Array 1 6882-7156 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912472.1 Saccharomonospora halophila 8 SachaDRAFT_Scaffold1.88, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 6882 30 96.7 31 .............................G CGGCGATCACGTTGCTGGCACCCATCAGGCG 6943 30 93.3 31 ............................GA AGGGCGATCGGCTGATCTTCGCCGACGAAAC 7004 30 96.7 31 ............................A. ACCGTTTCGACCCTGCGGCCGACGACGTTGC 7065 30 93.3 32 ............................GT CGCGCCTGCAGGGCCAGGTGATCGAGGGCCGC 7127 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================ ================== 5 30 96.0 32 GTCTTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : TTCTCCGGCGCCGACCCCGAGGCCCGGGAACGGGCGGCGCTGAAGGTGATCGCCGTGTCGTTCTTCGCCCTGGCCGCCTATGTCGGGGTGGAGTCGGTCCGCGCCCTGTTCGGCGCGGCCGAGGCCGAGCACTCGACGGTGGGCATCGTGCTCGCCGCGGTGTCGCTGGTGGTCATGCCCGCGCTGTCGCTGACCCAGCGCTACGTCGGCAGGCAGCTCGGCTCGGCCAGCGCCGTGGCGGACTCCAAGCAGACGCTGCTGTGCAGCTACCTCTCCGGCGTGCTGCTGGTGGGCCTGCTGGCGAACAGCCTGTTCGGCTGGGCGTGGGCCGACCCGATCGCCGCCCTGGTCATCGCCGCCGTCGCCGTCCGCGAGGGCCGCGAAGCCTGGCGCGGCGAACACTGCTGCTGACGGGGGGCGTGGAGTGGTGATAGAAAGTGAACGAAAAACGCCGCTAAGGGCCGCATCGCCGCAGGTCAGAACGTTGCCGGGCGGTGTTT # Right flank : CAGTTGACGGCTGGGTACCTTCTGCGTCACTCGTGGTGACGGGAATGGTGTAGGTGAGTGCGTAGCGGTCTCCGGGGATCACGATGTCGCACGTCTCGACCGGCGTCTCGCCTGCGTAGAGGGTTCGCTCGATGGTGAGCACCGGGGTCCCGGTCGGGATGACGAGTGCGTCCGACTCGGAGGGAAGTGGTGCGCGGGTGGTGACCCGGATCGGGTTCCTGCTGCTCGAACTCGGCTTCACCATCGCCGAAGAAGGCGGCATCGACCCCGCCGGGATCGAACACGCCGTGTCCCACGCCTACGGACTCCCCACCGACTGAGTCCGCGGTGCCGCGTGGCCGGGTTGTGGGTCCGTGGTGCTCGACGTGTGGCCCGAGCGTCGGCACTCCGGCGCGAGGATCGGGTCAGACGGGTGGGTGCAGGGGGCGCCTGCCCTCACCGTCGCACCACCGGCACGCCCGCATCGTCAGCACCGAGCGGCCGATTCCGTCGAGCACGGC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 32217-34622 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912485.1 Saccharomonospora halophila 8 SachaDRAFT_Scaffold110.14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 32217 29 96.6 33 ............................G AAGGCCGACCGGTGACCCCCGAGGCGGCGGCGT 32279 29 100.0 32 ............................. GTGCGCAGCTCACCGGTGTCGTCGTTGGCGGG 32340 29 96.6 32 ............................G ACCCCGGATGAGCAGGCTATTGACGCTGCTAA 32401 29 100.0 32 ............................. ATTCTCGCCCCGCAGCGGCACGGCGGCCACAC 32462 29 96.6 32 ............................G TACCAGCGAAGGAGCAGAGTTGAGCACGTTCA 32523 29 100.0 32 ............................. CGAACACGGCCGGTTTCACGCGCGCGGCCAGC 32584 29 96.6 32 ............................G GCGGTCCACCGGGACGGAGCAAGATTCGTCAC 32645 29 100.0 32 ............................. CAGGCCGGAGCCATGATCGGACTGTCCCTGAT 32706 29 96.6 32 ............................G GTCAAGGCGGTCGTCCTCCTGCCGGACGACCT 32767 29 100.0 32 ............................. GGCATCACCAAGACCATCCCGCGGGGCAGCTC 32828 29 100.0 32 ............................. AGAACGCCGATCAGGGCGACATACGACAGCGC 32889 29 100.0 32 ............................. CAGCGCCATCAGGATGGTGATCGTCTGCGTGG 32950 29 100.0 32 ............................. ACGTTGCCGACGCCGATGCCGGTGTCGCGGGC 33011 29 100.0 32 ............................. CCTTCCGCGAGCGGTTCCACCACCTCCGCCGC 33072 29 96.6 32 ............................T CGGTATGGCGGGTGGCCGCGTTCGTCGCCGGA 33133 29 100.0 32 ............................. CTCGCACGTGGACGTGGGGCCGCGCCTGGTGA 33194 29 100.0 32 ............................. CCGGACGGTGCCGCGCTTCGCGCCGAGCTGCA 33255 29 100.0 32 ............................. GCGGGGGAGCGGACATGCGAAAACGGCCCCCG 33316 29 100.0 32 ............................. AGGTCCCAGGAGTCCTGGCCCGGGTTGCCGCC 33377 29 100.0 32 ............................. TCGGGTTCGACGTGCAGCACGAGGTGGTGCAG 33438 29 100.0 32 ............................. ACGCTGGTCAAGTTCTTCTCCGCGGCCCGCAA 33499 29 100.0 32 ............................. GCGGCCAGGCGCCAGGCGCCGTGGGTGGCGAG 33560 29 96.6 32 ............................G CTGGTTTCGCAACTTCGTCGTGCCGCGCGGGA 33621 29 100.0 32 ............................. GGGGGAGGATACCCGGCACCGTGTACCGGTAT 33682 29 100.0 32 ............................. TCGCCGCGGTACCGCTTGACCAGCGTGGCCGG 33743 29 100.0 32 ............................. TCGTCATCCACGGGGAAGTAGCTCACGCTGCC 33804 29 100.0 32 ............................. TGGGCGACAACCTTGGCGAATGGGATTACACG 33865 29 96.6 30 ............................G TGGCGTCCGCGGGGGGATCGGTCCCGCGAT 33924 29 100.0 32 ............................. GTCGCCGTGAGCGCGACCGGCACCCGGGGCAC 33985 29 100.0 33 ............................. GCGGCCTCGGCGCGGCGCAATCTGCCGTTACTG 34047 29 96.6 30 ............................G CCGGACATCTTCGCCGCCACCTACGAGGAG 34106 29 96.6 32 ....C........................ CCACCCCTCAGACACGATGGTGAAACCGAAAC 34167 29 100.0 32 ............................. GCGGCCAGGAAAGCGCCGACGGCGACGGCGGC 34228 29 96.6 32 ............................T TATCCGCGCGTTTGGTGAAGCGTTCGCCGGAA 34289 29 96.6 32 ............................G GCGTGGGCCGACCTCGACACCGTGCGGGAGGA 34350 29 100.0 32 ............................. CCGCGCCGCGCCATCCGCGCCGTGCAGCACTG 34411 29 96.6 32 ............................G TCCCGCTCGCCGTCGCCGTGGTCGGTGTCGAG 34472 29 96.6 32 ............................G CCGACGACCTGTCTCGGAATGAGCGCCAGGCG 34533 29 100.0 32 ............................. GCAGCCCTGCTGCGGGCGGCGTTCCCGGAGAC 34594 29 86.2 0 .CG..........G.......C....... | ========== ====== ====== ====== ============================= ================================= ================== 40 29 98.5 32 GTCTTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : ACGCGCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCACGGCCGCGCGCCGGTCCGGGCCGCCACGTGCGCCACGATGCGCAGGCCCTCGCCGTCGAAGTCGCCATGGTGGTGCAGCCGGGTACCGAGGTCCGCGGCGCGGCGCAGGGTGCGTAGCACCGCGCTGTTCGTGCCAGCCCGACGTACACACCAGCGGCGGGCACCGGGTGCCGAACCGGCCCAGCGCCATCGCCAGGATGCTCGGGTTCTCCACCACCCAGATCTCCGGCGGCGCCCCGGTGATCTCACTGTCCCGGAGCTCACCCTGCCAGGCTACGGGTCGGGGGCGACACGCCGGGTGGAGATGGGCCGAGGGCGGGTAGGGTGCGGGTCAGAAGTGAATGAAAAACAGCCTCACGGCCGACATCGATGCAGGTCATCAAGT # Right flank : CTTCATGCTATCCGGCCACGGCCCGGGACTGCCGTGTTCCCCGCACAAGCGGGGAAGACTGGGCAGCAGCGAATCCAGTTCCCAGTGCCGCAGGGACCACCCCGGCGCACGCGGGGAAGACGCATCACCTCAGGCACCGGGTGCGCGAGCGGACCACCCCCGGAGCACCCGGGGAAGACTCGCGAGCGCGTCACTCTCCCACTGTTCGGCGGGGACTACCCCCGCGCACGCGGGGAAGACTTGTTGACCTGCGGCGATGCGAGCCGTGGCGCTGTTTCTCATTCACTTGTCGGGCAGGAAGTATAGGCGCTCACGGTTCACCTGTGAGCGCCACGGGCACACATCCTCGGCCACGCGGGACCGCGGACTCAGTCGGTGGGGAGTCCGTAGGCGTGGGACACGGCGTGTTCGATCCCGCTGGGGTCGATGCCGCCTTCTTCGGCGATGGTGAAGCCGAGTTCGAGCAGCAGGACCCCGATCCGGCTCAGCACCGGCAGCGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 45967-46300 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912485.1 Saccharomonospora halophila 8 SachaDRAFT_Scaffold110.14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 45967 29 100.0 32 ............................. CGCCTCGCCGCATCCGGCGGCGGGGCCGCGAT 46028 29 100.0 32 ............................. CTCGGGTTGCACGTGTCTCCGTACTGGGCCCG 46089 29 100.0 32 ............................. AGGTTCTGCTGAGTGGCTTCGCGGATCGCGGC 46150 29 96.6 32 ............................T GGGGTGGTGGTGATGGGCAACCACCGCACGGG 46211 29 93.1 32 ..........G.................T GTCCGCAACATGGTGTTGCGAAAACTGCGGGG 46272 29 96.6 0 ............................G | Deletion [46333] ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTCTTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTACGACGGCCGGGAAGTGGCCGGCGGTGTCTCGTACGGGAGTGACGACGAGTGACCGTCGTCGTGGTGGCCGCCTGTCCGGTGGGGCTGCGCGGGCATCTCACGCGCTGGATGCTGGAGATTTCGCCCGGGGTGTTCGTCGGCACGGTCAACGCGCGGATCCGTGCGCTGCTGTGGGAGCGGGTGCTCGACATGGTGCAGTCGGGCCGGGCCATCATGGTCTACTCCGCCGACAACGAGCAGGGGCTCGCGTTCCAGGTCCACGGGCACGACTGGCAACCGGTCGACTTCGACGGCATCAACCTGATGCTGCGCCCCAACGCACCGGAGGCGAAGCCGCCGTCGTCCGGGGCGAAGTCGGTGGGCTGGAGCAAGGCGAGCCGCCGAAGGCGCTTCGGCAACCGGGGGTAGGAGCGGCCCGCAGGGGCGCTCCCGCGCGAACTCGCGAAGTAGAGTGAATGAAAAACGCCCTAGTACCTCACATCGCCGCAGGTCATTAA # Right flank : GGTAATGTCCATGATCGGCTGATATGGCGCGCGGTCTTCCCCGCGACCGACGACGAGCTCGTCCAGTTCGTCGAACGGCTCCGCGACTGTGCCTACCACCTCCGCAGCCCTCAGGCGTCCGGGGTCGTCGACCACGCGTTGAAGCGGGCGCATGCGGCCGTCGACCTGCACCGGATCGCCACCTGATCCGGTGGGCCTGTCGACCACCACTCCCACCCCAACACCCGCTACGATCCCACATCTAGTGGTTCAGTTCCTGCTCAAGCCCATTTGTTGTAGAAATAGGAGTCCATGGTGGAGGTCACCGTCGCCGAGAAGCACGTTCCGGGTGTGCCCCGCCGTCTGCCCCGCGTGCGTAGCGGATACCGGGTCGACGTCGAGATCAGCGGCACCGAATTCGGCGTCACCATCACCGTCGACGACCACGGACAACTCGGCGCGGTCGACATCGACCACTCCAAACACGGCACCGTCACCCACGGGCTCACCACCGCGCTCGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 47806-50094 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912485.1 Saccharomonospora halophila 8 SachaDRAFT_Scaffold110.14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47806 29 96.6 32 ............................G TCGCCGACCGCGCCGCTGATCATGCCGCGCAG 47867 29 100.0 32 ............................. GGCATCGCGCTGCGGGACGCGTTCCCGGAGAC 47928 29 100.0 32 ............................. AAGTTCATCCGCGACAACGACGGCAAGACGGT 47989 29 100.0 32 ............................. CGCGCGCATGGCGTTATAGGCCGCGGACCATG 48050 29 96.6 32 ............................T CTGCCGTTACTGGAGGCGATCAACGCGGGCCG 48111 29 96.6 32 ............................G TCGCCGACCGCGCCGCTGATCATGCCGCGCAG 48172 29 100.0 32 ............................. GGCGACATCGACTGGCAGATCTTCGTGTTCCC 48233 29 100.0 32 ............................. GTGGCAGGCTCGGGCGTCAACCGGGTGTAGAC 48294 29 100.0 32 ............................. GCCCTGCGGGGGCCGATCGATGCGCAGATGGG 48355 29 100.0 32 ............................. CCGCAGATGGTCATCTTCAGCGACGGGATCTA 48416 29 100.0 32 ............................. AGGAACAGCCACTCCTCAGCTTGGTCCGCGAG 48477 29 96.6 33 ............................G TCGGGAGCGCGATTCGCTGTCAACTTTGTGATT 48539 29 100.0 33 ............................. TGACCGACCTCAGCGTCCGGGCGGACACGGTAG 48601 29 93.1 32 .....T......................G CGCGCCCGGGTGGTGCTGTCCGGGATCTGTGG 48662 29 100.0 33 ............................. GGTGGGCGAGGAACATGTCCTCGGTGCGAACGG 48724 29 100.0 32 ............................. ACCTCGCGGGCCTGGTCGGCCAACCGGTCCCG 48785 29 96.6 32 ............................A TCCTCAAGCCACCGCTCGGCGACGTGCGCCAG 48846 29 100.0 32 ............................. CGCCGCGGCGGCCGGAGCCTCACAGTCCACCG 48907 29 100.0 32 ............................. GGCACATCCCGCACCGCGACGAACACCAGGAG 48968 29 96.6 32 ............................G CGGACTCCGTGTCTCCGTTCCGCCCGGACCCG 49029 29 100.0 32 ............................. GATCGGCTCTACCGCCAGACGTACGGGACCGC 49090 29 96.6 32 ............................G TCGCGATGGGGATCATTGGTATCGGGATGGCG 49151 29 100.0 32 ............................. GCGGAATGGTCGCAGGCCGCGACGGATTGGCT 49212 29 100.0 32 ............................. GTCGCCGAGGTGCCCTCGGAGTGGAACAGCTC 49273 29 100.0 32 ............................. TGGTCGAACAGGGCCGCGCCGAGGCCGAGACG 49334 29 96.6 32 ............................G CATGAACAACGACGTTGAACCGGAACGTCCGT 49395 29 96.6 32 ............................G ACCTCCACGCGGAACGTGGCCAGTTCCTCCCC 49456 29 96.6 32 ............................G GGCCGGGAGGCACTACAGCAGGCCGGGGTGAC 49517 29 96.6 32 ............................G CGCGACCCGGAGTTCCCGGCCCCGGTGGGGCG 49578 29 96.6 32 ............................A CCGTGGTTCGCCTACCGGACTCGACCCCCGGG 49639 29 100.0 32 ............................. CTGTCGAGTGATGTCCTGCGGCTGAGGGTCCG 49700 29 100.0 32 ............................. CTGTCGAGTGATGTCCTGCGGCTGAGGGTCCG 49761 29 100.0 32 ............................. GGCAAGACGACGCTCGCGTATGACCTGATCGA 49822 29 96.6 32 ..................C.......... CCGATCAGCAGCAGCGCGCGGTCCCGTAGCCC 49883 29 96.6 32 ............................A CGGCCGTGATCCGTGGCGGGGAACTGCTGGAG 49944 28 93.1 32 .......T.........-........... CCCTTTACCGGCGCGTGCCCATCGCGGTCCCG 50004 29 86.2 32 ......G..............A..C...G TACTCGTACGGCTGGCTGGACCATGCTTCGGC 50065 29 75.9 0 T.........TC........T..T..G.T | A [50082] ========== ====== ====== ====== ============================= ================================= ================== 38 29 97.4 32 GTCTTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTCGCCCCGACTGGTTCCCGTGAACGCCACCGCCGAAAGCGTCGCCCGAGGTGAGGCGCCGCTCCCGTACCGGAAGTTCGACGCCGTCGTCGTGAAGGAAGCCCAGCACCACGTGTCCCGCGACGTGCGTGAATCCACAGTGCGCGGCTTGGCTCGGCTGCTCGCCCCCGACGGCCGTCTGATCGTGGTCATGATGCCGACACACTGCTGTGGACATCAACACTTCACCGATGCCGAACTCGACGCGGGAATTACCGAGATTCGCCGCACCAACCCGGGTGGCACAGTCACCTTCCCCGACCGGTACACGGTCCTCGTCGCCCACTGACGGGAGTGGCAGGCGGTGTCTCGTACGGGAGTGACGATGAGTGACCGTCGTCGTGGTGGCCGCCAAGGAACGGCCCGCAGGGGCGCTCCCGGGTCTGTGGGGCAGAGCGAACCCGCGAAGTAGAGTGAATGAAAAATGCTCTAGTCCCTCATATCGCCGCAGGTCATCAAGT # Right flank : TCTCTCGGGTCGCTGACGTGCAGTTCGACGTCCTTCTGCGGGTGCCTCACGTGCGTCCCCGTGCCGGGTGGTGGCCGGGTGATCCGCGAGTCGTCTACTATCTCGGCTAGTAGTAAGGCTCGGAGGTTCCATGCGACACGCTGCATCCGGTCGGCTCCCGGCACTCGTGCTGGGGGCCGGGCTTCTCGTGGGCGCCTGTGGTGCGCCGGTGGAGGACGCCACGGCATCCGGGGCCGGTGGTTCCGGGCCCGCGTTGCCGGAGCCGCGGCTGGACACGTCCACCTCGGCGCCCCTGCCACCTCCCGGAGGAGGCGAGGCGCCGGTGCTGGCGCAGCCGGAGGCCGCCTGGAAGGCGCCGTTCGACGACGTCCCCTACCCGGCGGGGGACAACCTGGTGAGCATCCGGTTCCCCGCCGACGACGAGTCGCAGCTGGGGGTCGTCGGGGTGACACCGTCCGGCGAGACCCGGTGGACGGTGTGGACCAACCCGTCCTGCGTCG # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //