Array 1 102706-97495 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSLJ01000007.1 Sporomusa sphaeroides DSM 2875 SPSPH_contig000007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 102705 30 100.0 35 .............................. GCAGCCTTAAAAGTTACCATATCAGACCTTATCGG 102640 30 100.0 36 .............................. CTTAGGCGGGCGGTTTTGCGAGAGTTGAGGGAGTTT 102574 30 100.0 36 .............................. TTGGCATGGCAGGTTTTGCGGGTGAATTACGCTGAT 102508 30 100.0 36 .............................. GAAGGCATCCAAAGCGGGTTAAATTCAACTTTCCAT 102442 30 100.0 36 .............................. TCTTTCTCCGGCAATCTCTCCGTCACCGGCACCCAC 102376 30 100.0 35 .............................. CTTGTTTCGGTGTCGTGGTACTTCATAAGGAGTTC 102311 30 100.0 36 .............................. TGGTGCCGATAAGCCGGAGAAAATAAAGTCAATTAA 102245 30 100.0 36 .............................. CCGCTACTTGACGGCGTAAAAGCTGTACCAGACTTT 102179 30 100.0 37 .............................. ATGGTCTTTGGTGTGGTGCAATTATAACCGCGTCTAC 102112 30 100.0 35 .............................. ACCAACCGCCGCGAAACTGCGGCAACTGCAATAAC 102047 30 100.0 37 .............................. ACTGTCCACCGATCGCTGTTTGCAGATTCTGCCCACC 101980 30 100.0 34 .............................. GCATTGTGCAAGATGTTATGCGGAAAATCATGAA 101916 30 100.0 36 .............................. TATTTATTGGCTACACACCATATTAAGAGTCGGGGT 101850 30 100.0 36 .............................. CTGTTACGGTTTCTCTCTTGACTTCTATATAGTTAC 101784 30 100.0 35 .............................. AGGTAGACCGCTTTAATGATTCTAAACAGGCAGAG 101719 30 100.0 35 .............................. TATATAGCGCAGGAGGTGGTAAAAATGTCCCCATA 101654 30 100.0 35 .............................. TTATCATTGTCGGTCAGAAACTGCTTGAGGGGACC 101589 30 100.0 36 .............................. ACCAAGCGGCTGATTTCACTCTGCATAAATGCGGCC 101523 30 100.0 36 .............................. ATTGGCACTAGATTTAAAAGTACCAGTCCCAACCAT 101457 30 100.0 35 .............................. AGTACACATCCCTGTAACCATCTGTATGCCTTGTG 101392 30 100.0 36 .............................. AAGCGTTCGGCAGTCTTTAGTTTTGAGCGAATGATT 101326 30 100.0 36 .............................. CTTGTCGGATGGAAATTCCGATGCGGAACGGTTTAA 101260 30 100.0 35 .............................. ACTGATATATGTCGTATTTGTGGCGCTCCATATAC 101195 30 100.0 35 .............................. TTCTTTTTCAAGCAATGGGGCGAGTTTTGCGCTAT 101130 30 100.0 35 .............................. CTGCATAAGGCTGAATCATGGCAATGCCTTTAACC 101065 30 100.0 37 .............................. CGAGCAAAGAAGCCCTGGTCTGCCGCGACTCCGCTAT 100998 30 100.0 36 .............................. TTTCCTTCCTATTATATCCAAAATTGAGAATTAATT 100932 30 100.0 36 .............................. ATATCAAGCCGTGAAAAAGCTTATCGACTTGAAGGT 100866 30 100.0 36 .............................. TTGCGTTCTTGGTCCTGTAGTAGATTCTAAGATTTT 100800 30 100.0 35 .............................. AGCTGACCGAATATTATGCTTTGGTTAACTCCGAC 100735 30 100.0 36 .............................. ATTGTGCCGGCCAGCGCAGTACCGATAACTAGCAAC 100669 30 100.0 36 .............................. GTCTTATAGGCAATTGCCGCCATTATGAAAGCACGG 100603 30 100.0 35 .............................. TTTTATCTGTAAAATCATCTTCCTCTAGGAGTTTG 100538 30 100.0 37 .............................. AAAGGCCAGGCAATGAGCAAGCCGCCAGTTTCCAGGG 100471 30 100.0 36 .............................. CTGCATCCATATCGACGCTGAACAGTGTGAGCGAAC 100405 30 100.0 36 .............................. TTGGCATGAGCCGGAATATCCGCCTGGAGGTTGATA 100339 30 100.0 35 .............................. CAATGTTTTCTTTGTCGGTTCGCTCACACTGTTCA 100274 30 100.0 36 .............................. GGTAGTTGTAAGTTTTCTTATCAATTTCCTGCTCTT 100208 30 100.0 35 .............................. CTATCCTCTGTTAGCCGGCCGTTTTTAATTAAAAT 100143 30 100.0 36 .............................. CTATGATCATGACGAAGGGTGTTGGGTTGATGGCGT 100077 30 100.0 35 .............................. CTGAGACGGGCGGTAATAACTGAGTTGAGGGAGTT 100012 30 100.0 34 .............................. AGCCGCTGAGAGCATTCAATTGCATATAAATCTC 99948 30 100.0 36 .............................. GCTAAAATCAGGTTGTTAATCAGGAATGACAGTGCT 99882 30 100.0 36 .............................. AGGATTGCATTGAGCTCCGAAAATTTAGGTGCAACG 99816 30 100.0 35 .............................. TCGTGCTCACTAAGCAGGTCTTTGACAATAGCAGC 99751 30 100.0 37 .............................. AGTACCCACTCTTAAGCGCCGCCTGAGTAGCATTGCG 99684 30 100.0 35 .............................. TTGGCTTGGTGATGGAATTTATTTTTTTGAAAACC 99619 30 100.0 35 .............................. AAAGGTTGGCCTTGAGTGCAAGACTACTAGTGCTT 99554 30 100.0 35 .............................. TCCGGCTCCTGCACCTCTAATTTAGGGGTGCACCC 99489 30 100.0 36 .............................. GATTATGGCGATGACGAGTGCAGACATTTTATGAAA 99423 30 100.0 35 .............................. TCGGTTTGCGTGGCGCGGAATAGGTTAGCTGCTAA 99358 30 100.0 35 .............................. GAAGGCCAGGCAATGAGCAAGCCGCCAGTTTCCAG 99293 30 100.0 37 .............................. ATTATGAAAGCGAGGTAAAAAGCACAATGGCAAAAAT 99226 30 100.0 37 .............................. ACATGACCGGGGAAGTGGTAGACGATGGCCAAGCCCA 99159 30 100.0 36 .............................. AACAATACGAAAAGGCTCACGGCGAGATTAAGATAG 99093 30 100.0 35 .............................. TGGTTTTGCGTTCTTCCAGTGTCAAACTGGGCGGC 99028 30 100.0 37 .............................. GTATCTGAGGCAGGCGCAATTTCTGCCGCTTCTACCA 98961 30 100.0 34 .............................. ATCCAGGATATCCGGGCAGCACAGAAGGCGGGGA 98897 30 100.0 36 .............................. CTGAAAGAAGGAGCTAAACAATCTCTTTCCGGGTGG 98831 30 100.0 35 .............................. TGGAAACAGGGGTGATAGACATGGCTATAACATAT 98766 30 100.0 37 .............................. ATCCATGAGGATAACGGTCTTTAAAAACGGTATCCCA 98699 30 100.0 35 .............................. TCTGCCTTGTAGTTGGCGCATATCAGGCGAAATAG 98634 30 100.0 35 .............................. TCCTATTTATTTACTTTATCTGTTTTTATCTATTT 98569 30 100.0 36 .............................. AGAATCTGAAGAAAACTGATGAGGAGTCATACCGCA 98503 30 100.0 34 .............................. TCACGAAGTATTAATTTCCGGTTTAAACTTAACT 98439 30 100.0 36 .............................. ACAGGTTAGCGCCGTATGCTCCGAGATAGGAGCCAT 98373 30 100.0 35 .............................. TCTTTACCCGAATTACTGTCCCAGTCATCCTCGAT 98308 30 100.0 35 .............................. AGATGCTGCAGTAGTACCTTGAGCGATAACAATTG 98243 30 100.0 36 .............................. TTGTAGATACTGCCATTGTACTGCTCTGCCTTTATA 98177 30 100.0 37 .............................. TATTCAGGCTGGCAATCGGCCCTGCAGTCACCGTCGC 98110 30 100.0 35 .............................. AGGTTGTAAAGCCTTATCATAACCGAGTGACCTAG 98045 30 100.0 35 .............................. ACGAACGATCATCAGGGAATCTTAAGTATATAATC 97980 30 100.0 36 .............................. GTATGAACAAAGCTCTATTAACAGCAATGACCCATC 97914 30 100.0 34 .............................. AGCTAACCCACGACCAGGAAGCCGGGTGATGACC 97850 30 100.0 36 .............................. CGTAAAGACTCCGCAGCGACTACCGGAACTTTTCGC 97784 30 100.0 34 .............................. GTAAAACTGATAGATGGTAGATTTGCCAGCACTC 97720 30 100.0 36 .............................. CTAATATGAGATATTCTACAGTAAAAAAAAATATAT 97654 30 100.0 35 .............................. CGGCATAACGGGGCCCCAACCCCATTATTCCACGG 97589 30 96.7 35 ............................T. GATGGTCATACCTATTGTTTTATCTGTGAGACTTA 97524 30 76.7 0 .........CT....C....A..C...GT. | ========== ====== ====== ====== ============================== ===================================== ================== 80 30 99.7 36 GGGCAACGAACACATTAGATGTATTGAAAT # Left flank : AAAACCGGTAGCTTTTTTCAATATGGAGGCCAAACAATGAGCAACGTTAACTATAATTATGCGTTTATCTTTTACGACATCGGCGAAAAACGGGTTCAGAAAGTCTTCAAGGCTTGCAAGAAATATTTCAAGCATCATCAAAAATCAGTATTTCGCGGGCACATAACCCCGGCTAATTTACTTGAATTAAAGGGTGAGCTTGCCAGAATTATTAACAAAGATGAAGATTTTATCACAATTATCAAGATGAAGAGTAAAGCCGATTTCGGCGAAGAAGTCCTTGGAACCGATCACCAGAAAACGGAATCACTAATAATTTGACTTTTTCCAAGCAGGTCTTTATGGACAAGGCAGAGAAACCCTTATAAACAGTGGCTTGGTGAGGATTTTATAATAAGATTGAAATTTAGCCTGGTTAGCTTGGAAAAATATCGGGATGATCCGTAATAATGCTGGGTTTTTAGGGGATTGATCTTTGGTGAGAGGCTGATTTTCTCTTG # Right flank : TCATCGACCTCCGCGCAACCCTGGTAGAATACCAGGCACAACTTTGTGACTAATATTCCAACCTAAATAAAATTCTTTTTACCCAGCAGAAGGAATTCAGGGAAAAAAGTAGAAATAGTAAAATATTACCATTGATTAGTTATAGCTAGGGGTGCCCGACGGCTGAGAGGATTCAAATCCAACCCTTGAACCTGATGTGGTTAGTACCACCGTAGGAAAGCTTTCTGTTGATAAATCAAGCTTACCCACGTTCCTCGCCTCTGCTATAGCTAAAATTTACTTATGGAGGATGAGGAAATATGTACACTACTCAAATGGATGCTGCCAAAAAAGGCATCATTACCGAACAAATGCGTATTGTTGCGCAGGAGGAACAGATCGATATTCAGGTGCTGCGCCAGTTGGTGGCCAGCGGCAGGGTAGCCATTCCCGCCAACAAGCACCATACCAGCCTTAGCCCTAAAGGGGTCGGGGAAAAACTTCGTACAAAAATTAATGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACGAACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 113338-111675 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSLJ01000007.1 Sporomusa sphaeroides DSM 2875 SPSPH_contig000007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 113337 30 100.0 36 .............................. CCTGTCCACTGCCGCCTGATGTTGAAACCGATGCAC 113271 30 100.0 35 .............................. CTGTCCGAAAATGCTTCCATACTCATGGACGAGGT 113206 30 100.0 34 .............................. TGACCATATCCTTCGATAATGTCATTAAGTTCAA 113142 30 100.0 35 .............................. TTAAAGACCTATCCGGCAGAACTACCTTTTACGAT 113077 30 100.0 35 .............................. TTTAATACTGGTACAACAAACTATATTGGACCAGT 113012 30 100.0 36 .............................. TTATTATATCAGGTTATCAAAGAACAATCTATATAA 112946 30 100.0 34 .............................. ACCTTTAGATATACTTATACAAGGTTACTATGTA 112882 30 100.0 35 .............................. TTATAAGTCAAGCAGTACCAGCAGCAATCCGCGAG 112817 30 100.0 37 .............................. TAATTCAACCAGGAGAAACTTGTGCCGTAGGCACTGG 112750 30 100.0 36 .............................. AGTTTGATTTTACCTTTGCTTTCGTAGATTCCATAT 112684 30 100.0 35 .............................. ATTCTCCAGTCTCCAGAGAATTCGCTGAATTCTAC 112619 30 100.0 34 .............................. GCTGGTTTCAAGAGTGACACCATATTCCCTTGCT 112555 30 100.0 36 .............................. TCTTTCTCCGGCAATCTCTCCGACACCGGCACCCAC 112489 30 100.0 37 .............................. TAGACCTTTATAAACCGCGCCATATCTTGCCCCGGGG 112422 30 100.0 35 .............................. AACTAAGAATGGCATCGGTTATCGTACAGTAACAG 112357 30 100.0 35 .............................. ACATTATATAAATAATGCTGTGCATTCGTTATCTC 112292 30 100.0 35 .............................. ACAGAGTAGCCAGAATAGTCTCTTTGGTGGTCAAG 112227 30 100.0 34 .............................. TGAAGAAGTCGAAAGTTACCTCCAACAGTATTCC 112163 30 100.0 35 .............................. GAGCTTACCATGCATGGACTTAAGAAGCAGTCCAA 112098 30 100.0 35 .............................. AAGAGCTTATCTAAGTTTAGCCCATAGAGTTCTCC 112033 30 100.0 36 .............................. TGGGTGCCTCCAAAGCATCCCACAGCCAATACACCG 111967 30 100.0 37 .............................. ACTGGATTTCATCTGGGTTATCTGTAGTCAAAGCTTC 111900 30 100.0 36 .............................. CCGGTTCCGGTGAGGCAAGCAATGCCCTAATGTCGC 111834 30 100.0 35 .............................. TGGCATAGGTCTGGTATGTTCCACGAATTATAGTT 111769 30 100.0 36 .............................. ATTTACCGGATTGGTTGTTAAGGTAAAAGGCGACTT 111703 29 93.3 0 ........................-....C | ========== ====== ====== ====== ============================== ===================================== ================== 26 30 99.7 35 GGGCAACGAACACATTAGATGTATTGAAAT # Left flank : CGACTCACTTTCTGTAATGGCAGTTAAAGCCATTGTGGAAAAAGCAGGTGTTTAATACAGAATGTAAGTTACTACTGACCGTAATAGTGAATGCGTAATGGTTTGCGGCCATTTATAAGGTAGGAACAGGCAAAAGGGGCTTAACTCTGTTGGGAGTTGAGCCCCCTTTTGCGTGCGCAGGTGCGGTTTTGTTTACTAATATCGAACCTAAAGAGTGAGCTTATCAGAGTATTAATAGAAATGAGGCTGAAGAGTAAAGCCGGTTTCGGTAAAAAGATCCCTTGGAATTGAGTAGCAGAAAATGAAATCACTTATAATTTGATTTTTCCAGGCAGGGCTTTATCGATAAGGTAGCGAAACCCTTATAAACAGTGGTTTGGCGGGGTTTTTACAATTAAGACAGAATTTAGCTTGGTTAGCTTGGAAAAATACTGGGATAAACCTTGTAGATGCTAGGTTTCTGAGGAATTGCTGTTTTGAAAAACGCAGTGTTTATCTTG # Right flank : CGCCATGTAACATGATATATCATATTCTGTTATATTTCCGGGTTCAGCCGAAAAATAGTCAGGAGTTCGTTAACGGCATGTTTGGGATAATTGCCGTAATTGTACAACCTTATTTGAATAGTAAAGAGGGTAGAACCGGAATGGAAAAACAGGGCTTAACTCTAGGGAGTTAAGCCTCTTTTATTTGCTAAAAGTTCCTAACAAACTCGATAAATTTGCAGGATTTTCCTAATTATCCTGGAATATATTGTATATATTGTTAAAATGTAATGCTTTTACCGAGTTTTCGACAAAAAGAAGAGGTGATACATTGCTTTACCATGAGCTGATCGTCACAATACACTTGCAAACGGACTTGCCTGCGACCAAAGGTTACGAATACTTATCAAGAGTAATATCTAGTGCCATGCTGAATGATACCGAACTTAAGGAATTGCACGGTAAGCGGGCTCTAAAAGGGTATTCGTTCTGCAACTTATATCCCCGGGAGGCCGATAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCAACGAACACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //