATTATGGCGTACGGGCGCAATATTCGGTGTTTGAATGCGATGTAACGCCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCACCTAGGCAGCAAATGGAGACGCAAAGTGGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGA
# Right flank :  AGGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAATATATAGACTGAACCCCGTTATTAGTCGGGGTGCTTTGTGCTGAGATGATACCCGTGAACCTGATACAGTTAATACTGACGTAGGAAACTAACAGAGAATCACATTCCCTTTCTTTTTTCTCTTCTTTTATCGTCATTATTGCTGATTATCTTTTTTTCGTTAAAAAAAGGAAAAATTATGCAATATGGTTTTTGTTGTCCGTTATTTGTAAATAACGGAGGGCGTGATGAGTAAGGTTGCGCAAGCGTTGACCATCTTCGGTTCGGACAGCGGCGGCGGTGCCTGGGTTCAGGCGGATTTGAAGATGTTCCAAATGCACAGGATGTCGTTTGGTTCATCGGTGGCCGCGCAAAATACCTTGAACGTGGTTGATATTTACGCCGT

# Questionable array : NO	 Score: 6.07
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.40,-3.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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