Array 1 5817-5009 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCZT01000436.1 Pseudomonas aeruginosa strain 34 scaffold_435, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5816 28 100.0 32 ............................ AATCGGGGCTTTCTTGATATCCGTCCAAGCCT 5756 28 100.0 32 ............................ AGGCACGCATTGCCTTGAAAGGCGTTCTCTTC 5696 28 100.0 32 ............................ TATGATCATGCCCCGTCCTCCGGCTCCAATAC 5636 28 100.0 32 ............................ TGAAGGCCAACCCGCAAGTCAGCAAGGGCATC 5576 28 100.0 32 ............................ AGGTTCGTGGCGGACCGGAAAGACCTCAACCG 5516 28 100.0 32 ............................ CTGGACGCAAGCAAGATCGTAGGGCGCTGCCC 5456 28 100.0 32 ............................ ACCACCAAGATGGTCCAGGCCGTGCGTTCGAT 5396 28 100.0 32 ............................ GGCCAACCAGATCGTCTACACCGCCAACGTGA 5336 28 100.0 32 ............................ TTGATGGGTTTGTACTCAGGCCCGGAAAACTC 5276 28 100.0 32 ............................ ATCAAGGTCAACCTGGGCTCCGGCGCCGGCGG 5216 28 100.0 32 ............................ AGGTCTTCGAACTCGAACAGCTTCGCGAACTG 5156 28 100.0 32 ............................ TGTGTACCCCTGCGCGTGGAGCGCGGGGCGAC 5096 28 100.0 32 ............................ GTCATGGGCGAGCTCTACGCCAACCCGCAAGC 5036 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : TCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGTTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGCCACAGGCGGTATCCGCCGATGCCCCGGAGAGCCGGCGGATAACCGCAAGCGGTCATTCGCCCTACGGATCGGGCTCCTGGCATGCCCTCCGAGTGGCAGGGCGAGTCTTTTGGACGCTTGCAYAAGGAYCTCGCCTGGYAAGGCGAAACAAGAGGCCAAGGCAAGCACGACGCCCGCTCAAGCGCTAAGCAACAGCTTCCCCCCTTAGTGCCGTGCAGGTAGCGACGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //