Array 1 43924-45219 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NSMT01000007.1 Pseudomonas aeruginosa strain MCF561 IPC1353_7.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	==============================	======================================	==================
     43924	    30	  90.0	    35	GT...G........................	GAGATCGAGTCGGACAAGGCCGAGCGCTGGGAAGT   	
     43989	    30	 100.0	    37	..............................	ACCAGTTGCCTAGCCGTCATCACGGGTTTGCTGATGT 	
     44056	    30	 100.0	    36	..............................	GAAATCTGGCGCGTCGAGTGGCAGCAAATCGTGCGT  	
     44122	    30	 100.0	    37	..............................	CAAATATTTGAGCCTGGACAGAATGTAAGTGGACAGT 	
     44189	    30	 100.0	    37	..............................	AGCCAGAACCTGGTGCGCTGCCGCGCCGTGAATATGT 	
     44256	    30	 100.0	    36	..............................	ACCAGAAGGGCGCCGCCATCGCTCAGGCGATCCAGT  	
     44322	    30	 100.0	    37	..............................	ACCGGTATCGCGCCGCGCTTCAACACCGTCAGCACGT 	
     44389	    30	 100.0	    35	..............................	AACGTCGCTGGGGCCACTGTCCAGTACCTGCCCGT   	
     44454	    30	 100.0	    37	..............................	GATGAGCCCAATGTGTAGGAGGGTGAATGCCGTACGT 	
     44521	    30	 100.0	    38	..............................	AGCACGGTCTGGTCCATGTACCAGTCGAAGCCGAGGGT	
     44589	    30	 100.0	    37	..............................	ATGGCTTTCTCCGGGCAAAAGAAAAGGCCCTATTGGT 	
     44656	    30	  96.7	    38	........A.....................	CATCAGATCAAGGCAGCACTGGTTGAGAAACCCCACGT	
     44724	    30	 100.0	    35	..............................	TGGAAGTCCCCGACTATCCGGAAGATGCCGAAGGT   	
     44789	    30	 100.0	    38	..............................	GGCGCGACGGTCGTCAGGATGAGCGACGGTGCTGGCGT	
     44857	    30	 100.0	    38	..............................	TTCTTGAGGGTGGAGAGGCGGGCTACTTTTGCCGGTGT	
     44925	    30	 100.0	    38	..............................	ACGGGTGCGCCAGTGGAAAGGGAAATCACATGGAAGGT	
     44993	    30	  96.7	    34	...........T..................	CATTGCTCCGAGAGCACGTTCGTGCCTGGCATGT    	
     45057	    30	  96.7	    38	.......T......................	AGCCCTGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT	
     45125	    30	  90.0	    35	...........T................CA	ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT   	
     45190	    30	  83.3	     0	.......TA.G............G.....G	|                                     	
==========	======	======	======	==============================	======================================	==================
        20	    30	  97.7	    37	CGCGCCCCGCACGGGCGCGTGGATTGAAAC	                                      	       

# Left flank :   GCCATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTATGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATATACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCG
# Right flank :  GATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGTCTTGGTGCAGCGGCCCTTGGCCGTTCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT

# Questionable array : NO	 Score: 9.15
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCCCCGCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.80,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [5-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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