Array 1 60510-67585 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOJ01000013.1 Eggerthella lenta strain MRI-F 36 MRIF36_contig_013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 60510 33 100.0 34 ................................. TGCTGTGACCAATCTGCTGCGGCGAACTGGTACG 60577 33 100.0 33 ................................. TGAACGAAACGTGCAGGAACCACCGTAACCATG 60643 33 100.0 33 ................................. TTGAAGTCCTCAAACGTCATCTTGTACAGCTGC 60709 33 100.0 34 ................................. GTGTACAATTGTCAAGTGGTAAATGATGCTTTAT 60776 33 100.0 35 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCGAT 60844 33 100.0 33 ................................. TCATCACCTATCGCAACCTTTCTGATGTACCCT 60910 33 100.0 35 ................................. CTAAAATCCCAGATAGTCGAACACGTTGTTGAAGA 60978 33 100.0 33 ................................. CTCGATGCTGCCAGAAACAGGCGCTTCTGGCGT 61044 33 100.0 34 ................................. AATCTCTGGTACACGGTGTTGTAGCGATTCCTGT 61111 33 100.0 35 ................................. CCGTGAAGCTGCAAGCCCCTCTTGAAACTGTCGAA 61179 33 100.0 34 ................................. ATGATCATGCCCTACTACAACCAAATGTATTTGT 61246 33 100.0 35 ................................. CTGCCGATACTGTTCGATCTGCGCATTGTAATTAC 61314 33 100.0 36 ................................. ATCAACAAGCAGATCGCGCTGAAAGACCTGTTCGTC 61383 33 100.0 34 ................................. ATCACGCGCGCAGAGTACAAGACGGCCAACACGG 61450 33 100.0 34 ................................. CTACGAAAGGCTGAACAGGTACTACAAGAACTAT 61517 33 100.0 35 ................................. ATTTATTACCGCTCACCAGAGACATAATAGCGATA 61585 33 100.0 36 ................................. CCCTGATGGAGCACAATGGTCAGCGGCTCATACGTC 61654 33 100.0 33 ................................. AAGTATTCTTGCTGATCTACGATATTCGCGCCG 61720 33 100.0 34 ................................. CTGCATGACGAGGATATCGCGCTCGACCCGATCC 61787 33 100.0 33 ................................. GATCATCAACTGGATCGATGCGAACCTGCAGTG 61853 33 100.0 34 ................................. ATGACGATATGGTAAGGAGGAGCGCATGAACCAG 61920 33 100.0 34 ................................. ATTCCCTTTGGGAACGGCCAGTGGAGTTCGCCGG 61987 33 100.0 33 ................................. ACGTCCAGGTTGCCCGCGTATCCGGGCACCTGC 62053 33 100.0 34 ................................. TCGAACATGACGTGCGGGATGCCGATCAACCGGA 62120 33 100.0 34 ................................. CTGCAGCGCGGACATTGGGCGGTTGCGAATAGCG 62187 33 100.0 35 ................................. ACCGTCTCGCTCGTTGCCTTGGTAGCCGTGTTCTC 62255 33 100.0 33 ................................. CAGCATATGGAATTTGACATTTTGACGTTCGGG 62321 33 100.0 32 ................................. CCGGGTAATCCGATCTGATATCGCGGCGCTTG 62386 33 100.0 35 ................................. ACTGTTCCGGGCTGTACGCGTAGGCGATCCACGAG 62454 33 100.0 36 ................................. GGGCTCCGCCTGGAGAATATAGAAGAGTACTGGAAA 62523 33 100.0 34 ................................. AACCAAGGGGGCGTCGATCAGAACTGCATGCGCT 62590 33 100.0 36 ................................. TGAAAGCCGCGAGCAACTTGCGCGAGCAGGCGCAGC 62659 33 100.0 35 ................................. ACGTCCTCCGCCCGGGAATAGCGCGTGAGCTTCGC 62727 33 100.0 34 ................................. GAGGATGCGCGCTATCCCATCGACGGTTGCGGCG 62794 33 100.0 33 ................................. AACACGCAGTTAGAGTAAGTCATGCAGTCGCAC 62860 33 100.0 33 ................................. CTGCCGATACTGTTCGATCTTCGCCGAGACTTC 62926 33 100.0 33 ................................. AAGCCCGCGATATCGTCCTTGTTCTGCGTCACC 62992 33 100.0 34 ................................. ACGCAGCTCGGTATGCTGAATTCGTCTAGCGCCG 63059 33 100.0 34 ................................. TGAAAGCCGCGAGCAACTTGCGCGAGCAGGCGCA 63126 33 100.0 35 ................................. CGCATCAAGGTCGATGCGGGCGCGTCCAAGAAGGA 63194 33 100.0 34 ................................. ACGTCTTTTCTAAAGTCGATGCAAGAGTATTTTT 63261 33 100.0 33 ................................. ATAATCTCGGTTTCGACATGCACGCGGTCGCGG 63327 33 100.0 34 ................................. ATCAGCACCAACGCGTGCTGCTCTGGGTTGCGCT 63394 33 100.0 34 ................................. CCATGCCCATTGCCCACCACAGAACCGGGTCATT 63461 33 100.0 33 ................................. CGGTTTGATCTCCGGCATCTCGAATCCCTCCAT 63527 33 100.0 33 ................................. TGTCCCGGGACAGCGAGTACAGCGAGAAGATGG 63593 33 100.0 34 ................................. AAGTACTCCTGCTGATCGACGATATTCGCGCCGA 63660 33 100.0 33 ................................. CTTATTGGCGATCTCAACACCAACCGGCACGAA 63726 33 100.0 33 ................................. CTCCATACCGTCACGCCCCCGAATAATAGCATC 63792 33 100.0 33 ................................. TCGAAATACCCTTGCTCGAATTCCGGCAATTCG 63858 33 100.0 33 ................................. TGATACCACATGCCCCCGTATTGCATGGCGTGC 63924 33 100.0 35 ................................. CGAAACGATCGACGTAAGTACGGCTGTTGAGCGTG 63992 33 100.0 35 ................................. TCGTCGAGGGCCATGTCGCGTTTCGCCTCGTTGGT 64060 33 100.0 35 ................................. TACAAAGCGAAGGACGCTATAAAGCATATCCGCCA 64128 33 100.0 34 ................................. CGTCAACTACGAGGAAAAGATCCCGTGGGACATG 64195 33 100.0 34 ................................. CATTCGGAAGATAAACCGCCGCGCGAGCAACACA 64262 33 100.0 36 ................................. GCGCGTATGCGGAGCTTTTCAACGTCACCGAAGCGG 64331 33 100.0 32 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAG 64396 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 64465 33 100.0 36 ................................. TCGCTCGCAGCAGTGATGCTATGCGTGCCCGAACTC 64534 33 100.0 32 ................................. CCAAGCAACAGGTCTCCCAAGCCGAGATCGAC 64599 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 64668 33 100.0 34 ................................. CCGTTTTGTCTGCCCTGGGACTTGGTGGAGCTTG 64735 33 100.0 33 ................................. CGAGGAGTTTCGCCCCTATCGCGATCCGTCCGC 64801 33 100.0 35 ................................. TTCCTGCACGCAGAGGGCGGGCCGCGCACGTGGTG 64869 33 100.0 33 ................................. TGCACACCCTTGCCGAAGATGCTCAGCATCGGG 64935 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 65003 33 100.0 34 ................................. TCGGCAAATCTGGGACGCTGGAAGCCGCTGAGGC 65070 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 65137 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 65204 33 100.0 34 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATT 65271 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 65336 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 65403 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 65471 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 65537 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 65603 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 65671 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 65738 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 65805 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 65872 33 100.0 35 ................................. GACTTGGCGTCGGCCGCGGCGCCGGACAGCGCCTC 65940 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 66006 33 100.0 35 ................................. CGCTCGCAGCATAACGAAACGTTGGCTACAGCCGC 66074 33 100.0 35 ................................. ACGCACTCGTAGACGTCGGCCGGGGTGTAGCAGTC 66142 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 66211 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 66278 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 66344 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 66410 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 66478 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 66545 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [66603] 66603 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 66670 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 66736 33 100.0 35 ................................. ATGATGACCACCGACTCGTCCGCGGTTCCGTAGAA 66804 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 66872 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 66940 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 67007 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 67074 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 67144 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 67213 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 67279 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 67345 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 67416 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 67485 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 67551 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [67555,67567] ========== ====== ====== ====== ================================= ====================================== ================== 106 33 99.5 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TTGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGC # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //