Array 1 209745-199549 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPOR01000038.1 Bifidobacterium sp. wkB338 jtg7180000000553f_7180000000554f, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================================== ================== 209744 32 100.0 35 ................................ CTCAAAATGCCGGTTGGTCTGACTCCCTGCAAAGA 209677 32 100.0 35 ................................ TCGACTGCATTAAGCAGGTCGTCATAATCCTTAGC 209610 32 100.0 37 ................................ CTGCCCGTAGACTTCAAAATGATCTATGATCTGTAGG 209541 32 100.0 35 ................................ CAGTAGTCGGCTGGGAGGATGGCGTTTGCGAAATC 209474 32 100.0 34 ................................ GAGACCAAAGAGCAGCACTACTATAAGGTGGTGG 209408 32 100.0 35 ................................ TGCACAAGCTGTGGCTGCAAACGCTGCTAGTTACT 209341 32 100.0 35 ................................ ATCCGTCTGCCAGTAGTCCGCAGGCAGGATCGCGT 209274 32 100.0 35 ................................ CCCTGGAATCCCTTGTTCCAGGCGGCAAAGTCCAT 209207 32 100.0 34 ................................ TTCGATAATGGGGCTGTTCCAGCCGGGATGATTG 209141 32 100.0 34 ................................ ATCGTTCATCCCAGTGGTCTTGTGTTGGATGTTG 209075 32 100.0 34 ................................ GCGGGAAAATCGAGGAACAGCTTCTGGGCGTATC 209009 32 100.0 35 ................................ ATTTCAGTCTTTTACCGGGAAATGCAGACGACAGA 208942 32 100.0 37 ................................ CGCCGTGGCGTGTGTGACCGTGTGTCACCCGGTATCA 208873 32 100.0 35 ................................ CGCATAAGCCATAACATCCAAACCGGCCAGCGTAT 208806 32 100.0 33 ................................ AATATCCGACGCGTGATGGACTGACATACGCAG 208741 32 100.0 34 ................................ CGCTCACGCCGGGCCGAGGCCCTGGGAGGCGACG 208675 32 100.0 34 ................................ TACAAAGTCAGAGCTTAATAAGGCCAAGGAATTG 208609 32 100.0 33 ................................ TGTTCGGTGGTGTTGATGGTGCGCACCGAATCC 208544 32 100.0 35 ................................ CCCAATGTCGTGTCCCTGCCGAGCTCGGCATTGGC 208477 32 100.0 34 ................................ CAATTGCGGTCTACTAAGCTTGTTCAAAGTGCCC 208411 32 100.0 36 ................................ ATCCCATGTATCCGGCGATCCGAAAATGGCGGTAAG 208343 32 100.0 33 ................................ TGGAAGAAAACGGGATCGGTCGTCTGGTTTCCG 208278 32 100.0 35 ................................ TTGGTGGGACGATTCGGGTCTTGAGGGTGAATACG 208211 32 100.0 34 ................................ TCCAACGGCAGCACGCGGGGTTCAGAACTCGGGT 208145 32 100.0 33 ................................ CTTGCCGTGGGGCGTACAGCATCATCAGCGTGG 208080 32 100.0 35 ................................ AAGGTGCCGGTGGATACCGTGTACCACCAACGCGA 208013 32 100.0 35 ................................ CAAAATGCTTGACAATCTGGTGGGGAGATGTTATA 207946 32 100.0 34 ................................ AAGGTGCCGGTGGATACCGTGTACCACCAACGAG 207880 32 100.0 34 ................................ CAAGAACATGAGCGTCAAGGATGTGGATATTCTC 207814 32 100.0 34 ................................ ACTACTTTGGCGATGCCTTGGATGACGCTTGCGA 207748 32 100.0 34 ................................ CAGACGCGAGTCCAGTCACCGGAGAAAATCCCCG 207682 32 100.0 34 ................................ ACTGAAGCCTGGGCACTCTGAGCGATATGGTGTG 207616 32 100.0 35 ................................ AAGGTGAGACCATATTGAGAATCTCCCCTCATCGG 207549 32 100.0 34 ................................ TTGGGGATCGATGGGATCATCCAGGTGCCGTGGC 207483 32 100.0 33 ................................ CTCTCCGCGTCGGCTGGCCTGCCGTATCATATG 207418 32 100.0 34 ................................ ACAGCCAGGATGGAGTTGCTTAGTTGCTGCATTT 207352 32 100.0 34 ................................ ACGTTTGGTCCACACCCTCCCTACATGCTGCACC 207286 32 100.0 35 ................................ TGCGGTCGTGGACTGGGTTAATCGCGAGCTGCCAG 207219 32 100.0 34 ................................ AACAAGTAGCGCAAAATGCCGGTTGGTCTGACTC 207153 32 100.0 35 ................................ GAAATCTGCCTCGTCGCATGCGTCGCCCCAAGACA 207086 32 100.0 36 ................................ TGAAGCGGGGTTTTTCGTCGGATGGGCGGAAAACCG 207018 32 100.0 36 ................................ GGGTTAGAGCCGGGGCTACTCAACAGATCTCCTGAG 206950 32 100.0 35 ................................ TCGTCAACAGAACACCAACCTACAGAACGCTCAGG 206883 32 100.0 35 ................................ CAATCGCCCATCGGCTACTATCACGCGAATAGCGT 206816 32 100.0 34 ................................ AGTGCTTCTAAGTGCTCTTTGAGTCGTCTGGCTG 206750 32 100.0 33 ................................ TGGTGGTCACAGCAAGCCAAGCCACAGATTGTA 206685 32 100.0 34 ................................ TGGCGGCACTGCTGGGTGTGCTCGCTATCGTCAT 206619 32 100.0 34 ................................ GACGCCCAGGAGGACTGGCCCATGGTGTTCGGCA 206553 32 100.0 34 ................................ ACAGGAAGGCCGTACAGGAATCGTGGGACATCAT 206487 32 100.0 36 ................................ CTGGATCGCCCTTGTCCCCCTTGTCGCCTTTGGGAC 206419 32 100.0 35 ................................ CCTACGGGTGGGAATGGCTGGCTGGCAATGAGCGT 206352 32 100.0 33 ................................ AGCTGTATCCTCGGTCTTGCTCTGCTGCTGCGA 206287 32 100.0 35 ................................ TGATAAGTGGCGAGATACCGCCGTTTCCCAACCCT 206220 32 100.0 35 ................................ GACATCTGCTTCTTCGCAGCCAGCGTCTTGACTGA 206153 32 100.0 32 ................................ TGATGATACGGTCGCGCAGATGGCTGGTGGTC 206089 32 100.0 33 ................................ CACGGCTTTTTGTGCGGTCGGCTTCCTCGCCTA 206024 32 100.0 35 ................................ GTGTTGTGCCCGGTCTCACGGTTGGCTGGCCGCAG 205957 32 100.0 35 ................................ TTTGATGGAGCGTAAAGCCATAGTACCTTGGTCAT 205890 32 100.0 36 ................................ CATCATCACACAGACCGCCAAACGCTATGTACCCGA 205822 32 100.0 35 ................................ CCGGTCTTGGGGTCGTCATGCTCGCCAGGGTCCAA 205755 32 100.0 35 ................................ CTCATCCGCACCATCACCGGCGGACCCGACCAGGG 205688 32 100.0 34 ................................ CCATACCTGACGATGATGGTTGGAACGACGGCCA 205622 32 100.0 35 ................................ GTCATTCAGATGGGAGACCCGGTTGGAGACGATTG 205555 32 100.0 34 ................................ CCGGTGGCTTTGGCATAGTCGAGTATCTCATCCT 205489 32 96.9 34 .......................C........ CCCGACGGCCCCAGGCTGACAGCCGGCTGCCTCG 205423 32 100.0 35 ................................ CTCAAGCCCCTGCGCGGCCACACGCCATTATCAGC 205356 32 100.0 34 ................................ TTTATACCAACGCTGGACTGCCTCGTCCCTGCTC 205290 32 100.0 35 ................................ TGAGAGTATTTGGGTATCGCGGATTATGTGATTAT 205223 32 100.0 35 ................................ ATCTGCCCGACACTTGAGCGTGGTCGTGCCCTGGA 205156 32 100.0 34 ................................ CAGTCATACCCGAGAGGTGTGGGCTGACGGCTTG 205090 32 100.0 34 ................................ CCAATAGCGGATAGCCTGCTGCGAAACTCCTAGG 205024 32 100.0 33 ................................ CCACTCTACGGGAGGGACTCTAACGGGGTGCTC 204959 32 100.0 34 ................................ AAGGGCGATCTCGACGATACGCAAAAGGTCGGTC 204893 32 100.0 34 ................................ TGTTTGACAATCCTATATTACTGAGTAATATAAG 204827 32 100.0 33 ................................ ACTTATACTAAGTCAACAGCGTACAAGGCAGAT 204762 32 100.0 34 ................................ ATATCGATGACCTTGCCAAAGATGGCCTCGTCGA 204696 32 100.0 36 ................................ GAGGACTGACTGCAGTGGGGGGATAATGGGGATGAT 204628 32 100.0 34 ................................ CCTATAAGGCCCGCATCCTGCGGGCCTTTTGCAT 204562 32 100.0 35 ................................ CCGCCTCGGTACATACTTTCATAGGCGGTTGGGCG 204495 32 100.0 35 ................................ TTGAGACTTTTGGCGGCACAAGCAAACTGGATATG 204428 32 100.0 35 ................................ ACCATACACGGCCATAACCTCCATTGTGGATGATG 204361 32 100.0 35 ................................ ACAGCGGCACGAAACGGCGTGACTAATGCCTTTGG 204294 32 100.0 33 ................................ AGCGAGGCACCAACGAACATTCCAAGAGGGGCG 204229 32 100.0 33 ................................ GACGGGGTGGCCTACCGTGAGGCGAAGCCGGAC 204164 32 100.0 33 ................................ ACGTGAAACATATCCGCCATACCCGTTGACCAC 204099 32 100.0 33 ................................ ATCGTCTCGTCGGTCCCTCCGCCCGCCCCTGTG 204034 32 100.0 34 ................................ CAAGAGGGTCGGTGACCATCACGCCGGCCACCAG 203968 32 100.0 35 ................................ CCGTTCGGTGACGCGAAGCTGATCACAGCCGTCAG 203901 32 100.0 35 ................................ GGGAGTAATCGCCTGAGAAACACCGAGTACAGGTT 203834 32 100.0 35 ................................ TGCGGTTCCATGGCAGGCGAGTGGGTGCTTGGCGC 203767 32 100.0 33 ................................ AGTCGCAAAAACAGCAGGCGGCATCGCCAAGAC 203702 32 100.0 34 ................................ TGGGCCAGCGTCGTGATGATGGAAGTGACGATGA 203636 32 100.0 34 ................................ GGGAAAATCATGCCGCCTTGAGTGCGGGCTAATG 203570 32 100.0 33 ................................ TCCCTCTCAGTAGTGACCGGTCTTAGCATAGGG 203505 32 96.9 34 .........C...................... TTTACGCGTCAATCTGACGTGACGAAATTAAGTG 203439 32 100.0 34 ................................ CTCTGGTTTTCGGTGGGTGCCTGCCCTCCAGGCG 203373 32 100.0 34 ................................ CGGTACGGTTCAGCCTCCAGCTCCGGCGATGGGG 203307 32 100.0 35 ................................ ATCGAAGACACCAAAGAGGCAATCCGCAAAAGTGG 203240 32 100.0 35 ................................ TGTAATGCTCGTGTGCTGCCATGATATAAGGTCTG 203173 32 100.0 33 ................................ TGTCTGCAACTGTTGGGATGGTTGGCTCATGAC 203108 32 100.0 34 ................................ ATCGGCAGTGAGCAGTTTGACCCCGAGCTTGTGG 203042 32 96.9 34 .........C...................... ATCGGCAGTGAGCAGTTTGACCCCGAGCTTGTGG 202976 32 100.0 36 ................................ TATGGCTCAACCCAGAACAGCCCACAACACCCGATG 202908 32 100.0 34 ................................ ACTGTATGGCCCAGCGGCGTTCCGCAGGAGAACA 202842 32 100.0 33 ................................ CTCGCTACGGCGCAAGTAGATGAACTGGTAGCC 202777 32 100.0 35 ................................ AGCGTGGATGATGGGTACATCCGGTCATTGGACTA 202710 32 100.0 34 ................................ AGGCCCGTTTATCACGTCTGACAGTTCTTGTAGC 202644 32 100.0 33 ................................ ACGACGACTGCCGACTTGATGGTACGAAGACCA 202579 32 100.0 34 ................................ TACTCGGCAGCCGGGTTTTCTCATGCCCTGCCGG 202513 32 100.0 34 ................................ CGGTGGATTGGGATAGGGTGTGTCTGGGCATGGA 202447 32 100.0 34 ................................ GGGAAAATCCTCATCAGGGTCTGAACATTAGGGA 202381 32 100.0 34 ................................ AGGCTTGCGTTCCTGAAGACACGCCAACAGGCGT 202315 32 100.0 34 ................................ ATCGAGGGCGCGACGACGGCGGACCTGCCCCTGT 202249 32 93.8 35 .....C..................C....... TTTTTTGTGACTTGCACCACTGTACCTGACACACG 202182 32 100.0 34 ................................ ACCGGGCGCGCGAGGCGTCCGGCGCAGCCATGCG 202116 32 100.0 36 ................................ ATCAACCGCCCCAGGGTTGGCGACTTCACGGGCGAA 202048 32 100.0 34 ................................ ACGATGAGCCAAGGCGATCCGACCACACTGGACG 201982 32 96.9 35 ..................T............. TTATCAAGATACCGGTCCCAACAGCTGATGAAAGA 201915 32 100.0 35 ................................ GGCGAGAACGGCAAACTCATGCCGGAATGGAGCGG 201848 32 100.0 33 ................................ ATGTCGCCCCGCACCTGCTGGGCATCAAGCCAC 201783 32 100.0 35 ................................ GACTGGATATCTGCACTGTTCCCGCCAGCCAATAA 201716 32 100.0 35 ................................ GTCAAGCCGCTGGGCATGTGGCAGCGGCCCGCAGG 201649 32 100.0 35 ................................ ATTCATACGGCGCTTGGCGGGGTAATAACTTACGT 201582 32 100.0 34 ................................ CTTTTAACCGCGCTGTGCTCACATAAACATGGCT 201516 32 100.0 36 ................................ TGGTGGTCACGGCAAGCCAAGCCACAGATTGTAAGA 201448 32 100.0 34 ................................ CGGCTTGAATTGGTCCGCCTCGCTGGTCAGCTGC 201382 32 100.0 34 ................................ AGGATGATGGCGCAACAATAACCATCACCCCATC 201316 32 100.0 35 ................................ GTGACTTTGTGTCCGATATTTGGAATGCTATAAGT 201249 32 93.8 34 ........T...............G....... TGAGTCAACGTTGTGATGATGGAAGTGACGATGA 201183 32 100.0 34 ................................ TTTATGTGTCTCTCACTGTACCACGGTTCAGTCG 201117 32 100.0 34 ................................ CACAGCATTAAGCAGGTCGTCAAAGTCCTTAGCA 201051 32 100.0 35 ................................ GTACATCTTATTGTAGTACGGCATGATTTCATTCG 200984 32 100.0 34 ................................ CGGAAGACGACCCGGTCCCTGCCGTAGGTCAGGG 200918 32 100.0 34 ................................ ATGTGGCACGTATCGCCTATATCGACCAGCATCG 200852 32 100.0 34 ................................ TGCCAGGAGTGCGGCCAGCTCAACGACCTGACGC 200786 32 100.0 33 ................................ TATGGCTCAACCCCGAACAGCCCACCTCACCGG 200721 32 100.0 34 ................................ TTGGGCCAGTCGATCCAGTCCGGCAGCTCCGGCT 200655 32 100.0 34 ................................ TCCTGCTGGTCCCTGGCGATGGCCAGGGAGAGCG 200589 32 100.0 35 ................................ TCACTGGTTCGTCTCCGGTAACGTCCTACTCGTAG 200522 32 100.0 33 ................................ CGCGACGAGGCCGAAAAGATCAAGGACCGGACG 200457 32 100.0 33 ................................ ATAGGAGACTTGATATGGCAAACACACTGCCTG 200392 32 96.9 34 ....T........................... TTACAGTGTACTATCCTGTCAGCGGTTACATGAA 200326 32 100.0 35 ................................ CGGAATTGGATGCGGAGATCGACCAGGAACTGCGC 200259 32 96.9 34 ...C............................ CCAACTGGCACATCATGCTCGACCAGGTGCTGGC 200193 32 100.0 34 ................................ CTGAACAAATCCACCAGTTCCACGGCACCCTTGA 200127 32 96.9 36 .....................C.......... CTTGTTTGCTTGGTTTCTATGGCGGCGACCGATAGT 200059 32 96.9 34 ............................G... GCCAAGTCACCGTCCCCGTCGTCACGTCGGCCTC 199993 32 100.0 34 ................................ ACGATGACCCCCATGTGGAAGGACACGGACACCA 199927 32 100.0 34 ................................ CTGGGCACCTGTTTCAATATCCAGTCGCCACGTG 199861 32 100.0 33 ................................ ATCAGCGACGCCGGCGCTGTCCGAGATCAGCAG 199796 32 100.0 34 ................................ TGGGAGGCCTACATATGATCGAGGATTACCAGTG 199730 32 81.2 34 .C.A....T...GT...G.............. ATCAATGCAAAGGCAAAGTTTTCACCATCCATGG 199664 31 78.1 51 ......T............T....-..C.CGA GGAGTTCGGATTGAAATGCCCAGTCTTGGGCCCACTAAGGCAATGAGAACG A [199647] 199581 32 84.4 0 .A.....T....GT.....T............ | G [199553] ========== ====== ====== ====== ================================ =================================================== ================== 154 32 99.4 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTACTACGGGGTGAGGCGTCATATTCCTGTTGACCAAGTGATGATGTTATAGAGTTATGTGTCTTTGGTTGTACTGTTTTGTTTGAGCCACGGAAATTAGACGATAGCTAAGTGGCTGGTGTAATTCTGTAAACGGTGCAGTATGTTGACTACTGTTGTTGTGGATCAACGTTGGCGCGAAACGCTAGCAATCATGTATTCACCTGATCCTTCGCGCCGCAAATCTTTACTTCATGACGATATACGGTCTTAATTTCGCATGTTTTTGAGCTGAGTTCTTTTCGCATTTCAAATCAGACGGCTATTTATACGAAGGAAGCTAGAATTTTGGTGAATCGGATGAACAGTTGTTTGATAACTGAATAGTGATGTTATCAACTTGAAGCATCATCTCAATTGCTCGACTAGAAAACAGAAGCTGGATACCTAGTTCGGGCTGTTGGGAGTTGTCAGCCATTTAAAGCTGATCATATATTGGTCATTGGATGTATCATTGTGCT # Right flank : ACTGTTACGAACGGCTCTCTGCCTGCGGCAAATGCATTGCCTCCTACGTGGAAGCCTAAAACGGAAAACTAATCGCGCTACTTTGAATTAACCAGACAGCACTGCCTCTTAGCTGGAATATGTATTAAATCAGTTCTTCCCTCAGAACTCTTTTATAAATTCTGCTCCTCAAAAACATGAGTATGAGTTGCTGCTTTGGCATAGTACCGATCATTTTCATGCCATTCTCCCATTCCTAGGCGCGGGTGTGCCGCCCGGTATAAGCTTGTAGGCGGTGTGTCCACGAGTAGCGGACTTGGAGGTGTGGTCGCCGATGGAGCAATTCGACGATGCAGGTGGCGCGGAATCCGGCAGAAGTGATGCAACCGGTTCTGCATCTGTGCCATCGCACCTGGATGACGCGACTGCTGTGAACAAGGTTTCGGCCCACCCTGAAGCGACTATTCCGGATTCGGAATATTCTCTGGCTGAGATTGAGCAGCGCCGTGCCCGTCCGGTCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [29-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //