Array 1 450903-454584 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCWD01000001.1 Macrococcus carouselicus strain ATCC 51828 NODE_1_length_1168712_cov_27.245, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 450903 32 100.0 33 ................................ TGACTCATCGGATTTTCGGTGTTATTGTGATGC 450968 32 100.0 36 ................................ CTCCTATGATTTTAAAATTAAATGCCCATCAGCCGT 451036 32 100.0 34 ................................ AGCTGTCATGACCCCTGTCGTATAGCCGATAACC 451102 32 100.0 34 ................................ TTTGCAATTTATATTGAGAGGAGGTGAAACTAAT 451168 32 100.0 35 ................................ TTATAAGCGCGGTTCAGGTCAGATTTAGATGCTGC 451235 32 100.0 34 ................................ AGATAGCTGCCTTCAGAAAACCCTTTTTCTACTC 451301 32 100.0 34 ................................ ATCGTCGCTGCATCTAACACAATCCAGACTCAAA 451367 32 100.0 37 ................................ ACGGTATGAAAAATAATGCTATGGATGGCATTGGCGC 451436 32 100.0 35 ................................ TTAAACTGAGTTCTAATTGAGTTAGGATGCGGAGG 451503 32 100.0 35 ................................ TCACGTAATTGTCTGCCTTGTCTTCCAGGGCTTCG 451570 32 100.0 35 ................................ TTTTCAGCCGGTTTAGGGTTATCAATCCTACCACC 451637 32 100.0 33 ................................ GATATCTTTCAGGAATACATTATCTACACTGGC 451702 32 100.0 35 ................................ AGAAGGGGGATCGTGTTACTGCAGGTCAGATTGTC 451769 32 100.0 34 ................................ TTATCTGTCATGAGGTATCGTCTGAGCCGTATGC 451835 32 100.0 33 ................................ GTTAACACCTTTGTCGCAAAGAGTCTAAAGTTT 451900 32 100.0 35 ................................ CTGAGAAGCGGTTGCTATTATTTTTACGCTGCTCC 451967 32 100.0 35 ................................ TGATGACACCGTGCATGGTCTCGCGGTCAATGTCA 452034 32 100.0 35 ................................ TTAGTATCATTAGAGGACAGGATATTAGGGAAGTA 452101 32 100.0 34 ................................ AAGTCATACTTTTTAAACTTATCACTAACTCGAG 452167 32 100.0 33 ................................ CTTTCGCACGTATTTTTCGAATTTTTCTTTCAC 452232 32 100.0 35 ................................ TGTTTTAACGATCTGTCTTTCTTCTTCCAGCATCT 452299 32 100.0 34 ................................ AGTTGCCTTCTGAAACTCTTTACCAGTTAGATTA 452365 32 100.0 35 ................................ CCTTTATCTGAAGAAGAAGGTACAGGATAAGCTGT 452432 32 100.0 34 ................................ AGATTGACTTTACTATTATCAATCTCCTCCTGCG 452498 32 100.0 35 ................................ TATTTGATTCTTTCTCTTATTCTGATGATGTCATT 452565 32 100.0 33 ................................ AGATGTCGGAATCGTTTTAGTCGGAATAATAGC 452630 32 100.0 33 ................................ GGCTGTGGCAGCTCCATACCATCGCTGACAGTC 452695 32 100.0 35 ................................ TTTGTAGCCTGTCTTTGTTTCCTTGACGTCTCCTT 452762 32 100.0 34 ................................ ATTCAGCTGTTTGAATACCGCCTGACGAGATGCA 452828 32 100.0 34 ................................ ATAAGTCAACCTCCTTGATTAAGATGTTTTGCCT 452894 32 100.0 34 ................................ ATTGATTAAGAATCCGAAATGTTTTTTTAGTTCA 452960 32 96.9 34 A............................... AATACTATCCGTACAGGCATCCAACTTGCTGCAG 453026 32 100.0 35 ................................ GTACTGCTTACGCATCTTTGCGAGCGCTCTTGTAC 453093 32 100.0 33 ................................ AGTGATTATTACAGTCTTATCCATTCTCCACTC 453158 32 100.0 36 ................................ AGAAATGCTGTTAATACATTCGTTTCTGGATGGCTT 453226 32 100.0 33 ................................ CTCGGACGCCTGAAAGATGGCTTTCTGTATATC 453291 32 100.0 33 ................................ CTCGGACGCCTGAAAGATGGCTTTCTGTATATC 453356 32 100.0 35 ................................ ACAAATCTGTATAAAGGTACAAACACAATCTTTAC 453423 32 100.0 34 ................................ GAGTACAGGTGCTAGCTTCATAAAAATGCCCATC 453489 32 100.0 33 ................................ AATTCATTGAATGCATAACCCTTATCTGATTTA 453554 32 100.0 35 ................................ TACTAAGAACATCAATCATATTTTCTGTACTAACC 453621 32 100.0 33 ................................ AAATCATCATGTCTGTACTACTGCCGATTCTGG 453686 32 100.0 34 ................................ AATCAGCTCGATGACTTTCGTCTTGAGCGTCTCT 453752 32 100.0 37 ................................ ACCAACTGGATCTTGAGAAATAACACGGTAAGCGAAT 453821 32 96.9 36 ....................A........... TTAGGCTCGACTACTTTAGGTGGTGCGATAACAATC 453889 32 100.0 33 ................................ GATGTCGTCGAGTGTGAAGGAGTAGTGGTCGAG 453954 32 100.0 34 ................................ AATGACTACGATGTCAATCTGTTTGCCTGCGTCC 454020 32 100.0 33 ................................ TTGATGTCATCAGTAAAACCTTTAAGTATCGGC 454085 32 100.0 33 ................................ TGCACTGACATGAAGGCCGTCTCATAAGTTAGA 454150 32 100.0 35 ................................ AGAAGATAGCCTATGACCGCCATAACGCGTACAGA 454217 32 100.0 36 ................................ ACCTTGCGGTACGCCGTTACGAATAACAACGTTTAC 454285 32 100.0 35 ................................ GATAAAAGATAAATTAGTTATCTCTTTTTTAACGG 454352 32 100.0 36 ................................ AATAGTAACGTAGCCGTAATTAATACAGTTGTTTTG 454420 32 96.9 35 ............G................... ATAAAACATGTTTTCCACCTCTTCTTTTTCTTCTT 454487 32 96.9 34 ............G................... CTTCAGGTGTATATAATCCGATGATAAACATTTC 454553 32 93.8 0 ............G..............A.... | ========== ====== ====== ====== ================================ ===================================== ================== 56 32 99.7 34 GTCGCACCTCACATAGGTGCGTGGATTGAAAT # Left flank : GTTACTTAGTAGACACATAAGAAAAGACCTTGAAAGTTATCCACCATTTCTGTCATAAGGAGAATATTATGCTTGTATTGGTTACCTATGATGTAAGTACGATTGAGAAAAGTGGCAGAAAGCGACTCAGGCAAGTTGCTAAAAAATGTACAGACTATGGTCAAAGAGTTCAGAATTCAGTGTTTGAGTGCAGCGTAGAACCAGATCAATATGTAAGAGTCAAGGCTGAATTAGAAAAAATTATAGATAATGAAACAGATTCATTACGATTCTATCTATTAGGGAAAAACTGGGTGAGACGAGTGGAAAATATAGGTAAAAGTGATGCGTATAATCCAGATACAGATGTCTTCATTCTATAAAGAGCGAACCGTGGTCACTCATAAAAAGTAGGAGTAGTCGCACATTTTATAGTTAAATAAGAACGATTTTAAATCAAAAGTAGGTGTAATATTTCGCTTATGTATTACTCTGCATTTTTATTTGCTCTAAAATAAGCA # Right flank : TTGTTGTCGTCTGTGATTAAAAAGGATTACCTGTGATGATGAGCGGACGTCGTCCTGATCTGATATGATTTTTCATAATATCTGTCCTGTGCCATATCGGGTGATTAAACAGTTTGATAGTAAGTATAACTCTGATTGTTCTGTACTTGTTGATTCTTTCTTGTCTAGAATCCACGCTTTATCTCATTGTAGATTGTCTGAGGAGCTCTGCCCAGTTTTCTGGTGATTTGTCTGTTAGAATAGTGCTCATTAATCAGGGTCTGAATAATGATTCGTTCATCCCTGGAAAGATGTTTGCCCTTGAGTAATATCGTGGTACCATTGATATGCGTCATGCGAATTCATTCCTTATTGTTGGTATGAGAGCTTCAATATTAAAATGACTTCGTCATGGCATTTTTTCGTATCATTGTGTAGGAAGGGTGATGAATTTAATTCATGCCCTTTCTACAAATCATTCAAGCGATAGCGCGGAAAGATAGAAAGCGAATTTATTTTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //