Array 1 49269-43296 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGM01000006.1 Acinetobacter junii strain TUM15082 sequence006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 49268 30 96.7 30 .............................G ATTATAACGGCATCACCTTAACCAACGATA 49208 30 93.3 30 ............................TA CACGTTGACAGGGCGAAGTGTATCGGCCTT 49148 30 93.3 30 ............................GA CGAACGGTCAATCCCTCACCACTTCCACAC 49088 30 100.0 30 .............................. GAACAAATCAGAACTTTTCAAAGCAGCTCA 49028 30 96.7 30 .............................C ACGTTTCAATCAAATACTGAGGATTAAAAA 48968 30 96.7 30 .............................A ACTCATAAACCACCCACTCGCCATTCCACC 48908 30 96.7 30 ............................T. CAATTCGACACTTACCGCCTGATCGCTGAA 48848 30 96.7 30 ............................G. GTTCGCCCACTTTTCATTTCAGAAAAACCT 48788 30 96.7 31 .............................C CACCCAAGGCTTCAGTTTAACGCAGTCATTC 48727 30 96.7 30 .............................C AGCGGATACATCGCAGAAATGGTATTGAAT 48667 30 93.3 30 ............................CA TGAATCTTTTACAAAGTCTTTGCCATTAAT 48607 30 96.7 30 .............................A ACAATGGCAGCATAAAGGGTGTCACTTTTG 48547 30 93.3 30 ............................TG TCGGATTCCAGTTACGTGTGGGTGATGAAT 48487 30 96.7 30 ............................T. TGGCACCACCACGCAACCTTCGAGTTTTTT 48427 30 93.3 30 ............................TG CCCTCATCAATTTCAGCGGTATTTTTTGCT 48367 30 96.7 30 .............................G AAAAAGAAAAACCGCATTTAAGCGGCTTGT 48307 30 96.7 30 .............................A CCGCCAACATTAGCAGCAAAAGTAGGACGA 48247 30 93.3 30 ............................TC AGGAGCAAACAGCATGATTATTCGGCTATC 48187 30 96.7 30 .............................C ACAGCAGGGCAGATCACAGCGTAAAGCACG 48127 30 93.3 30 ............................CA CACCCGATGCTCTAAACGGGATCATGTTCT 48067 30 93.3 30 ............................TA TTGCTAATCAAGCTGAAGCCAATGCAGAAA 48007 30 96.7 30 .............................G GCATTCATTGCTGAGTGTATCAAACGTCAA 47947 30 96.7 30 .............................C TCCAAGTCTAAAAAACATAAACGACTTAAG 47887 30 93.3 30 ............................TA AAACCTCGCACCATCACATTAAACTTGGAG 47827 30 96.7 30 .............................C CGCGAAGAACTTTAGCGACTTGAGTTGCAT 47767 30 96.7 30 ............................C. GAAATTGAAAAAGGCAAGGCAGTTGAAGAT 47707 30 96.7 30 .............................C ATCTAGTTGGCTTTTGACTGGTAATTCATC 47647 30 96.7 30 .............................C GCAAACTTAACTTTTGAAATCCGCACAAAC 47587 30 96.7 30 ............................G. CACGGGGTTTATGAGATCAATTTTGACAAG 47527 30 93.3 30 ............................TA AATCCCCAACCTTAAACATGCTCACCCCCA 47467 30 96.7 30 .............................C TGTAAAAACGCATTGAAAGAGCGCTTAATT 47407 30 93.3 30 ............................TG TTGATGTTTCGTTTCTTAAAAATCTTTCTG 47347 30 96.7 30 .............................C CAGCAGCATTAGAAATAACTTGTTGAGCAA 47287 30 96.7 30 ............................T. ATGACGTTGATTTATCAAACGTACCTTTAC 47227 30 100.0 30 .............................. AATCTACGCATAACATAATGCACAGAACAA 47167 30 93.3 30 ............................CG AACAGGTTTTAGCTGAATATAAAGAAAACT 47107 30 93.3 30 ............................TC TGCAAACTCATAAATCATTGCAACATCCAA 47047 30 96.7 30 .............................G CATATCGTCCACTGGTCGGATCAATCCCCA 46987 30 93.3 30 ............................TG ACGATCTCAAAAAGCAATTTGAGCAAGACC 46927 30 93.3 30 ............................TC GATCACTGCTGTGTAATTTCTAAAACCTGA 46867 30 96.7 30 .............................A TGCAGAATCAGAAACAGACCAACAAAAAAA 46807 30 100.0 30 .............................. CTGATAAAGAAACGTCGCCAAATGCGGTAT 46747 30 96.7 30 .............................A CCCTTTCGAGCCAAAGCGCAACCTGTGCCG 46687 30 96.7 30 ............................G. GCTCTCTCCACCCCACCGCAACTGCATCAG 46627 30 93.3 30 ............................GA TGTAGGTACGCCACCTTTTGAGCCGATAGC 46567 30 93.3 30 ............................GA CCAGTGAAACCATTACACCTGCAGGAGAGC 46507 30 93.3 30 ............................TG CCAATCCCTGCAGGAATGCACCTGCGCCAA 46447 30 93.3 30 ............................GC TTCCTGTGATCTCTAATGCTATTGGGTCAA 46387 30 100.0 30 .............................. CCAGCCATTTTTGACAGTCTGCTTGTGAAA 46327 30 96.7 30 .............................G GTGAAATTACCCAGGTATCACACCAGGTGA 46267 30 96.7 30 .............................G TGTAGAGGTCAAAAGAATTGATCATTTGTG 46207 30 96.7 30 .............................G TGATTGAAGTTTTCAAAGACTCATTGCTGC 46147 30 96.7 30 .............................A GTTGCAATGCTGGCATTAAGTTACCTTGAT 46087 30 96.7 30 .............................A TTACCTGAAAACTTTACAATCCAAGTAAAT 46027 30 96.7 30 .............................G CAGGTCAAATCATCCTTTCAGCTTTTGGTA 45967 30 96.7 30 .............................G CAGCGCCACCTCTAAGAACTTTTGCTACTT 45907 30 96.7 30 .............................A GGAGGACTTTTTTTGCAAAGTTAGATAAAA 45847 30 100.0 30 .............................. AAGAAAACGTCAGCATGACCACGACCGTAA 45787 30 93.3 30 ............................CA CACCCGAAGCTCTAAACGGGATCATGTTCC 45727 30 93.3 30 ............................GA TCTCAAAGAATCAGGTCAGATCGAACAAGA 45667 30 100.0 30 .............................. TAATCTGAACATTGGCTGGTGGATATGGTC 45607 30 93.3 30 ............................GA CTCAAGTTCTTCTCTCTTGTTCTTTCTGAT 45547 30 93.3 30 ............................GC ATTGTGGCCCACTGCGCCAAAATGCTTTGC 45487 30 100.0 30 .............................. CGCGCTCAACTATGATCATCTGATAAGTGA 45427 30 93.3 30 ............................CA ACCACCCTCGCCCTTATCACCGCCAAACAA 45367 30 96.7 30 .............................A CGTAAAAATTGATCTGCTGCACCTTGATAG 45307 30 96.7 30 ............................G. AAAGAATTAGTCCTAAATTGTCCTGTAAAT 45247 30 93.3 30 ............................TC GATTTGAATCTAAAATAGACTCAGTCAATT 45187 30 100.0 30 .............................. ATAACCAATTAATTGGTTGTTTCATGAGTT 45127 30 93.3 30 ............................TC AGAGCGCAGCACAGCAAATGGCACAAAACT 45067 30 96.7 30 ............................G. TACAGCGTAAAATATGGAATTTTAAAAATC 45007 30 96.7 30 ............................G. TGATTTGTACAGTAATTCGCTTGTTATTAT 44947 30 96.7 30 ............................T. GTGCGAACAAGGACTGGATTATTAAATCCT 44887 30 96.7 30 .............................A GCCAAAGCGCATGAGGTGGCGAATCTGAGA 44827 30 96.7 30 .............................A CACTCACCCAAATTAGAGCAGCTTTGCAGA 44767 30 93.3 30 ............................TC AAGATAAAACTTATCGCGTAGCTGATCAAG 44707 30 93.3 30 ............................GC TTGAAACTCTAGCTAATGTTTGTGATTTTC 44647 30 96.7 30 .............................A TGATTCAACTGCGTCCAATAATGGGGATTA 44587 30 100.0 30 .............................. TAACAACAACTACAAGCGACTTATTCACTG 44527 30 96.7 31 .............................A ATTGGAGCAATACTGAAACCTATCTGACTGG 44466 30 96.7 30 .............................C ACATTAGTCAGCCTCCTTCGTAGTCCATCC 44406 30 100.0 30 .............................. ATATGAAATAAGTAAAATAACAGCGAGTAA 44346 30 96.7 30 ............................T. TAGCTAGAAAAATAGAAAATGCTTATAACT 44286 30 93.3 30 ............................TC GGGTTGAGCAATTTCTGTAGTGATTGGCTC 44226 30 96.7 30 ............................T. GTGAAAACTAGTGAGATCCTGCTTGCACAA 44166 30 96.7 30 ............................T. TAAAAAAGGAAATACACCCTTTAATCACAA 44106 30 93.3 30 ............................TC TCGGATATGCACCTATCTTTTTCATTGAGC 44046 30 93.3 30 ............................GA TTAGGGCAATGGCTGGCGATTCCACATGGG 43986 30 93.3 30 ............................TG AAAATAATGATTGGAGACAAACGCCCGATG 43926 30 96.7 30 ............................T. GTCGGCATGCACTATCACTTACACCGTGCT 43866 30 100.0 30 .............................. TGCGGTAATGCTCAAAGACGAGATCGACGC 43806 30 100.0 30 .............................. GTCAAAAGCCAAAGCAACTTTGTGCATTTG 43746 30 96.7 30 .............................G TGGTATGCAAATGAAGTTGATTCTTGGAGA 43686 30 100.0 31 .............................. AAAAGCCCCGATTAATTGGAAAGGGGGCGAA 43625 30 100.0 30 .............................. CAACTGGGGCAGCCTTGAGGACTGGAACAA 43565 30 96.7 30 ............................G. GCATTTAAACGTGATGCTTGCAGTTAGTTT 43505 30 96.7 30 ............................T. GCCAAGAATCCAAACGGCAAAGTTATTCCA 43445 30 96.7 30 .............................G CAATTCATGGTATGGGTTTTATTAGCGAAT 43385 30 96.7 30 .............C................ AAAGCAATATTGACCAATAAAAGTAAGCGT 43325 30 93.3 0 ............................TA | ========== ====== ====== ====== ============================== =============================== ================== 100 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : CACCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACGTGTTGTAACTTATATTTACTATAATTTTAT # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCATGATTGGCATTTGTTCTGTGTGTTCATGGCGTAATTTATTTTAAGAATTAATACGTGACATATAACTGTTGTTTTAAATTCATCGTATTATATGTCATTTAAAATACATCACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACCAACGTTTTTTTAGTGAAATTTTCATGCGCGGTTTATACCTCATCACCAATGATGATCCCATTCAACTTCTTTTAGAAAAGTTAGAGACTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGTGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //