Array 1 1822620-1818436 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFNV010000003.1 Macrococcus caseolyticus strain NCTC7486, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1822619 36 100.0 30 .................................... AAGAACACCTATGTCTCAGCCACCAGCGAT 1822553 36 100.0 30 .................................... TAAAGAGCATGGTCGTACCTGTCCACATTG 1822487 36 100.0 30 .................................... ATACTCATCAGAAACCTTATTAGTCCTTTT 1822421 36 100.0 30 .................................... TCTATTTAGTAAACTCATAAGTTCACTCCT 1822355 36 100.0 30 .................................... AATAAAATATTCGGTTCATTTAGAGATACA 1822289 36 100.0 30 .................................... TCACGAAATGAGCTGCTATATGAAGTTGGA 1822223 36 100.0 30 .................................... AGTAAAAGAACATAAAGTGATGAGGAGAGA 1822157 36 100.0 30 .................................... AGGCAATCAGTGGGGGAACGCTAACTTAAT 1822091 36 100.0 30 .................................... AAAGGGAGATACCTATGTCGCATTAGACGT 1822025 36 100.0 30 .................................... AACAGAAATGTATCGTATGACTACAACTGA 1821959 36 100.0 30 .................................... AGCAGCAGGAGCAATAGCACCGAGCAACGC 1821893 36 100.0 30 .................................... TGCTGCGTTAGGACTATATGGTGTTGTCAT 1821827 36 100.0 30 .................................... ACCGTCAATCTTTGGAATGTTCTTTGTTAT 1821761 36 100.0 30 .................................... TTATCTTTTGGTGATGTATCCCCACTGAAT 1821695 36 100.0 29 .................................... TTTTAGACATTACAAGATACGCCGGCTCT 1821630 36 100.0 29 .................................... TGTTTAGAATGAATATTGACCCTTACACA 1821565 36 100.0 29 .................................... GTCCTTATAAAGTCGCTCGCACTCTTGAA 1821500 36 100.0 30 .................................... AAGATTTTAAGGGTTAAGATTGATAGAGAC 1821434 36 100.0 30 .................................... AAATAAAACATATATTTCAGCAGGATATTG 1821368 36 100.0 30 .................................... TCAGTATTTTCGTTTAAATGTACGGAATTA 1821302 36 100.0 30 .................................... ATGCTGTAAATAATTCAGTTCAACACGATC 1821236 36 100.0 30 .................................... AAATCTTATCATGGATTATGCGGTGAAGAA 1821170 36 100.0 30 .................................... TCTGTCTTATACGATATGTCAAAGCTGTTC 1821104 36 100.0 29 .................................... ATTGGCGATGGCCGGTGCACATGCTATTA 1821039 36 100.0 29 .................................... GCAATAAAATAGGACTTCGCTAATTCAAC 1820974 36 100.0 30 .................................... ATCATCTGATGGCGTAGAACAAGGACATGT 1820908 36 100.0 31 .................................... GTGGTTATGCGAATGGCGGTATCATTCCTAA 1820841 36 100.0 30 .................................... TCGGTAGATTATCTCACGCAAGCATTCACT 1820775 36 100.0 30 .................................... TCACCAAACGTCCATTGTCTACTGTAATCA 1820709 36 100.0 30 .................................... AGACGGATTCGTTCGTGAAGGGTTCATGGA 1820643 36 100.0 30 .................................... AGGCAATCAGTGGGGGAATGCTAACTTAAT 1820577 36 100.0 30 .................................... TAAAGAATTAGAGTTTGCACCTGAATGGGA 1820511 36 100.0 30 .................................... TACTTCGTTTAGATAACCTTCAAAGTTAGA 1820445 36 100.0 30 .................................... AGCCGAAATATCAGAAGACATTAAAAAAAT 1820379 36 100.0 30 .................................... CTGCTGAGTAGTAGGTTCTTTTATTATAGG 1820313 36 100.0 30 .................................... CTTGAGCAATTGGAATTAGCTGAAATGTTA 1820247 36 100.0 30 .................................... TTTCACGTTGCCCATTCCGACTTCACGAGT 1820181 36 100.0 30 .................................... ACGATTTAGAAAATAGACTAAAAATATTGG 1820115 36 100.0 30 .................................... AAAATAACAGAAGAATTAGTTTATAAAAAG 1820049 36 100.0 30 .................................... TAGGTTTCAACCCACGGCCTTATCATGCAT 1819983 36 100.0 30 .................................... TCTAACTGATTCTAACAGTTGAGTAAGTGC 1819917 36 100.0 30 .................................... GGTTAAGACGAACTGTTCTATTGCAACGCT 1819851 36 100.0 29 .................................... ACAAGATAGCAGTGCAGCGTGGCGTAATT 1819786 36 100.0 30 .................................... TTTCGTTGAGCGTATTCAGTATTATGCGAA 1819720 36 100.0 30 .................................... CGTTACATAATCAGTCTCATCATTGTAATA 1819654 36 100.0 29 .................................... TGTTGTCGTGATAATCCACCATCTGTTAT 1819589 36 100.0 30 .................................... TCTGAAAATACTATCTATGCGTATGACTAA 1819523 36 100.0 29 .................................... GAAAATAATTTAGTTGATGTAAAAGCATT 1819458 36 100.0 30 .................................... ATTAAGGGTTACGAATAACTTGCTTTATAA 1819392 36 100.0 30 .................................... TGAAGATGGTACCTTTATTAGACCAAAAGA 1819326 36 100.0 29 .................................... GCAGACATCTACGCACAATCACAGAAGTA 1819261 36 100.0 29 .................................... GTTATTTCAACGCTTAAACGAGAGATTAG 1819196 36 97.2 30 ................T................... GTGATTTACAATACACCAACAGATAACGCT 1819130 36 100.0 30 .................................... CAACACGAGTCCAATAGAACTATTATTGTG 1819064 36 100.0 29 .................................... AGAAGATATCGCAATCGGTAACTTAATCA 1818999 36 100.0 30 .................................... ACCTGAAAACGTAGGTGTAGCGAACGTTGG 1818933 36 100.0 31 .................................... TATGGGGTGCTTGTGTGGTCTATAGGTCTAA 1818866 36 100.0 30 .................................... AGTCTAAAGAAATAGATATTATAATGCTTC 1818800 36 100.0 30 .................................... AGCTAACTCTTCTGACTCTACCACTGTTAT 1818734 36 100.0 30 .................................... GATATGCTTCTGCCGTTCCTTTATTTACTA 1818668 36 100.0 29 .................................... AAAATGGAAGTGATTAAATGACAGAGACA 1818603 36 100.0 30 .................................... ATCGTGATAACAAGATGATGTTCGACTACT 1818537 36 97.2 30 ................T................... GTACGATGTGAAAGACCCGTCATTCAAGAA 1818471 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 64 36 99.9 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGACGAGGAAAGCATGTATTGATTTGATGAAGGAGGAGAAAAAAGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTATAAGGGACGTTAAATCCTTTATGGATTTAATTAAGAATTATGGAATGACAACGATTATGGTTACAAATCATCCTTATTTTATGGTAGAAGCCGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGATGAGAGCATTGTGAGACAAATAGCTATAAATGAATTTTCTCGACAATACTTTATTAAAGATGAGCGCTATATCAGATTTATAAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAAATGTTTCATTATCACCATAAAGAGTAGTTTATGCCGCATAACTTCGTGTTTTGAG # Right flank : ATGTGTTCTTCTATAATCTTTATAATTAGAATACACTCATATTCCTCACACCTATTATTAGGATAGTTGACAAATTCTTCGGTTTCATGATAGAAAAGGATAGCTAAGAGCATTTATTCTTTTATTAAATATTCTTGTTGCTTCCAGTATCGGGTTAGTGATATTTTTCGGTACATTAATATTTGGTCCATAGCAGAAAGGTGGAGCCCCATGAATTTACGTTCAGGTTTATTAATTTTCTTTTTTATGATGTTCGTTCTATTAACTATCTATAACATTTATACAGAGATAATGAGTGATAATATTGCTGATTCATTAGGTGGATTTTATAGCTTATCAGTGCCGATGCTGGCTTTAGCATTTTATCCTGATTCAATAGATAAATCTTCTCGAAGTGTCCGAGTGTTTGTATATAGATTATTGATATTTGTTTACGCTGTTGTATTATTTAGTTTTATGATTAAATACCATGCGTCGTGGTTCTTATTATTCTTTGAAGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //