Array 1 158310-159665 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOHW010000004.1 Bacteroides cellulosilyticus strain MSK.18.57 NODE_4_length_251390_cov_111.976, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 158310 47 93.6 30 .....A...............T....T.................... TGCTTGGCAGTTCTTCGATGATCGATTGCT C [158324] 158388 47 100.0 30 ............................................... TTTGCGGTCGCCGCTTGCGCTGCAGTTCAC 158465 47 100.0 30 ............................................... ACTTTTTCGTACAGATATGCGCAACGCAAT 158542 47 100.0 30 ............................................... TGCCCCTATATTATTACTCTAATGTGGCTT 158619 47 100.0 30 ............................................... CTGTGCGTCTGAGGGGATTTCGTCACGCCA 158696 47 100.0 30 ............................................... AGACCGGAGCAACACCAGGAAGTTAAGCCC 158773 47 100.0 30 ............................................... CACGTTCAGGTGATGTTCCCGAAGAGTTTT 158850 47 100.0 30 ............................................... TGTTCACGTTGGACGCTTGTAATACAGATA 158927 47 100.0 30 ............................................... CTGATGTCAAGTATGAGAAGGGCGGATTGG 159004 47 100.0 30 ............................................... CTGGACGAGCTAGATAACTACAAGTTCATA 159081 47 100.0 30 ............................................... CAAGGCAGAACAGGGCAACATTAAGGATGT 159158 47 100.0 30 ............................................... TGATTTCATGGATTATTCGCAGATCAACGA 159235 47 100.0 30 ............................................... CATATATGCGTTGCTCCAATAACGGAAAAT 159312 47 100.0 29 ............................................... CGGCAAAGGATTTGGCGTTTGCGGAAAGC 159388 47 100.0 30 ............................................... TGGAGCGACCAAAAGAATATGAAGCGCACA 159465 47 100.0 30 ............................................... ATACTTTGCTTTGAACACCACAACGAATGG 159542 47 100.0 30 ............................................... TGAGTTGCGTTTCACGAAAGCCAACCCACG 159619 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.6 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGAAACAGT # Left flank : AATATCTTCGAATATACTTTCGACGAGCATGATGAAACGGTAGCTTATTCTCTGTCTATTCCTTTCGTCTCTACGTTTGTTTTTGCAGCGGTAATGAAGCATCAGGAGGCTCCGGGTACTACGTTCAAAAAGCACATGGCTATTGCTAAGGGTTTGCTGAGTGAGGATGATTACTTGCTTCAGGAAATTCTCTTTAATCCGCGCACTCCCTCGCAAGTGGAAAATATTCGTCTGGAGCTGAAGAATTTGCTGGAAATTATCAGTACGAAGGATGCGGAAGGGATGAAGCAGTATCTGACGAAGATTAGGGAAAAGATAAAATAGAATAAATAGGTGAGATTAAGGGATTGAAGAGAGGGGAGGTACGGAAAAGGAAATGGGGCTTCTCTCTTCAATTCGTTAATAAAGAGAGGTGATGATATTTAGGATTAGGTAGGGGCATACTTATTTCTAAAATTATTGAAAATAGTCAAATATTGGCAGGAATGATATGAAATTCT # Right flank : TACAACCCGCATTACAAACTGATATACAATTGGTTACAAACTATTTTTGAATTACAAAAACGATACTGTTTTCAATTAAGAATCCCGCATTTAAGCGGGATTTCTTTTTCTAGAAAAGCTCTAATTGCTGACCGGGAGTATTTATATCCAAAGATTTTTTCCCATAAAATAACTCTATATTTCCAAATTGCTTATCTGTAATACACATAATTCCAACCTGCCCATGCTCCGGTAAGAAAGATTTAACTCTTTTTATATGAACTTCTGCATTCTCACTACTAGCACAATGGCGAACATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGCAGATTCTTCTTAAAATCTACATATGCTTTCTTATCCTTCTTTGTTTCAGTAGGCAAATCAAATAATACAAGTACCCACATAATACGATATTCACTAAATCGGTTCATCTCACATTTCCGGATATAATATTCTACGCAATTCACCACTAAAGCATTTATACAGAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //