Array 1 17114-18122 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZDG01000087.1 Prevotella copri strain iT2513 NODE_38_length_20534_cov_125.681_ID_75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 17114 30 100.0 35 .............................. TACAACACCTGACCAGTCAGCATGATGCCAATTTC 17179 30 100.0 36 .............................. TACAACAGTTTGCTGCATGCCGAGTGAATCAAATTC 17245 30 100.0 35 .............................. TACAACTCATCTGCTACCGATAAGCGACGTGTTGG 17310 30 100.0 35 .............................. TACAACCCTTACAAGAAAAAGTAATCATTTTACAA 17375 30 100.0 35 .............................. TACAACGGAAGTGCAACGGCCGCTATTATTTCGTA 17440 30 100.0 35 .............................. TACAACGTTTTGCAACGCTTACAGGTGTTAGCGGT 17505 30 100.0 36 .............................. TACAACACCCCTCACAATATATAAATAAGGTAACGA 17571 30 100.0 36 .............................. TACAACAGGACGGCAGTTAAACAACTCAGGCGCAAG 17637 30 100.0 35 .............................. TACAACACCCATTTTTCACTGTGCGCTACACGGAA 17702 30 100.0 36 .............................. TACAACTTTTTCCTGCCTCGTTAGTCCATCCTCAAC 17768 30 100.0 35 .............................. TACAACCGACAACGAAAAGTTTAGATTAAGAAGAA 17833 30 100.0 35 .............................. TACAACGTCATATTTGCAAAGTTAAGATAATACAG 17898 30 100.0 35 .............................. TACAACAGTACATGAAATAGGCAACAACATGCCAG 17963 30 100.0 35 .............................. TACAACACTTATTCAAAGACCACTCATTTTGTTGG 18028 30 100.0 35 .............................. TACAACGCAAAGTTCCAAAAGTAACACCATCTTCT 18093 30 96.7 0 ..........................T... | ========== ====== ====== ====== ============================== ==================================== ================== 16 30 99.8 35 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : ATATTATTCTGGAGAAATAAAAAAACTTTCCTTACCTATTATGACATGACTGAAGATAGACTAAATGCTTATCATATAATGTGGTTATTTGTGTTTTTCGATTTACCTGTTACTACGAAAAAAGAGATGAAGGCTGCTTCTCTTTTTCGTAAAAACTTGGAGAAAGATGGTTTCTCTATGATGCAATTTTCTGTCTATATCCGTCATTGTGCATCAAGGGAAAGTTTGGAAGTGCATGTAAAACGGGTAAAATCTTTGCTTCCGGAGGCTGGAAAAGTAAGTTTGTTAAGTGTAACAGATAAGCAATATGGAGATATCTATAACTTCTGGGGTAAGCCCAAAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGCGAACCTATTCAATTGGAGTTTTTTTAGTACTTTTGCATTAGAAATTATATCCTACTCACCATTTCTTATTAGATAGAGTGTTTGTTATGCGCTGAAAATCAGTATGTTCAAATCTGTAG # Right flank : ATATTATATACACGAGAATGGCATAGGGGCTGGCGCAGTTTCTGAATATCTTGGAATATAGGCAAGAAAGAGTCTTGTTCTCCACGGACTTCAATCTTTTCAAAAGAAGAACGGAAAAGATAAAAGTATCTCTGTCAGTATATGATAGTGCGGTAAAATGTATTGAGGAAGTGGAATGTGGCAAAAGAACTCAGCAAAACTATTCTTCTGAACTAAGAAACACCATTTGCCCAATAGATAAGAAAAACAATGCTGATGTGACGATAAGGGCCAACACGCCGTAGATTGATTGGGGATTGTTGACACAGTATCCTATGCAGGCAACCCAAACAGCGAAGGACAAAAGGCTGTTGTCACCCAACGCTCATATTTCTTAGAGTGCTTCGGGGGAGTATCTTCGCCTACTACTTCAATGCTAACGATTTCTACCTTTATTTCATGTTCGGGCTTGTTCGATTCTTCGTTGTTGTTTGCTGCGTCTGATATGCTGTTGTTGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //