Array 1 9354-13079 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBD01000060.1 Campylobacter concisus strain AAUH-35UCil-a 1101865, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 9354 30 96.7 34 ......T....................... AATTTCTTGTCAAAATCTTTTCTTTCAGCGTCAG 9418 30 96.7 35 ......T....................... ACAAATTTAGTTAAGAAAGTCTTTTTTGGCTCAAA 9483 30 100.0 37 .............................. TACTGAGAAAAATAGATGAAAATGTAAATACCCTAAA 9550 30 100.0 36 .............................. CTTAATGAAGCCCTTAACTCTACGAGCAATCATAAA 9616 30 100.0 37 .............................. CTGCCTATCTCTCGCAAAGGTTGGGGGCTGGTATTAG 9683 30 100.0 34 .............................. TTACATAGGGCTTGGTATTTTCTTTTTGTATACG 9747 30 100.0 34 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGT 9811 30 100.0 34 .............................. GTTTTTTGGTCTCTTTCGCTGCTTCTTTTGCTTT 9875 30 100.0 34 .............................. TCTGCATATTGTGTAGCCAGCGCTGCTTTTGGCG 9939 30 100.0 38 .............................. TGGCGTTGATATTGGCGTGCTTGGCGAGCAAGTGGCTT 10007 30 100.0 34 .............................. ATATCATCGCCACAAACAGTATGGACAATACTTG 10071 30 100.0 34 .............................. CCTTTGTTCTGCCTTGTTTTGGTAAGCCCCCTAA 10135 30 100.0 38 .............................. GTAAGCACGTAACCCTTAGCCCGTCGTCTGTCTTTTCA 10203 30 100.0 38 .............................. GAAAAATCACGATAGGGCATAAAATAATGCCTAAAACT 10271 30 100.0 37 .............................. AAATATGGTAGCGTGATAAATGCAGAGGGTGGCGAAA 10338 30 100.0 35 .............................. AATAAAAATTAAAAATGAAAGAATTTCAAAGAATA 10403 30 100.0 35 .............................. AGATCGATACGCCTTAAATCATAATCAGGCAATTT 10468 30 100.0 35 .............................. ACAGCGAAAAATACGCCATAAGCAACAAGAACAGC 10533 30 100.0 35 .............................. ATCGCACTGGCTACAAGTCCAGCCGTATTGTTATC 10598 30 100.0 37 .............................. GCTTTTTGATGTCGTTTGTCGTGAGGTAAATTCTATG 10665 30 100.0 35 .............................. CTCCTCTTTGTAATTTTCAAAAAAACTTAAAAGGC 10730 30 100.0 37 .............................. TGCTATTTGTTCGTAAAATTTCCACGCTGGCAAGCTC 10797 30 100.0 35 .............................. TCAGAAAGAAAAATATGGGAACCAGAAAAAGAAGA 10862 30 100.0 35 .............................. GCAACCTTTGATAACTTTTGGCTATCTCTTGGCTT 10927 30 100.0 37 .............................. AGCCTTTTTTTCAAAAAACAAATTTTAAATATCCAAA 10994 30 100.0 36 .............................. TAGATGCGGTGGCAAACCGCGAAAAAAATGGGGTTA 11060 30 100.0 34 .............................. CTGGCTTTTTTGAGGGACTAAGAAAAAATATAGC 11124 30 100.0 37 .............................. ACGGGTATAACAGCCTACCTAAACAAGGTGTAAAAAG 11191 30 100.0 37 .............................. AGTCGATTTTGTTTGGCTTAGCGTCGTAAAACTTGTC 11258 30 100.0 37 .............................. AAATACGCTAGCGTGATAAATGCAGAGGGTGGCGAAA 11325 30 100.0 38 .............................. TCGGGGTTGATGAATACGGCAACTTGATCAACCACTAC 11393 30 100.0 34 .............................. TAACGCATATTGAGTGCGGCGATGGGCAAAACGA 11457 30 100.0 38 .............................. AACGATAGTGAGGGCTTTATTTTAAGCGAAAAAACTGG 11525 30 100.0 38 .............................. ACTGACGGAAAAGAGAACAAGGACAACAGCACCGCCAA 11593 30 100.0 36 .............................. AGAAAAGAGTATTTAAATCAAGTTTTAGCCGATGGC 11659 30 100.0 36 .............................. TTGATAAAAAGAGTGCTGACTTTCAAAATCTAATGG 11725 30 100.0 35 .............................. ACGAGTGGATCACTTCAGCACAAAACCCAAGCGTT 11790 30 100.0 34 .............................. AAGGCGGTCTTGTAAGAAGTTCAGCTTCTGGCAA 11854 30 100.0 35 .............................. AGCCACGAAATAAAGACAGAGCAACAAGGATTTTA 11919 30 100.0 37 .............................. CAATAAACTACGCCAACTTTTCGTCCATATCTATCAG 11986 30 100.0 34 .............................. CTCTAAAATATAAGTTAGCTTTAGAGAAACTAGA 12050 30 100.0 37 .............................. TCTAGCTGTATATCTATATGTGCCCGCTTAGCCCATT 12117 30 100.0 33 .............................. AAACAAAAACAAGGTTATGAGCCAGTTATCTCA 12180 30 100.0 37 .............................. ATAGGGGTGACACCCTTGTCACTATGCAATGACACAT 12247 30 96.7 36 ..............T............... TTTTGTTGTATGCCTCTAGGCTGTTATTAGCTATCA 12313 30 100.0 36 .............................. CAAATCAAAGAAGGAGACAAAACGATGAATTACAAC 12379 30 100.0 38 .............................. TAAAGTCTAAAGCTGGCATATACTTCATAACGAAATTT 12447 30 100.0 37 .............................. GCTTTAAGCGTGTGGGATAAGCTCACAAGCGGAGATT 12514 30 100.0 35 .............................. TATCCTCTTTTAGCGCCAGCAGATTATAAAGATCG 12579 30 100.0 35 .............................. CCGCCATATTTAAAGGGCGGTTTTCGTTGGCTGTT 12644 30 100.0 37 .............................. GCTTATCGGTCTTTGCTACTTGTTCTTTGCTTAGACC 12711 30 100.0 37 .............................. TATCCCCAAAGGGCTTTAATAAGCCCCTCTTTATTTC 12778 30 100.0 36 .............................. TTAAGATACTTTTTCATAAAATTTAACCAATTTTAA 12844 30 100.0 40 .............................. GAGCTATATAAGAGCTAATAGAAGCTAGAGATTGGCTTTA 12914 30 100.0 40 .............................. CTGATGATGCCCTTAGGTTATATATTAGGACTGGTAACAA 12984 30 100.0 36 .............................. GGATTTGGCTTTGTTTCTACACCAGTCCCACCGCCA 13050 30 90.0 0 ..................T......T...T | ========== ====== ====== ====== ============================== ======================================== ================== 57 30 99.7 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CGAGCTTGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGACTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTTGCGTATTTAAACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACCTAAAGGCCTATAAATCAGCTTTTTGGTGCG # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //