Array 1 56994-57225 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYHC01000002.1 Chelatococcus sambhunathii strain DSM 18167, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 56994 32 100.0 35 ................................ GAACGGGGAGGCTGTAGATTGGATCATGGCACCAT 57061 32 100.0 34 ................................ ATGTTCGGCCCCCCGTGGCGGTTGTTTTCGAGGA 57127 32 100.0 35 ................................ GTGCTCGATACCGAGTATGCGGCCATCGGCCTGCT 57194 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 100.0 35 GTCGCTCCCTACGCGGGGGCGCGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAG # Right flank : CCGGCTGCAGTCGAGGTCGAACACGATCATCGGGCTCGGCGCAGCGGTGTTGCGGCGGGCTCTCGGCGGATGCGGGCCGCCTGTGCCGTGCGAAGCGTTCGGGGCGCTCTCGCCCCCGATGATGTTGCTCCCGTGGTCAATTCGCTCTGTTGTGGCGTCAGACGCCGTCTTCCCCGTCGTCAATCGGCACGAGGAAGAGCACATCAAGGCCCTCCTCCTCGCCGTCGAGGGGTTCGTCCTCGTCGAATGCCTCCGCGTCCTCCTCCATCATGAGGTCGAAGGTCTCGGCTTCCTCCTCGCTTGCCGGGCGCAGGCTGAGCGGCATGATGCCGTCCCACAGAGGCTCGCCATCGCTCGTCATCTGTCTGAGGTCGTTCCTGAAGGCCTCCTGATCGAAGACGGCGCGGGCCTGTTCCTCGTCGGCGTCGATCACGGCGACAGCCTTGCGGCCGATTTCCAGTGTATACATGTGAGGTCCTTCATCTCGGGAAGCGGCGCGA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.40,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 158300-157735 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYHC01000007.1 Chelatococcus sambhunathii strain DSM 18167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 158299 32 100.0 34 ................................ ATCGGCAAGGACGGTGAGTGGATCTGGCGGACCG 158233 32 100.0 36 ................................ GAGAAGCTTGGCGAACCGAACGGGCTTTCGATGCAT 158165 32 100.0 35 ................................ TGAGGGTGTCATGAAAACCGACATCGCCATCTGGA 158098 32 100.0 35 ................................ CTGCTCTGCTCCGGCATCAGGCTTTGGCGCCGCCT 158031 32 100.0 35 ................................ ACGCGCAACATCAACAACGTACTGCCGGGCGCAAA 157964 32 100.0 33 ................................ TCGACGAAGGTCACCAGCTCTGCCTTCATCGCG 157899 32 100.0 34 ................................ ATGCTCCGGGAGGCTGGCAAGCGCGTCGCGCAGG 157833 32 100.0 35 ................................ CATGATCGAGGCTATCCGTCAGGCGGGCCTCTATC 157766 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 9 32 100.0 35 GTCGCTCCCCGTGCGGGGGCGCGGATTGAAAC # Left flank : CATGCGAGGGCGAGGCGGGGGGCGCGGCCGGAAACGCGGGCGGGTTCGGACCCGGCGCAGGAACACCAGATCGCAGCCCTGCCCCACCTGTTTGACGGTGGCGGCACGCGGCGATAGCCCGCAGCGCGATCGGACGGATAGAACCCACGGCGCGAATGGCGGCCGCCCGATCTCAACCCCGGCCGGCGGCTTGCGCGATCATAACATGGCGTGCGTCTGCGTCGGGTGCAGGCGGGGGCAGGGCCGATGACCGGCCGACAGTGCCGCGTTGGCCCGGCCGAGACGCCACCCGCAACCGCAGCACGACCAACTGCGCGTCGGAAGCGCGAACCCCAAGCATGCCGAAAAAACCGGCCCTGTTCGCGCACTCCCTGGCTCCTTGACATCGTTGAAACATCATCGTCACGCAGAAAACGCTTCGCTCTCCTGGGCAGCGGCACGACGCGGTTCGCGCTTCCGGCTCTATTTTGCTTGTTCCTGCAATCGGCTAAGAAGAGGCG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGCGTCCGAAGGCCGTCTCCTTCCATGGCGTCGCTCCCCGTGCGGGGGCGCGGACGGAAACTCGCGGCGGTGCCGGCACTCGCGCCGGTGCTTATTGCCTTGCTATCGCCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //