Array 1 8969-10278 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGLL01000017.1 Escherichia coli strain 11a9 NODE_17_length_134850_cov_84.7647, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8969 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 9030 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 9091 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 9152 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 9213 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 9274 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 9335 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 9396 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 9457 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 9518 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 9579 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 9640 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 9701 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 9762 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 9823 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 9884 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 9945 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 10006 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 10067 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 10128 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 10189 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 10250 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //