Array 1 66-1113 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXUF01000006.1 Pseudomonas aeruginosa strain MRSN346179 MRSN346179_contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 66 28 100.0 32 ............................ GCAATCGATCAGGCTATGACCGCCGAAGCCTA 126 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 186 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 246 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 306 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 366 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 426 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 486 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 546 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 606 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 666 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 726 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 786 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 846 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 906 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 966 28 100.0 32 ............................ TCGCGCAATGATTTCAGCCGCGGAGCGCATAG 1026 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 1086 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAAAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //