Array 1 174384-172631 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASQK010000008.1 Sphingomonas oligoaromativorans strain DSM 102246 Ga0373361_08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 174383 36 97.2 30 .........................C.......... CGGGGCGGATCATCACGCCAGCGCCGCAGG 174317 36 100.0 30 .................................... CGCCGTGGCCATGGAGCAATGCACTTGCGC 174251 36 100.0 30 .................................... TCGGGGCGTGGCCTCGGCGACCGGCGATCT 174185 36 100.0 30 .................................... AGCAATACTCCTTGTGACCTGCAGCCATAA 174119 36 100.0 30 .................................... ACGCCAGCTTTCCGCCCGTGTCGCGCAGCT 174053 36 100.0 30 .................................... CGACGATGCGGCGTGGGAGCGTGTTCGTGT 173987 36 100.0 30 .................................... CCTTGCCGCCGTCGCCCTGACCATCATCGG 173921 36 100.0 30 .................................... CCGGCGTTGCATGGCGTTCGCGCGTCGCGA 173855 36 100.0 30 .................................... TGTTGCGGTAGTCGGCGAACGCTTCCGTAA 173789 36 100.0 30 .................................... TGGATTCCGTTGTTACGGGCGTTGTCGATA 173723 36 100.0 30 .................................... GACGACGTAGCTGCCCATGTGGACGGGCAG 173657 36 100.0 30 .................................... GCACTCGCACGCGGCCATCACAAGGTCTAT 173591 36 100.0 30 .................................... GAACAGGACGAACGGCATCGTCGTGGGGAT 173525 36 100.0 30 .................................... TGAGCGTCAGCAGGAAGAGATCCTTGTAGA 173459 36 100.0 30 .................................... TGCTACAAAGATCGCCCGCGTTCCACCTGA 173393 36 100.0 30 .................................... CACCCAAAATTTGCAGGCCCGCACATTCTA 173327 36 100.0 30 .................................... CACCCACGGCGTTGGTGACCGATGCGATGG 173261 36 100.0 30 .................................... CGCTTGGAGCACCGGCCCCTGCGCCGCCGC 173195 36 100.0 30 .................................... ACCACGATGGTCGGGCTGTCGAAGCACGCA 173129 36 97.2 30 ............T....................... ATTGCCCGGAGCGCAGAGAACCGACCGGGC 173063 36 100.0 30 .................................... AGGGCGGCAACGATGGCGGCGGCGAAAACA 172997 36 100.0 30 .................................... CGCGCCCAAGGTGACGGCCGCCAATGATGT 172931 36 100.0 30 .................................... GACGCCTATTATTACGCCTATGCCGGCAAT 172865 36 100.0 31 .................................... CATGCCTTCGTGATGCAGTAAATGCCAACCA 172798 36 100.0 30 .................................... TTCGAGGCACGGCATGACATCGTATTGCCA 172732 36 100.0 30 .................................... CATCGTGGTCAAGCGCACTGCGGCGGCTTC 172666 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.8 30 GTTGCCGCTGGACCGCGATCTCTGAGCGGCTATCCT # Left flank : ACGGCGTCATCCGAGCTTCCCGGTTGTCGATGCGGAGGGGCATGTGCTCGGCATCGTCGATCCGCCTTCGGTGATGGGCTGGCGTCGGGCGGGCAAGCATCGTGACACGAGCCTGGGCGCGTTGCTTGCCGGAATGCATATCATCGTCGCCGATCCGAACGAATATCTTGAGAGCCTCGCGGAAAAGCTGGTGAAGGCGAATGCCGCGCATCTGCCGGTGGTGGAGCCCGACAGGGGCACGCTGGTCGGCTATGTCGGCTGGAAAGACCTGATGCGCGCGCGGCAGAAGGTTCGTGGGGAGGATCGCGATCGTACCGCCTTCCTCGGGGCCGCGATCAATCGATATCGGAAGACGACCAAGGAATAGATCGGCGGCAATCCGGGCATTCGTCGGGGAGGGGTACGTTCTGCGCCTCGGCCATCATTCTTGTCTGTATCTGAATTGGGCTTCCGAGTTCCGTCTGCTCACGCTCGGTGGGGCTTGGAGCGAGCATCATCGC # Right flank : GGATCGTCAGCTATCTCTCTGTTTTCACAGGAAATAGATGACGATCCATTTTCGCGAATCACTGGTGGGTTCCCTTAAAACAGGGCCAGTTGATCTGGATTCCTGCGTGGCTTGCGCTTCCGCTGGCCGGCATAGCGAATGATATTCTCATATTGCCTGTCCGTGAAGCTCAGGATGTGAATTTCTCCCTTTTCGGGAAGATGTGCCTCGATTCGTCGCATATAGGCTTCGAATTGCTCCTTTCCGTTGCAGAATCGAGCATAGATCGAGAACTGGCTTTTCTCGAAACCCTCATCGAGCAGATATTCGCGGAACTTCGTAGCGGCGCGTGCCTCGGCCTTGGTGGCGACGGGCAAGTCGAACATGACGAAGATCCACATCAGCCGATAGCCGCTAAGCTGGGTCGCACTCACCGCAGCAGCGCGTCGAGCCCGGCCAGCTCGAGCGCCGATGGGGGCTGGGGGAGAACGAGATCGGCGGCCTTGCCCGTCTGGAAGCTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCGATCTCTGAGCGGCTATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.80,-6.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //