Array 1 248079-252380 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCNH01000002.1 Spirosoma fluviale strain DSM 29961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 248079 37 100.0 35 ..................................... AATTATTGTCCCGCAAGTATAGCCATATTGTATGG 248151 37 97.3 35 C.................................... GGCATAAAGAGGGAGGGGTTCCAGTTGCCAAACAT 248223 37 97.3 36 T.................................... TTTCAGTCCGGAAGCGGGCAATCTGGACAACCTTAT 248296 37 97.3 37 T.................................... GCGGCATAATCCTAATTATATAAGCCGCTAAAAGAAA 248370 37 100.0 36 ..................................... ATTGCCTGTGCCAATACGTTCGGCTCCGGTGCTACC 248443 37 100.0 37 ..................................... TCCGAAAAAAACAATTCGATATTACCCAGCTAGAGCA 248517 37 100.0 37 ..................................... ATAAGCCGCTGTTCAATCTTATACTGGCTTATTACTT 248591 37 100.0 37 ..................................... TGTTTCCAGATGCCCTACTTCGTGAAGCAGCACAAAC 248665 37 100.0 37 ..................................... CTCGACTGTTGCTCTAGCTGGGTAATATCGAATTGTT 248739 37 100.0 38 ..................................... CAGATTCTTTTTCAGCTCATCCCCCAGCCCCTCCAGCT 248814 37 100.0 37 ..................................... CTACCCGCTGCTGACGTTCACGGTCGGCGAAAAATTC 248888 37 100.0 37 ..................................... AGAAAACCCGTCAGCACGTCGATTATGTGCGTCAGTT 248962 37 100.0 36 ..................................... TCGAGGAGTCAGACGTAGAGTTCGGGCCTGACATCG 249035 37 100.0 35 ..................................... GTGGTTGGGCAGCGTGGAACCTTGCTCGTCGTTTT 249107 37 100.0 37 ..................................... CGCGGATCACTAAGGGAGGTACACCACCGTACAAACT 249181 37 100.0 36 ..................................... TTAACAAACCATTCGCCTGTCGGCGGTAAACTACAC 249254 37 100.0 36 ..................................... TCCAGTCTTCGCGCTCTCCAATCTATCCCCAATGCA 249327 37 100.0 36 ..................................... TCCAGTCTTCGCGCTCTCCAATCTATCCCCAATGCA 249400 37 100.0 36 ..................................... TCCAGTCTTCGCGCTCTCCAATCTATCCCCAATGCA 249473 37 100.0 37 ..................................... AAAAATAAACCCCGCCCGATGGGGCATGGTGCAAGCC 249547 37 100.0 37 ..................................... TACAATTTATGCCCAGCGGTACCGGCAAACGTTTTGG 249621 37 100.0 37 ..................................... GGTAGTTACGGGCGACAGGATAGCCGCCCCAGTGGAA 249695 37 100.0 40 ..................................... AGGATTTCAGTCTCGCTGAGCTGAAGACGATTTTCAGCAA 249772 37 100.0 36 ..................................... CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC 249845 37 100.0 36 ..................................... TGATACTCGTCGCCGGTAATGTTGATCTGCGCGGCT 249918 37 100.0 36 ..................................... AATACATCGGCCGGGATAAGGTGACGCAAAGCCTGG 249991 37 100.0 36 ..................................... GGGATTATGGGTTGTGGGTGCATACGTTACGCTGCT 250064 37 100.0 36 ..................................... ACAATTCCTTATAATTATGGCAATCAATCCGAAAGT 250137 37 100.0 36 ..................................... GTTCCTTCAGCTTCTCAAATAGAGTCTTGATCATGA 250210 37 100.0 38 ..................................... TCATTCACAATTCCATAATGCCTATTTCCCCAAGTCAA 250285 37 100.0 36 ..................................... AATGGCAGAAGGCCGACGTTAGAGCGTCGGCCTTCT 250358 37 100.0 36 ..................................... GTCGCTGAATTTGGTGTAACTGAATGGATTGGTTGT 250431 37 100.0 38 ..................................... AGTGTACCAGCACCACCCACAATAATAGCTGCACCAGA 250506 37 100.0 36 ..................................... TCTGCTGGACTCTACCACGCTACAGGCGTAACCGAT 250579 37 100.0 36 ..................................... TACGAATCTTTCCAAAGGGACTTGGTGAGTATAGTC 250652 37 100.0 37 ..................................... ATAATCAACATTCCCCCAGGCACGACAAAAAGCACGA 250726 37 100.0 37 ..................................... GGTAGTTACGGGCGACAGGATAGCCGCCCCAGTGGAA 250800 37 100.0 40 ..................................... AGGATTTCAGTCTCGCTGAGCTGAAGACGATTTTCAGCAA 250877 37 100.0 36 ..................................... TGATACTCGTCGCCGGTAATGTTGATCTGCGCGGCT 250950 37 100.0 36 ..................................... AACCTATCAAGTGGAAAAATTATACTATCTGCCACC 251023 37 100.0 36 ..................................... TCGACTTGGCCCGAGCGGTACCGTGAATGGGAACAA 251096 37 100.0 36 ..................................... ATTAAAAGACTATGATTTCTACACTAAAAGAGTTGG 251169 37 100.0 36 ..................................... CATTGATTGCCTGTATATCAGCCGCCATTGGGTTGC 251242 37 100.0 37 ..................................... ACGGTACCGAGTTCAACGAAGGCGACCTGTTGACGAT 251316 37 100.0 36 ..................................... ACTGATATGTTCTGCGGATGCGGTGGTTCTTCTGAG 251389 37 100.0 40 ..................................... AAGGACTGCTCCAGTCAGCCTATGATGATAATGGCTACAT 251466 37 100.0 36 ..................................... GATACAGTAGGAAAGTCAACGATAGTTGACGCAACA 251539 37 100.0 36 ..................................... AGTCTTACCGGGCCTTTGTGGATAAATGGAATGCCT 251612 37 100.0 36 ..................................... CGAAAACTTCACCACTACCTACCCTGTTAATAATGG 251685 37 100.0 36 ..................................... AAGACCTAAAACCAAAAACAATATTAATCCGTCCTG 251758 37 100.0 36 ..................................... TAAAGGCTGTTCTATACGTTGCTGGAACTGAATTTT 251831 37 100.0 36 ..................................... AGAAAATAGCCCTTTCATTTCTGTACCTGCTTTTAC 251904 37 100.0 37 ..................................... ATGAATCAGGGGCAATATTCCCACCATATACATAAAA 251978 37 100.0 37 ..................................... TGAAACCCCAGGACGATCATGCCGCATCGATGGTGGC 252052 37 100.0 35 ..................................... AGGGAACGGTACGGCACAATCAAAATGCCGCTGCC 252124 37 100.0 36 ..................................... TGGTTTCCGGTTGCATGGTATAAAGTTAGTGATTAG 252197 37 100.0 37 ..................................... CGGGTTACCCTGGCAGCTAGTCCCTTTGCCCAGCATA 252271 37 100.0 36 ..................................... AATACAACTCCCATCGATAGGTGCTGTTCATCGGAT 252344 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 59 37 99.9 37 ATTCCAGAGGCTAATCCACGAGAAGAAGGATTGAAAC # Left flank : CCCCCCTGGATTATAAGTTTGCGGAGTACAAAGATAAGGTCTACGACACGTATCGAACGCAGTTGTATTGCTACGCCTGGCTCATCGAAGCAAACTTCGGACGGCCGGTTGACCGGGGGTATATTGTATACACCCGTAGTAATAACCGAGTGGTTGAAATTCCGGTTACGGAAGCGGATACACTAGCTGTAAAGCGGGCAGCCGAAGCGATTTTTACGATCATCGACCGCAATTTTTACCCGAAGGCTACCAAGGTGAAAGCCCGTTGTGTAACTTGCACCTACCGCAATATTTGCATCAAATAAGCCTGGTCCGGGGAGCAACGTATTTTGAATGGGCTCAAATTGGTTAGTAGTGCGCTGGTTGTCAGTATGTTGTGTTTACGGAAGGTTTGTAAAAATTGCCAGTTTCTTATGTACTTTGACCTGCTAATAAACAAGAAAGAGTGTCCTGAAAAAGGCATTAATGCCTTGCCTATGAGTCAGTTAAGTGCCCCGACT # Right flank : CACTTACCATAGTCCGTTTTAACCAACCCCGCCGGTATTCCAGAGACTAATCCACGAGAAGGATTGAAACCAGATTGATGTACCAGCTTTGCTGTAGAATGCCCAACTTCCTGAAGCCATCCGTCGTTTATTCTGATACGCATTAATCTTTCTATTACGTTTGCTATCTAATGATCAAACGCATCGAAAATCATAATGAAATCATTCCTGAGTTGGTTTTATACCGCCACCCTGATGTTAACAGTCACGCTGTCGGTTAGGGCGCAAAACCCAAAAGGGTATAATCTGGGCGATGCCGTAGCCGATTTTCGACTTAAGAATGTGGATAGCCGCCAAATCACCCTGGCCGATTATAAAGACCAGCGGGGCGTAATTGTTGTTTTTATGAGCAATCATTGCCCATTTGCAAAGGCCTACGAAGACCGTCTGATTGGGCTTGACCGGAAATTTGCGACGCAGGGATATCCGGTGCTCGCCATCATGCCCAACGACCCCAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCAGAGGCTAATCCACGAGAAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //