Array 1 15265-17917 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPN010000010.1 Arcanobacterium phocae strain 14235 NODE_10_length_102289_cov_81.422827, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15265 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 15326 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 15387 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 15448 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 15509 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 15570 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 15631 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 15692 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 15753 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 15813 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 15874 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 15935 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 15996 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 16057 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 16118 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 16179 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 16240 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 16301 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 16362 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 16423 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 16484 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 16545 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 16606 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 16667 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 16728 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 16789 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 16850 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 16911 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 16972 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 17033 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 17094 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 17155 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 17216 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 17277 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 17340 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 17401 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 17462 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 17523 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 17584 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 17645 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 17706 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 17767 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 17828 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 17889 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 44 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //