Array 1 61012-60800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRMX01000004.1 Arcanobacterium sp. S3PF19 contig04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61011 29 100.0 32 ............................. ACTTTCAGTTCTCCTCTTGCCATATAACTATT 60950 29 100.0 32 ............................. TTGGTGCGTACACGCCATTGCAGTGTTGTCTC 60889 29 100.0 32 ............................. GCCTGTGCGAGGGCCCTGCGCTGTTGGCCCCA 60828 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GGGATCACCCCCGCGTATGCGGGAAAGAC # Left flank : ATGCACGCATCGCCCCATTCAACAC # Right flank : ACTTGAAAACCCCAATAAAATAACCATTTCCATGAAAGAAACAGTCAAATTTCATTTACTTTCAAAACATCCCCTGCGGTAAACAATAAAAAATTATACATCTAAGGGATTAAATTTAATAACCTCCTTATTTTAAGCACAAGGCGGGAAGTCAATCTGGCATCCGGCAGAGCCCGGTGCAAAACCGGTTCGGCAATGCCATACTCGCGCAGAACAGTTTCCAACTTATAATCCCGCAAAAACATTTTATCCTTTTTTACAAAACGCATTACGTCAAAAACAGCATTATTGGAAATAATACTACAGTCAGCCTGCATATCTGCCGATAATATGGCAGCTTTCAAAAAAGCCAGGTCAAAAAATACGTTATACCCAACTATCGGTAGGCTACCTGTAAAATTCAAAAAATCAGGCAGAGCGTCCGACAGCCCAACGCCGTATAAATCCAACATTTCATTCGTGATACCGGTCATTTGGGTAATATTCTTCGTTACAGAATA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGATCACCCCCGCGTATGCGGGAAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 973-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRMX01000006.1 Arcanobacterium sp. S3PF19 contig06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 972 29 100.0 32 ............................. TTCGGGGGAAGATGGCGGCGGATAGAGGATGT 911 29 100.0 32 ............................. ACGTCCCGCGTGTTCCGTCCATGTCTAGGGGT 850 29 96.6 32 A............................ ACTGCGGGTTTGGCTGCTTACCCTGTGGGCAC 789 29 100.0 33 ............................. TTGGAAAACCAGGCCAACGGGATCCGCACATGG 727 29 100.0 32 ............................. GTGCGCGTGGCGGGCGTATAGTAGTCGCGCCC 666 29 100.0 32 ............................. CGACGGTTGCCGCGCATCGGCACAGATACCCG 605 29 100.0 32 ............................. AAGAAATCAAAGCGATAGCCGACGTGCTAGGC 544 29 100.0 32 ............................. GGGCTTTGGGTGCGGCCCTTTCGGCCACGGTG 483 29 100.0 32 ............................. TTCGGGGAGGTATTTCGCGGCGCGGCCTTCGA 422 29 100.0 32 ............................. TTGGCCTCATAGTCGTCCCCGGGTGTGTTTCC 361 29 100.0 32 ............................. TTAAAACCGCCGCACAGTTGCTGGATGTACAC 300 29 100.0 32 ............................. CCGTATCCTATATTGTTTGTTCTCTGCTGGGT 239 29 100.0 32 ............................. CCCGCCATAACCCAAAAACACAGCGGGTACCC 178 29 100.0 32 ............................. TTTAAGCAATACGTCCGCCGCTTTTCAGCTTG 117 29 100.0 32 ............................. ATCATATTTCGAGATCTACAACTGGGACACAT 56 29 96.6 0 A............................ | ========== ====== ====== ====== ============================= ================================= ================== 16 29 99.6 32 GGGATCACCCCCGCGTATGCGGGAAAGAC # Left flank : GCCGATGTGGTAGGCACAAACTCCCATCCCGTAGCGGCGGCAGGGAGATATTCCCTATTGCATACGGGTTGGGAAGAAACCATGCTGTCCTCGCTTGTGGAAAGCATATGCTGTAGGGCGTGGATTGTGGCTTTGCCAAACCATCCGTCCACTTTCACGGGGTAGCGCACACCCGTGCCCGTGCCCGCGCCTGTAGCGGCTGTGCCTGTGGCTGTGCCTATGTAGCGTGGACGGTAGATGCAGTAAACCCCGCTGCGGGTCCTGCGTCTGCGCCACACCCCATTACCCGCCGACTGTGAGCCGCGTGTACCGGCAGAAGTATTGCCCTCAATGGTTTGTACCCAGCCCGAGCCGAGATTACGCTCCACCAATCCCACGTGATCCGTGCGCCCGTTACCGTCCCAGTCGAAGAAAATCACATCCCCGGCGCACGCATTGGAAAAATCCACGCGGGCACAGCCCGCACTGCGCATCGCCGCCACCATCGACATGGTGTTATA # Right flank : CTCACCGATAGTGTGCGCGTAAACATCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGATCACCCCCGCGTATGCGGGAAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //