Array 1 16272-17045 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000005.1 Nostoc sp. FACHB-857 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 16272 36 100.0 38 .................................... GATGCTTCAGTAACAACTTCAGCACCGTTGATTGTAAC 16346 36 100.0 36 .................................... CACTAAAATTCTTAACTAAAGGGTCATGACTATTAA 16418 36 100.0 36 .................................... ACGCTACAGCTAATAGATTCTCTGATTCAGATTCTT 16490 36 100.0 43 .................................... ATTAACCCTCTTGGGTGAGCTTGACTTGTCCAGAGATAGGCTA 16569 36 100.0 39 .................................... AATTCATGAGTTGTCTCCTTAGCGATCGCTTTAATTACA 16644 36 100.0 36 .................................... CTAGCTTGTAAATATGCTTGTTGATAGTCTTCTTCT 16716 36 100.0 39 .................................... GTTGATTTCCAATACCTTGTCCAAGAGAGAAGATAAGTC 16791 36 100.0 39 .................................... TCAAACTTAATACTAAAAGTAGGTAAGGAGGGTGAATAA 16866 36 100.0 37 .................................... TCTAATTGTTTGGGATTCAGAACTAAGATATTCATGG 16939 36 100.0 35 .................................... TCGTCTTGTTCTTGGGTAGCATCTATCCAAAACCC 17010 36 75.0 0 ....T.C....CA.....T..G........TA...T | ========== ====== ====== ====== ==================================== =========================================== ================== 11 36 97.7 38 GTTACAGTTACTCTTACCCCGCAAGGGGATGGAAAC # Left flank : TAAGTTAACGGAGAAGGAACCGAAGCAAGCTGCTTCTCTCCAAGAAGGACAGATGGTGAATGTGAAAATTTTATCTGTTAAGGATGATGGGAGCGTTAAAAGTGTCAAGTTTGTAATTTAACTCAGTATTGATGTTTTAAGTTTTTGATAGGCAAGCCTTGACGAAAATGTGTATGTAAATTATGTTGTTTAAATTGCAAATTTTCTATTAAATCTTACGTGCTTTATTTAGGCTTGATAGAGTACAGAACCTTGAAAAGTAAATAAATATAGTAGTTGCAAGGGTAGGTTTCCATACTACTCTTGAACGGAAAATCTATTGTGCGGCCGATTCGCCAAATGGCTGAAACCCTATTTTTTCGTGGAATCGGCCGCTTGCTTATCCTGTAAGGCTTTCAGAGATTTTTTCTCCATATTTTTCTGACGGGAGAGCGATAAAATTGGTATCGGTCGTAAACCGCCTCTAGAATCCATAGGTACTAAGGGTTTCAAAGCGAGGG # Right flank : TAAGTTGGATTAAGCACTGAAGTGCTTACTACGAGATGGAAATTTCAGAAATACAGTAATTTTTGTAGAATGTGATGTGTTTACTGTTGTTCACACCCTTAGTGTTACTGCTCTGAAGGGTGATGCAAGTATTAAAAGTGGGAAATTTATTGATTAATAATGAATTCTTACCACTAACTTCTTCTTAAGCCTAATAGTATATAAAGTAAGGCTATCTTAGCCAGCAATCTTTCTAGGAACAAAACATGAATTCACAAATAACCACATACTTGGGTGAATCACCCCCTCTTCTAGAGTCAAGCTCAACTGAATCAACTTTTCAACCAACATACAGCAGGCAGTTTTTTATAAATAGGCAATTATCACACATGGCAATCGAAGTAGAGTACACAGAAGAGTTCGAGCAGTGGTACTTAACGCTTAATGAAGCAGAGCAAGACTCTATTGATTTTGTAGTAGAGTTGCTTGAAGAAAAAGGTGTGAATCTCCGCTCTCCCTAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGTTACTCTTACCCCGCAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 394455-393768 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000001.1 Nostoc sp. FACHB-857 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 394454 37 97.3 35 ..........................C.......... ATCTCTCGCCCTGCATTACCGTTTCTGTCTAACGC 394382 37 100.0 35 ..................................... AATTTGACCGAGAAAGAATTATTGATAGTTTGGGC 394310 37 100.0 36 ..................................... CTTTGCTCCTGCTGGAATTGGAAAATCCAGAGTAAA 394237 37 100.0 35 ..................................... CAGCAGCCGAGATTGGCGCATTGCCACAGCCAAAT 394165 37 100.0 34 ..................................... AGCCGCAGCACAGTGAGTAATATGTGCAATAAAC 394094 37 100.0 39 ..................................... ACGACACGCGCCTAATTCAAGACTACTTAGGGCACATTG 394018 37 100.0 36 ..................................... AATGGTGGTTATGCTGTTACCTCTCAGTGGTCTAAT 393945 37 100.0 34 ..................................... AATGAAACAGCTTGCGAATGCGTGATTTGTAGCA 393874 37 100.0 33 ..................................... ATTCCGCACTGAGCATATTCTCGATCGAGTGAC 393804 37 97.3 0 ...................T................. | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 99.5 35 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : CTGCACGCTTGGCGACTTAAATTACAGCATCCCATATCTGGAGAAATGATTGAAGTCACAGCAACTCCTCCTAGCCAATTTACCAAACTTTTGGAGATGCTAAAAAAACGAAGCGATCGCACTTAAGTACCCAAGATGTGACCGAAAACCTTATTCTTGTGTAGCGGTAATTCATATAGACGCCCAGCAGCCACTCTGCGAGAACGCTTTGGGCGAACCCGCAGGGTATTACCGTCACTTTCGTTATCTTTTGCCTAAGTCCTGTGCAAAAAAAGCGCGGATGGGTAGGTGTTGGCACGAGACTGAGTACAAAAATGGCTGTATTCTGGTATATGTAAGCATTTGAGAAGTACCCTATTTCTCAACCATCCGCGCACCTTTTCTAGACGGGCTTTCAATCATTTACATATAGCCAAATTACAAACCCTCGTGTTATGATTTTTCAATTCGCGCAACCGAACCTCGAAAACCAAATAGGACAAAGCTTTCAGACGCAAGCG # Right flank : GCAACATCCTCTAATCTGTACATCTAAACAAACGATTAGCGTGCATCAGACATGGGATAGAGTCTGCTTCACTAGTTAAACCTAAATGAAACTCCTACATAACCCAGGACTAATGCACGCTATCAAATAATCAAACAGATTTACTAGCTAGCGGTTGAGCAAAAATCGTTACTTGATTCCTGCTAGTTGGCGATAAGGTACATCCCTTTCGATATCGATGTTGAATGACGAAACTCTTTGTGGAGCATTGCCAGTTGCATTGATACTCTGTGCCAAAGCCAAGAAATTAGCTGGATCGCCAGCTTTGGGCTTTTGTTCTTGGGGGATGAACCGACGTACTTCTACCTGCCAAATAATTTGGGGGAAGCCCAGTTTAGCGCGGTAGTAATCGTCATATCGTGGAGATTTGATGTTGAAAGGCAACTCACCTTGAGCGCGAGATGGTAAGACTCGACGCCGCTGATAAGGCACTGTAGAGTATCCAAAATTGCTGAGGTACT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 42710-43112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000053.1 Nostoc sp. FACHB-857 contig53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 42710 37 91.9 36 .C..........AC....................... TTGGGAGAATTTCATCAAGTAATTGAGTTTGAAAAT 42783 37 94.6 39 ....T..............T................. TTGTAGGTGCAGAGTAGCTCGTACAGTAGGAAGTTTGCG 42859 37 100.0 38 ..................................... TCGTTATCCCCAGCACTAACTGTAATGATATTAGAATT 42934 37 97.3 34 .............T....................... ATGGCTGATGCTATGCGATCGCACTATCCAGAAC 43005 37 100.0 34 ..................................... AGAGTAAAAGCGGCGATCGTCAAGGCTGCAATCG 43076 37 94.6 0 .............T.....................G. | ========== ====== ====== ====== ===================================== ======================================= ================== 6 37 96.4 36 ATTGCAATTAACCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTGGTGGGGCTTTTATAGATGCTCAGGCAGTTAATGCACAAGAGATACATGGAAACATAACTAACTACACGTCTGACCAAAAGCAAAATCTTGCTGAAGCAGCAGCAGAAATTCAAAAACTTCTCAAACAATTAGAGGAAACCAACCCCACTGCTACTGAGGCTGAGAAAGTTGCTTACGTTAATGACGAAACTACACCTAGTTTCAAGCGCCGTGTTGTTGGCGCATTCCAGGCAGGGGGTGAAACAGCGATTGATGAATTTATTTTAGAAAATAAGTATCTTAAAGTTGCAAAAGCAGTTATTAAAGCTTGGCTACAACCAGGTAGTTAACTGAGTTGGTTGTTATCAACCTTGCTTCTCAACCATCCGCGCACCTTATGGGGTCTGCCTTTCAGGGATTCATATTTAGCCAAATTAGAAACTGTTGTGTTATGATTTACCCATCCGCGCAACCGAACCTCGAAAAACCAAATAAAGTAAAGCTTCCAGCCGCAAGCC # Right flank : CATCAATTTCTAGCTTTTCATCAACCCCCAGTTCTACACCACTTCTACCCACAGGCGACAACATCGCCAAACTCGCAGCCGCACCTAACACCTGCTCGTCTGACACTTCCAAATATCTCTGCAACTGCTCCAAATTCCGATGCCCTGATATCTCCTGAATCACTCTCAACGGTATGCCAGCATTACTCATCTGAGTTAATGCAGTCCTTCTAAAGCTGTGGGTACTCACGCCAATTATCCCGGCTTGTTTGCAAGCTTCTCTCAAAATCCTAGCGGCGCTTGTCTTCGCTGATATGCCCATCGCTACGACCAGGGAACAGATAATCATCGCCGGAGAGCGGGTAATACTCAGCCAACAATCGCCGCAAGTCTTCAATCACTGGTATTGAGCGTGTGTATGCTTCCCTTTAGTGTTCGCCTTCCTGATAATCAGCCGGGGTCTGACCTGCCTTTTGAGTGTGTAAATATCTTGGGTCAACAGAGTGTAGCATTCACGAATA # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 1 212848-211348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000008.1 Nostoc sp. FACHB-857 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 212847 37 100.0 35 ..................................... AACATCTACGCCATTTCTCAAAGAGGTGGCATCCA 212775 37 100.0 35 ..................................... AAAATTTTGATTTTATCTAGCGCTTTGAAGGTGAA 212703 37 100.0 34 ..................................... CGCGCGATCGATCGCCATATTCAGACGATGGTGC 212632 37 100.0 33 ..................................... ATCGAAGCGTTCATCGACAAAAGCAGCAATACA 212562 37 100.0 42 ..................................... AGAAAAGCAACCACAAGGTTGGACTCAACTGGAGGATTCAGG 212483 37 100.0 37 ..................................... GAACGATATAGGACAGACGTTGCTAAGTGCAATCGAG 212409 37 100.0 35 ..................................... TTGCGTTCCCCAGCAAGCCACCCCCACAGCAAAGG 212337 37 100.0 32 ..................................... GTATCTTACGTTGAGGACATTCCCATATCCTA 212268 37 100.0 34 ..................................... ATTTTTAGCGCGGGCCATAGCTTTAAACTCCTAA 212197 37 100.0 37 ..................................... TTAGAATTCCCGTTGAACCGTGCTAACCAGTACAAAA 212123 37 100.0 34 ..................................... TTAATTTGTAAATCACTTTCTAGTAAATCTTCTC 212052 37 100.0 36 ..................................... TTTACCTGCAAGCTGTGAGCAAACAGCTTTAACTTC 211979 37 100.0 37 ..................................... GTAAATTCAACGCCTAATTATGCTGAAGGGCGAGAAG 211905 37 100.0 39 ..................................... CTCCATTTTGAATTGTTTGTAAAACGCCACGTTGCTGCG 211829 37 100.0 40 ..................................... CTGCCAACGCACAGATAATGACTGCGGCTCCCGAATTGTT 211752 37 100.0 36 ..................................... AGTTTGAAATTCAATCACCTGATGGAATTGCCCTAA 211679 37 100.0 36 ..................................... GCGGTGGTATAGCATCAGGAGGATTTTGTCAACCAG 211606 37 100.0 40 ..................................... AACCTCAATACTGATAGTATTCCTGAGGTAAATGGAATAT 211529 37 100.0 34 ..................................... CAAATCTCTCATGATTGCCGCCCCGACCGCTGGA 211458 37 100.0 37 ..................................... ACTTTAGTACTTTCTAGGGTAACACCGAAGAAAGTAA 211384 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 21 37 100.0 36 ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CTCAAACGCTTCCCTAGGGTCGATTCAGACTTTTCGGGAGAATTAGCTGGTGAACCCGTACTCATAATAGTATTATTACAACTTATTAAGTAGTCTCTTTCACTCTAGCAATTTACACGAGTCGGGAGTAGTAAATTACTAAGATCAAACTACCCCATCAGAAATCCTGCATTTTTTACATTTCGCCTCTGTGGCGGGCAAAATCCTTGTTATCTAATAATCAAACTGCATATTTTGTCAACAGCGCCACTAATCAAACTAGTTTTTACCAAATGCGCGGATGGGTAGGTGTTGGCCAGAGGATGGTTACAAAAATGCCTGTATTGCCTTATATGTAAGCACTTGACGATTCGAGTACCAGTAAACCTACCGCGCACCTTATCTAGACTGGCTTTCAGCGATTTACATCTAGCCAAATTACAAACCGTCGTGTTATGATTCTTGCATTCGCGCAACCGAACCTTGAAAACCAAATAATACAAAGCTTTCAAATGCCAGCC # Right flank : TAAGACTAACTTACAACATTTCATTATTCATAGCGAATTCTCTGCGTCCCTTTGCGCTTACCACTGCGCTCCTTTGCGTTTAAATTTCAACCGTCAATTCGCCACGATTTTACGCAAAGCTGTACTTAGGTATCTCAGCCATTTAGCTTTCATTGCAATTAACCAGCCTATCCCCGACTTATCAAACAAGTCGGGGATAGCACTTAACTTACAAAATCACTCCAGTTTCTTTCAAATAAACTCGTGTAAATGGTTCATCTTGCCCCAAAGTGTAGTCCTCAATTAACCCTTTGCGACGAATAGAAATGTCGTTGCCTTTTCTAATCACCACAGTAGAACCGTCAAAAACATCCCGCGCCAATATCATCTCAGTTTCGGTGGGATTATCCAAAACTACGAGATTACTACGTTGGTAAAACATACCCTCTTGCTCTAATATGTCTTCCCCATACTCAGCAATCAACACATCAAGTTTGGGATGACGCAGCAAAGTTTGAACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 6380-4875 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000112.1 Nostoc sp. FACHB-857 contig112, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6379 37 100.0 35 ..................................... ATCCCAATCTTCTAGAGAAGAACAAGCAACCATTG 6307 37 100.0 35 ..................................... ATTATTCCACCATTCATATAATTCATGACAGTTAT 6235 37 100.0 37 ..................................... GAGATTTATTGAAATTCAATGGCAATCGTATTCCAGA 6161 37 100.0 41 ..................................... ATGTTACATCAAGGTCAAGTAACATTTCATCTTCTGTAGGA 6083 37 100.0 32 ..................................... TTAAATTATGTCTAACCACCACGATAATCCAC 6014 37 100.0 37 ..................................... AAGCTGATGAGCGGCTAATTATTCTAAAAGCGATTAA 5940 37 100.0 37 ..................................... TTACATAGCAAAAGCCAAGCTCCTCCCTGAACTAGAA 5866 37 100.0 36 ..................................... AACGACGACGCCTCTGCAACATTATCAATTGCTGCA 5793 37 100.0 35 ..................................... TCTTGAGGCTAGGAGCAAGCGAGAAGGGCGTAAAA 5721 37 100.0 37 ..................................... GGTTACAGCGCTGGGTTGTTGTACTGGTTGTTGCTGA 5647 37 100.0 35 ..................................... GCTACAGTCTCTTGGTATCGTTTCAGGTCAGCTAG 5575 37 100.0 38 ..................................... ATCTCAATATAATCAATGGCAATTTAAATGCCAATGGA 5500 37 100.0 35 ..................................... ATTACTGAGGTTTTCAAAAGCTTAGAGAAAACACA 5428 37 100.0 36 ..................................... AAGCTCTGGGATTGGGAAATAAATTAGTAGAAAATC 5355 37 100.0 36 ..................................... AGTAAAAACTTGACGACGTTCTACAACGATTCGCCA 5282 37 100.0 36 ..................................... GAGCAAGTTCTCCTTATGTTTATTTAGGAGCAACAA 5209 37 100.0 35 ..................................... ATTCAATGAAACTTTAGCTACGCTCTACAACCTAA 5137 37 100.0 39 ..................................... CTGGGATTTTTGCACAAAACTCGCACCACATCACAATTC 5061 37 100.0 39 ..................................... TATAATTTATTATTGCGTTCGTAATTACCTTTTCCTTGT 4985 37 100.0 37 ..................................... ATTTTCAATGCAATTCGATTGCACAAATTACCGCGAA 4911 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 21 37 100.0 36 GTTTCCAAACTCAATTACCCCGCGAGGGGACTGAAAC # Left flank : TGGGATGGAGAACTGACAGTTGGGCTGAAGCATCTGAAGTCGTACAATTATTTGCCTGCTGAGTGTGAGCAGGTGCAGGAGATCTGCGATCGCATCAGCGGAGTATATTCTGATTCTCTGGAGGAGACAGTCAAAAGTCTGTTGCACTCGTTGGGGAAGCTGAACCGTCCTTATCTTACGGCAGTGGAAGAGAAGCTGTTAAGTTTGATAGAGAAAGAATACGAAATTACCGATTAAACTCCACAAATCACTCGACAATAGCAAATACTCATAATATCATTGTGTAATCAACTTGATGTTTGTCAAACCGAAGCGGGGTCAAAAACCCTGGGAGGTTTGCCAAAATCACCAGAACCTTGACAAATAAATAATTCTAGCGTTTCAATAATGGAAGCAGTTGCAAATTAGTCGCAATAACAACGGCTGAAATCGACCTATTTTTGAGGTTCGTCAAATTGCTTAAGAGGAAGCTTGCTCTGTAACAGTTTCAGCACCGGGCG # Right flank : ATTGACGAAACAATGATTCAAGGGGCGACAATCGCCTCTAAACCCAGCCAGATAAAAGTTTTGGAGGCACAGACCTTTTGAAAAAATTGGGTGCTTATTGAGAATGAACTGGATGAGGGTAGTAGGCTTTTCTGTGGGGAGCGGTTTTGTGGTAAAAAAGAACGGTCTCGTAATTTGACCAAGACCGTCGTCATAATGCTGGCATCATTCTACCAAAACTTCTTAGGAAAATACCTAAAGAAAGCACAGTTAATCACCCTGAAGATGTTGGTGTGGTTGTTACAAAATCAGAAACAGGTGAAGATAGAAACGCTGGCAGCAACCCTACCTTTACCTATACAGCAAAACAGTCGTAGACGGCATATTCAAAGGTTTTTAACACTGAATGCGAAGAAGTGTAGTGTTGTTGTGGTTCCCTATCATTGAAGCAATAATTACCCAATATTTTAAACTGGGTTCACAATTAACTATAGCGATGGATAGAACACAGTGGAAAGAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAACTCAATTACCCCGCGAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 10633-9652 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000016.1 Nostoc sp. FACHB-857 contig16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 10632 37 100.0 40 ..................................... ATATTCAAGCTCAATTCCGAATTCTGTGCCTGCTGGCAAT 10555 37 100.0 33 ..................................... ATATTAGCAAGTATTTGAATCAACGGCTCAGAC 10485 37 100.0 35 ..................................... AATACTATTTGGGATGATGTAGCAGGCTACGCGGG 10413 37 100.0 37 ..................................... CAATCTTGCGAAAAACGTCTTTCACGGAAAAAATTAG 10339 37 100.0 34 ..................................... CTCTTTCAATTCCATCAGGCTCACTTTTACTGAG 10268 37 100.0 34 ..................................... TGCGATAATAATTTTAATGATGACTTTCCTCCAC 10197 37 100.0 38 ..................................... GCATCTACTCTGGAGCATGAACAAGGATATCAGTCCGA 10122 37 100.0 38 ..................................... AAAAAGTTCATCCCCATCGGCAGGGTCAGTGTTGCCAT 10047 37 100.0 33 ..................................... CGGATAAATCATCTTCTGAGATATCGCCATTGA 9977 37 100.0 35 ..................................... TTATTGGGCGATGGCTTCAGTAATTGCAGCGATCG 9905 37 100.0 36 ..................................... GAGCGAAGGTTTTTAAGCGATCGGCAAAAGTAGTCC 9832 37 100.0 36 ..................................... ATAGATATCCCTGCTGGTACTGTGAAATCCTTAAAG 9759 37 100.0 34 ..................................... CTGAAGCGGAGCCTACCCCAAAAGAGCCTCCGCA 9688 37 94.6 0 ................................A...G | ========== ====== ====== ====== ===================================== ======================================== ================== 14 37 99.6 36 GTTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Left flank : AATGAATGTTGTTGTATCTTATGATATTTCAGAAGATAAACGTCGCACTAAAATTCATAAAGTTCTCAAGTCCTATGGACAATGGGTACAGTACAGTGTATTTGAATGCCATCTGACCGATACTCAGTATGCAAAATTGCGATCGCGCTTGAACAAGTTAATCAAGCCTGAAACAGATAGTATCCTATTTTACTTTTTATGTGCCTGCTGTCTAAGTAAAGTAGAACGTATTGGTGGGGAAAAAATTCGTGATGACTCTATTTTCTTTGCTGAATGCGCGGATGGGTAGGTGTTCAAAACCAAATTGCGGGAAGTAACCTTGAAACCCTCCTGCTGCAATAGTTTTGGAGAAAATAGCTAAGAAAGTACCCGCGCACCTTACACAGACTACGTTCTAGCTATTTTCCTAAAATTCAATGTCAATTCTACATGCTATGATTATCTCGTTCGCGCTACCGAACCTTGAAAACCCAATACAAACTGTATTTCAGGCTACCGCT # Right flank : TTATTCCACAATCAAATAAAAATCATCACATTCAGCAATGAAACACCAATATCCAGCATCCAAAATCCGAAGCTGACTATGGTGTTAGGAACTTTTTTTTTAAAGAGTTACCTCCTTTAACATCCAGCACTTGTGCTAATTCAGTTGGATTCAATGACTTAACGAGACTCAAACCAAGAGACTTACTAGAAATGCTTTGAGTGTAGCTAGCATTGAGATAACGAACGTATTGTGGCTTTCCTGCAACATAAGTTTGGAAGAAAGGCAAACTTAAAACATTCATGTAACGACGCGCTTGGGAAGCATCGCCAATCATTTCAGCAGGTAATGATAATTGTTGATTTGTCGGATTAGCGTTACCAATGGTGGAAAAGTGAGTGGCACCTGCAAGCATGACAAGATACTTTTGTGGATTTGCCAGCCACGAGAAAGGTAGAATTTGCTCGTATAAAGCCGGTGCAACAGTGTCATCGCTACTGCTGACAATCATCACTGGAGTT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCATTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 55577-56904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000015.1 Nostoc sp. FACHB-857 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 55577 37 100.0 32 ..................................... ATTGTAAATTGCTGACTAACCGCGGGAACGAC 55646 37 100.0 42 ..................................... CCACTGCCAAGTTTCAGCGCTCCCGCTTTTGGCAAATAGCGT 55725 37 100.0 35 ..................................... TGGCTCACCATCATTACCTGTGTAGACAAAACCAA 55797 37 100.0 34 ..................................... CACAGGGTGATAATTGCGCTCGATATCGTGTTAA 55868 37 100.0 34 ..................................... TGACACAGACTGTATACAACGGTGTAATATCAGG 55939 37 100.0 40 ..................................... GTATGCGGCAGGATTGCCGTAATCCACACCTCCATCCGAT 56016 37 100.0 32 ..................................... GGCGTGAGCCTTGGCGCTGCACAGGGTTGGCT 56085 37 100.0 31 ..................................... CGCTTGCGTAAAGTTTCTGACATCGGATATA 56153 37 100.0 34 ..................................... AGCGGTGATTCATTGATTCCGCCTGTCGCTTGAT 56224 37 100.0 34 ..................................... GGGTCACTAAGCCGGAGCTTCTCACTACCAGGCA 56295 37 100.0 34 ..................................... ATTGATCGGAAAGTAACGACTTTCTACAGTTTTC 56366 37 100.0 42 ..................................... AGTCCTTGCACCGATACTTTACCAGAGTGAGTAAATGCCCAT 56445 37 100.0 32 ..................................... ATTTCTAAACCAGTTGGGGTATTAGAAAATAA 56514 37 100.0 34 ..................................... ATTCTTCGCGATCGCCATAACTATTGAGTGTGAA 56585 37 100.0 34 ..................................... GAGTCGGTGAAGACACTTCCGAAATTACATAAAA 56656 37 100.0 35 ..................................... GGTTGGCGTTTCCCCTAGCAGGTCTTTCTATTGCT 56728 37 100.0 33 ..................................... ATCGTCTCTCTTTACTCGTGCCATAATATCTCC 56798 37 100.0 33 ..................................... GGGGAATATATACGACGATCGGCAGAGTATACG 56868 37 89.2 0 .................................TTTT | ========== ====== ====== ====== ===================================== ========================================== ================== 19 37 99.4 35 GTTGAAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : GGCAACAGGCAAGAAGAACGGGGCGATGCAACAAAGGTGCAAGGCGATGCAACAAAGGTGCAAGGCGATGCAACAAAGGTGCAGGGCAATGCAACAAAGGTGCAAGGCGATGCAACAAAGGTGCAAGGCAATGCAACAAAGGTGCAAGGCGATGCAACAAAGGTGCAGGTCAAGAGACTTGTGTGTACACCGTAGCCTTGCTAAGAGGTTGTTTGAAAAGTGGTTGGTTATGATTTTAGGCACTTTATCGATCCCCCCTAAGCTTCTTACCGAATGCGCGGATGGGTAGGTGTCCAAAACAAAATATGGGGGAGAAGGTTTCAAATTCGCTTAGTATAAGAGTTTTGGCGCAAATAGTTGCTCAGGTATCCGCGCCCTTTACACAGGCTAGGTTTTAGCTATTTTTTTACTACTCAATCTCAATTCTTCATGATATGATTGCCTCATCCGCGCATCAGAACCTTGAAAATCAAATAAAAACAGCGTTTCGGACTTCTACG # Right flank : TGGTAAACAACTAAGTAACGCAAGCTCTGAACATTTTCACGCCTCGCCTTACTGCGATCTCTCTATCGGCCAATACCCTTATTTCTCAATCAAAGCTATACTACCATCGTAAATTGCCAAGATTTTGAGGTAGCAGCAGATGATTGATCTCTACACCTTTACCACGCCCAATGGACGCAAAGTTTCCGTGATGCTTGAAGAGGTCGAATTGCCTTATAATGTCCACAAAATTGACATTACTACTCAACAGCAATTTACACCTGAATATATTGCCATCAATCCCAATAGTAAAATTCCCGCCATTGTTGACCAAGAGACTGGGATTACAGTTTTTGAATCGGGCGCAATTCTAATTTACTTAGCCGAAAAAACAGGTTGTCTGTTACCTACTGACCAAAAAAGCCGTTTTCAAGTTCTAGAGTGGCTGATGTTCCAAATGGCAGGAGTCGGGCCAATGTTTGGACAACTTAACCACTTTAAACGCTTTGCACCCGAAAAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 12350-10916 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000021.1 Nostoc sp. FACHB-857 contig21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 12349 37 100.0 34 ..................................... AGAAAAAACCTGGGCAGTGAGCGGAGTTGTTGGT 12278 37 100.0 36 ..................................... GGGACGATTGATTGCAGGACAACCAGTACAACAAGC 12205 37 100.0 33 ..................................... TTGTCTTTCCTTACCCTAACTTTGCCGACTTTG 12135 37 100.0 36 ..................................... TTTCGCAAGATTGGACCGATTGATAAACCAAAGGGA 12062 37 100.0 37 ..................................... ATTCTTCAAGGCGTCGATAATAGCGTATACTTCGGAT 11988 37 100.0 33 ..................................... GTCGAGTTCATCGCGTAAAGATGCACCCGTGTG 11918 37 100.0 35 ..................................... GATCGCACTTCGCGTCAGTCCCGTGTCGGCAGGGT 11846 37 100.0 37 ..................................... GCTCCAAGCAGAAGCAGTACCTACACCATCAAGAGTG 11772 37 100.0 53 ..................................... TGGTAAAAAACCTGTGGCGATCGCCGCCTTGATTTCCTCAACGGTAAAATCAG 11682 37 100.0 37 ..................................... TAACCATGCCAGCAGATGGCAATGTAGTAGATCCTGA 11608 37 100.0 36 ..................................... CTGATAAAATTTGGCAAGGTGAAGTGATAGGTATGA 11535 37 100.0 35 ..................................... AAACACTCCTTCCACAGCTTCCCATGAACCTCTTT 11463 37 100.0 35 ..................................... GACGGTAGCCCGCGAGAATACATCAATTTTCGGGC 11391 37 100.0 36 ..................................... AATGATGCCAAGCTTTTTGAAGTGGTGATGGATGGG 11318 37 100.0 34 ..................................... CATAAATATCGCCTTCTTGGTAAAAATTCACCTG 11247 37 100.0 33 ..................................... TGGGATATTAAAATCAGAGGGGTATCTAATTGT 11177 37 100.0 36 ..................................... GCCAAATCTTGCATTGCTTCAAAGAACCATGTATCA 11104 37 100.0 36 ..................................... CAGCCGCTTGGAGAGAAGCTTATGCCCAGTTCAAAG 11031 37 100.0 41 ..................................... ACTCAAATGCTAGTGACTGGCACTGGCTACCTGCGACTCTA 10953 37 91.9 0 ..........................AA.....C... | T [10928] ========== ====== ====== ====== ===================================== ===================================================== ================== 20 37 99.6 37 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : GTTTTCATTTTGCTCAAGTTGCACGTATCAGACTCACAAGTTCTGAGATTTTAGCCAGTTTACGTCATCCAACAGGCTTTGTTCGAGAAGCAGCGATCGCATACTTGAATATGGTTTCACAGCGCGTCCTCTTCCAAATCCTACCCCAACTGCAAAACGATCCACACCCTCTAGTAGCCGCCCAAGTTAAGGAATTGCTCGAAAAATACCAATTCAAAAATTACAAGAAGTAGTGCCAAGTCTACATCCAATCAGACTAATCTCTTTGCTGAGTGCGCGGATGGGTAGGTGTTTATGAACAGCTAACTACCAAAATGGCTAAATTGCCCTCTATGTAAGAATTTGACGCCAATAGTATGTCTCAACCATCCGCGCACCTTATCCAGCCTAGCTTTCAGCGATTTGCATCTAGTAAAATTACAAATTTTTGTGTTATGATTACCCCATCCGCGCAACAGAACCTTGAAAACTAAATATCACAGCGCTTTTAGACGCCCGCT # Right flank : GATCGCACTAAGCAACTGGCGATCGCCATCCAGAGCAACTGGATTTGCTCTAGGGGAATCAATAAGTGCAAAGATACAGCCAACCACTTTTCAAACAACCTCTTAGACCTTCATTCCTTGTTAGCCTAGAGACTAAAGTACAAACTCCAAGAGCATTAGGAATATTCATGTACGTATTAATTGGTGGAGCAGGTTTAGTGGGGCTAAGTTTAGCGCAGAAGCTGGTAGAGTTGGGGCATACTGTTGCGGTTATCGATATTGACCCTACCGCTTGTCGTTATGCCCGCGAACAAGTTGGGGCAATGGCTTTTGAAGGAAGTGCTGTGAGTACAGAAGTATTGTTAGAAGCTGGGATTCGCAAAGCCAGCTCTTTGGCTGCTGTGCTACGCAGTGATGCCTTAAACTTGGCAATGGTAACTCTTGCTAAACATTATGGCGTTCCTCATATTTTAAGTCGGATGCGTCACCCCGATTTTGCTGAACCCCTACGTCTGGCGGGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 18184-19254 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000023.1 Nostoc sp. FACHB-857 contig23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================= ================== 18184 37 100.0 55 ..................................... CCGAAAATAAAGCTGTTGACACGTGAGCAAAGCTACAAACATCAGTATTACAGGC 18276 37 94.6 36 .G.A................................. CCGAAAATAAAGCTGTTGACACAAACGGTAGATTTA 18349 37 100.0 34 ..................................... TACCTGCGCCCCAACACGTAATTCCCACTCGCGC 18420 37 100.0 34 ..................................... GAGATTCGCTCAATTCGTAACATTCCCGCTGAGA 18491 37 100.0 33 ..................................... TGACTAGTGATAGGGCTGGTGATAATGGTATCA 18561 37 100.0 35 ..................................... CTCTTCGGCTAACTCTTCCTCTATTTCCCAATCAG 18633 37 100.0 39 ..................................... GTCTCTACTTAGTTCCCCTTTATTTACCCTACGGTTTAC 18709 37 100.0 36 ..................................... AACTGCCCCACAAGCAAAGCTAATGCTGATGGGAAT 18782 37 100.0 34 ..................................... TACTTGCAAGGTCTGTGACTCCGAAAGGGCTAAG 18853 37 100.0 35 ..................................... AGTGGCGACTTTAGCTCCCGCCTTGATTAATTCAG 18925 37 100.0 35 ..................................... ACAGGGAAAAGCAACAAAATCTTGGTTACGTTGAT 18997 37 100.0 34 ..................................... AAAAAATAAATGTAGGCAAGGCGCTGAAGCTAGG 19068 37 100.0 41 ..................................... TCGGCGTGCTTGCCCTCTAAAATCACCACCTTATCTCCCAC 19146 37 100.0 35 ..................................... AGCTGAGAATAAGAATCAAACTTTTGTATTTAAAT 19218 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================================= ================== 15 37 99.5 37 ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Left flank : TACCTTGGACAGCAACTCAGGCACTTAATAACAGTACATTACCTTATGTTGTCCAGTTAGCGAATTTGGGAATTAAGGCATTGGAAGTTAACCCAGCCTTAGCTAAAGGTGTGAATGTGCAGAATCATAAATTAGTGCATCATGCTGTGCAAGAGGTTTTTCCTGATTTGGTAAGTTAGACCTTGCACAGGCGAGGGTTAGAAGCTGTGCAAGCGGTAGGCGATCGCCTATCCTAATGGTGGTAATCTTCATCAATTAGACTAATTTCGTTACCAAATGCGCGGATGGGCAGCTGTAGAAAATCAAACGAAGCAAAAAATGGCTGCATCTTAATGTGTACAAGGTTTTGAGGACTATACGACTTGTGAACCATCCGCGCACCTTATGGAGACTGAGTTTCAGGGATTTGCATCTGGTCTTATTACTATCTCCTGTGTTATGATTTTCTCATTCGCGCTACTGCACCTTGAAAACCAAATACAGCAAGCCTTTCAGATGCC # Right flank : TACAATAGTATTCAAAGAATGCAACCAACGACTTAACATCCTTTCAGACATCTTGTTTTGATACCAAGTTTGACATCCCGTCTTTTGACACATACAGCAGTTTGCAACTAAATGAGGTACAGAATCAAGGATTCAGAAATCAAATTATTCTTCTCCCTCCTGCCTCCTGCCTTCTGCCTCATGCCTCAAAACCAGTGACTTTGTACCTCATACAAAACAAAACTGCTGTATCACTAGTTCACTCAGAATGTAAAAAAGTTTCCCTACCTATAGAGAGATGTTTTTATTGAATAAAGTTGACTCAAAAAATACAGATAAATAGTGTCGATCGCTCACCATGAAAATCAAGCTTTTGAAAATAGCGTAGGCGTTCCCGTAGCGTTCTGTAGAAAAGCCCGTCGCAGACATTGGCACTACAGCAACGCAAAAATAAAATTCAAAAATACATATAATGCAAACTTTTGAACCATTCCCAATGGTAGATTTATTTCCACTATGAT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 65114-63324 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000029.1 Nostoc sp. FACHB-857 contig29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 65113 37 100.0 39 ..................................... ACCTTCCCAATATTTAAATTATTCTGTTTATTCACCCAA 65037 37 100.0 37 ..................................... TGGCGATGGATCTGGATGGGAGGAATATGGGTGGCAG 64963 37 100.0 36 ..................................... ACTTAGATAAGTTAACTAAATAATCATATACTTTAT 64890 37 100.0 35 ..................................... CAATACTGCGGCGAACTGCTGATATAAGGCAGCAA 64818 37 100.0 36 ..................................... AAGAATAAAAGTTGTTACCAAGTTTAGAAAGTGCGA 64745 37 100.0 34 ..................................... CGATACCTAATGGAGAAAGAAAAACTAACTTGAC 64674 37 100.0 42 ..................................... ATGTTTTCACAAGCTGACTCAATGCCCAATTCGGAGACAAAG 64595 37 100.0 33 ..................................... TCCAGTTAGTAATATCTTCACGGGAGATTATGA 64525 37 100.0 34 ..................................... TAAAGTCATCACTTACCCCCGCAGCACGGGCACG 64454 37 100.0 37 ..................................... ATGAAAGATCCACTAGATTTCATAGAGTTGACCCTGA 64380 37 100.0 36 ..................................... TTGTTGAAGATGCAGTTACACAAGCAACTATTACAA 64307 37 100.0 34 ..................................... TAGAAAGTTCCACATCTCTAAATGTTTTTGTTTG 64236 37 100.0 37 ..................................... CTGCGAATCCAAGCGACAAGGCAGAAAGCAATCAGTC 64162 37 100.0 35 ..................................... AAGAAAAAATTAACCAATTGGCGGGATTAAAACAA 64090 37 100.0 34 ..................................... TACGTAAATTCAACTCTTCCCTCTCCATTAAGTG 64019 37 100.0 42 ..................................... CTTTTTCTGCTGGTACAAATTTTATTACTCAGACTACTACAT 63940 37 100.0 35 ..................................... TTATCGGAAGAGGGGTCTTCCAACCACTTGTATAA 63868 37 100.0 35 ..................................... TTTCTTGGTTACTTCGTATTGGCGTTGATTTTGAA 63796 37 100.0 35 ..................................... ATTGACCCAATCCTGACGAGAGAAATCCAACTTGG 63724 37 100.0 35 ..................................... GGTTTAAACATGACTAAAACAGTGGAACTACCGAA 63652 37 100.0 36 ..................................... CGCTGCGCTTTGATTTAGCTCGCGTCCCATCTGGGA 63579 37 100.0 35 ..................................... ATGACACCGCTGTTGTAGTTCCTGCTACTACAACA 63507 37 100.0 35 ..................................... CTTACATCAGCTTTTTTTATTCAGATAATAGCAAA 63435 37 100.0 38 ..................................... GATTACGGCTTCCTTATTATTGAAACTAACGACCGCAA 63360 37 86.5 0 ................................TCTGT | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.5 36 GTTTCACATTAATGATTTCTGCTTGCGGGATTGAAAC # Left flank : AAAGGCTCAAATATAAACGTATTAAAAGATTTAAACACAGAGACAAAAGCAAAAAAAATGTTGACAAATTTAATCAAAAGATGTAGAGTGAATTTATACAGTACCGCAGTTTGATGGCGGAAAAATTTCAGTTTTAATACTGATAAAGATGACTCGAAGGGAAACCAAAGAGTAAGGTTAAGAGGCGACTCTTACCATAGACAAGCCGGAATTATGGCTTGCAGTTCTTCAATTTAGAAATCATTAATTCTGTTTTTGCAGTAAGTCTGTACCTTGAAAATTGAAAATTTTTGAGTATCTTCAAAAATTTTGGCAAGAGAAAGCACGGGCAAAAACCCCCTAGTTCCCGCCAAAAATCTATAACCCTTGTGGTTCAAGGAATATAGCTTATAAAGCTCGACTGGTTTATCGATTACTCCGTGGCTGAAATGAACTTTTCTACCTCCCCTGCCAAAAATAGTTATACAAAGCTAGATTGTTAAGGGTTTAAGCTTTTTGGG # Right flank : TAATGGTTGTTGTGGTTCTGTAATTTTACTTTCAATAAATTCTAAGTCTAGTATGATTTCTGTTCCATCTGGAATATTATGAAGTTGTTCTAATATTTCAATATTTTGACCACGTTTGATACCTCTAACCTTCATATTTAATTATCTTTTATAATTATTAGTTTACTGATGATTGATAATGGTTGGTAAAAAAAAAGCCACAATGTAGATTTTTTAAGATTCAATAATTAATTCAGAAACTTTATCCAGTAACTTCTGCTGACAAGCATCAAACCATTCTTGAATCAATTTATCTTTACCATTTGGAACTTCATAAAACCTGAAAGACATACCACTACTTCTAGATATTCTGACAACTCCTGACAGGTCTAATGTTTCCTGATTGATTTTAGCGGATATTTCTAATGGTATAGATACAGATTCGAGTTCTTTTTTAGATGGGAGTTCTGATGGAATTCCTCTGCTTTCTGCTGTTTTTTTCGCCAGTTCTAAATCTTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACATTAATGATTTCTGCTTGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 79603-82470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTK010000029.1 Nostoc sp. FACHB-857 contig29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 79603 37 100.0 38 ..................................... ATTACGAGCATTCTTTTCTCTTTCTAAGAGATTTATAG 79678 37 100.0 36 ..................................... TATCTTTATGTCCAAACTCTTCAGTCAGATCGTTGA 79751 37 100.0 36 ..................................... ATTTCCATGCTTGCTATTTAGAAAAGGCTTCCTTGT 79824 37 100.0 36 ..................................... TGGCATCGCGGACAACATCGCCGCCAAATAAGACTA 79897 37 100.0 39 ..................................... CATATAGCTTATTAGTTCAATCTGTGCCTTTATATAGAA 79973 37 100.0 35 ..................................... ACACAGTAGACTTATTCAAGTATTTAGCTAATAAC 80045 37 100.0 37 ..................................... CAATACTGCGGCGAACTGCTGATATAAGGCAGCAAAA 80119 37 100.0 34 ..................................... CAGTCGGAAATATTGGGGCGATGCGGTTTGCTTG 80190 37 100.0 34 ..................................... TTCAGTTTGCGATCGCACTGAATCCATAATTTAA 80261 37 100.0 35 ..................................... ACTTGTGTTTCGATATTGATTAATACTCTAGTTAG 80333 37 100.0 35 ..................................... TTAGATTATCTTGATGTTAACGGCTTCAAGCCTGA 80405 37 100.0 37 ..................................... GGTAAATGGGGAGTTTTTAACTCCCCATTTTCTTAAG 80479 37 100.0 36 ..................................... TCGCTTTGGAAGTATATCAAAACCAATCTGGCTGTG 80552 37 100.0 33 ..................................... TTTTTATAAGCTCAGCTTTACTAAGTTCTAATA 80622 37 100.0 33 ..................................... TACTTTGACTAGCTTTTCTTCTCCTACTGTTAG 80692 37 100.0 34 ..................................... TTTCCGCGCCGGGGAACTTAGCCAAGTGGCGTGG 80763 37 100.0 34 ..................................... CTTTTATTTTAGCTTTAGGCGGAAACTGTGTTTG 80834 37 100.0 36 ..................................... GGGTAAATGCTACTGGTGCGATCGCCGCAGCATTGG 80907 37 100.0 34 ..................................... AAGAACAAAGGGTCATATTAAACGACGCTGTTCG 80978 37 100.0 33 ..................................... CTGGAAGCTTGATTGGCTTGTTCCTAGCTTTAA 81048 37 100.0 34 ..................................... TACCAATCCATCTGTGCAACTACTTAGGGGTCGG 81119 37 100.0 38 ..................................... AAACAAAGAGAAGCTTCAGCATTTATTAAATACTAAAT 81194 37 100.0 37 ..................................... AATGCAATGAAAATATCTATTTTTCTTACTCTCTTAT 81268 37 100.0 35 ..................................... TTGAGATAATTTAATATCACCTAATAGTTTTCTTA 81340 37 100.0 37 ..................................... CTTTGGAGTTCGTCAATGAAAGGGAAAGCAATACTTG 81414 37 100.0 37 ..................................... CACCAGCAGTAGGCTTAGTAGGTCTGTAGCAGACTAC 81488 37 100.0 37 ..................................... AAGAAGTTAAATCTATTGACGCTATAGAGCGCAAAGA 81562 37 100.0 36 ..................................... ATGGTTGAACATGAGTAAAATAATCAACCGTGTAAG 81635 37 100.0 33 ..................................... GTTGATTTGAGTACCAAAGCAAAAGAACTTCAC 81705 37 100.0 35 ..................................... TAGTAAGTTCGGTCTTGAAATACAAACAAAGGATT 81777 37 100.0 38 ..................................... ATCGCTTTTAGTACTGAATATTGAATGGCGATCGCCCG 81852 37 100.0 35 ..................................... TAATATCTACCAGAAATATAGCCAGGCACACTCAG 81924 37 100.0 36 ..................................... ATCCAGAATGAATACGTATTCATCCAACTCCCAACT 81997 37 100.0 36 ..................................... TATTGTTTTCCAGATTCTAGTTTCATCGCTTCTAGT 82070 37 100.0 37 ..................................... GGATCGACAAAATAAGAAATACACTTTGGCATCTCAG 82144 37 100.0 35 ..................................... ACTTGGTTTTATGTCGGATGACTGCCCCATTAATT 82216 37 100.0 34 ..................................... AAACCTAGCTAGTACAAATTTACTCTACTGAAAA 82287 37 100.0 36 ..................................... AAATCTCAGACGAATATCTCAAGCCCCGTGATATTG 82360 37 100.0 37 ..................................... CTGGAAATATGGCGACACTCAATATTGGAATTCCCAA 82434 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 40 37 100.0 36 CTTTCAAATAAATGAAACCCGTTCGCGGGATTGAAAC # Left flank : CTTTGTTCTACCTCATAATTTATGATTTGCCTGATAATAAAAAGGCAAACAAGCGACGAACAAAACTACATAAAATGCTTTCTGGCTATGGAACTTGGACGCAGTACAGTGTGTTTGAATGTTTTTTAAATACTGTGCAGTTTGCTAAATTGAAGGTGCAAGTTGAGAGCTTGATCAAGCCATCTGAAGATTCAGTACGTATTTATGTTTTAGATGCTGGAGCAGTACGTAAGACTATTACCTATGGTTCGGAGCAACCACGACAGCAAGAAACGATAATACTATGATGCTAATATGATACAAGCAAAATTTTGGCAGGGCAAAGTACGGGCAAAAACCCCCACCTCCCGCCAAATCGACAGAACCTTGACAATTTAATAGTTTCAGCAGTTCAAGTACGAACATAGAGCCTAGTTATAAATGCCGGAAATGGACTTTTAAAGTAGACCTGCCAAAAATGGTGTCGGGAATGGCTCTGTCATTAGCTTCTGGCTGGCTGG # Right flank : CTTTACAGACAACAATGGCTCCTAAATTCTTCACAAGCCTTCTAAACTGCGCTGGTTCATCAAAAATTACAGATACACGAATGCAGCGATCGCCTGGACAAAATTCACAATCAATCTTCTTGGGAAGCTAAAGCTTGCTCTTTCGCCACAGCCTCAGCTATAACTTGCCGGAGCCATTCAGAACGGTTGGGTTTGTTACGCACATAAGTATCTAACTCGTCTGGCAACAGTACCGATATAGGTTTCGCTCCAGATTTTACTCCTACTCCTTTTGACTGAAAGCGAGTAGCAATATCATTTCTTTCCATAGCAATGAGCCTTTTTATATAAGCTTATCCTAGCAAAGCCCGTATATATATGGCAATAAATTAGTTATTTTAATCATAAAATATCCAGATTCTGATAATAAACCCATATATATATGGGATAATAAAAGAGTAAGGAATAGGAACGGAGCGCCACAAAAACTCCCGGTAACGGAACCGGAACGCCCAACGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATAAATGAAACCCGTTCGCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA //