Array 1 348151-345862 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBD02000003.1 Streptomyces xinghaiensis strain OlgR contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 348150 29 100.0 32 ............................. CTGCGTGGCGACCATGCCCGTACCGAGCCCGG 348089 29 100.0 32 ............................. CAGGCCAACTACGACGGCAACCGCGGGGACGA 348028 29 100.0 32 ............................. TTTAGGAATCGCCGTCCGCGAACGCGTCGAGC 347967 29 100.0 32 ............................. AGCAGACCGCCGAAGGCCTCGCCAACGTCTGG 347906 29 96.6 32 ............................A GAAGGGCAAACGGCTGCGCGCGGAGCCCATCG 347845 29 100.0 32 ............................. CGGGGCGGGTCAATATGTGTGCACAGATAGCG 347784 29 100.0 32 ............................. GCGGCGTACGTCGCGCTCGTGGCCTCGGCCGC 347723 29 100.0 32 ............................. CAAGCGGTACACCACGGTTCATGCACAGTTTC 347662 29 100.0 32 ............................. CCTTCGGCGGAGGCCTTGGAGCCGTCCGTGGC 347601 29 100.0 32 ............................. AGCCGGGCCGAGGCCGCGCGGGCCAACCGGGC 347540 29 100.0 32 ............................. GAGGCCATCAAATTCGGTGGCTATTCCTACAG 347479 29 100.0 32 ............................. TCGAAGATTCCGCCGTACCGTACGGCGATCAT 347418 29 100.0 32 ............................. ACGCGGACCAAGGCCCGCGCCCGGAAGAAGAA 347357 29 100.0 32 ............................. CCCTCCGCGTCGTCCTCGACAACGCCGACGAC 347296 29 100.0 32 ............................. GAAGTCTCGCCGCTGCTGCTGGACATGCTGGA AGCG [347282] 347231 29 100.0 32 ............................. CGAGGAAGCGAAGGGAGCGGCCGCCGTGGCGG 347170 29 100.0 32 ............................. GGCCGCCCGCCGGGCTGCGAAACGCGGCGGAC 347109 29 100.0 32 ............................. CACCTGTCGCGTCCAGTGACGGCCCGTCAGGC 347048 29 100.0 32 ............................. CAGAAACGTGTCGTGCTGGAGGCTCTGGCCCG 346987 29 100.0 31 ............................. ACCCGCATGGCCGCGGAGATTCCGGCCTGGC 346927 29 100.0 32 ............................. TGGCTGCGGCCGCGCGCCTGGTGCCCGACGTG 346866 29 100.0 32 ............................. GTACTGCCGGGCCTGCTCGGACATGGGCTCCG 346805 29 100.0 32 ............................. TCGCCGTGCCGTGCCCGACCTGCCGACCCGCC 346744 29 100.0 32 ............................. TCCTCCGGCAAGGACGCGCAGCGCAACCCGAC 346683 29 100.0 32 ............................. CCAGCCGATCGCCTCATCCTGACCGGCGATCC 346622 29 100.0 32 ............................. TAGGTGACGATCTGGGACACGCGCCCGGCGCT 346561 29 100.0 32 ............................. CAGGCGAGAGTCTGCACGCCGGTGATGGCCCA 346500 29 100.0 32 ............................. AGCACGGAGCCCGGTGGGCAGGTGGCGCGGCG 346439 29 100.0 32 ............................. ACGGGTGCCCTGTCCCGCTCCTACATCGTGGA 346378 29 100.0 32 ............................. CTCACCGTCTCCGACGCGACGGCCGAGACCAT 346317 29 100.0 32 ............................. CTCCTCGCGGTGAGCGCGGCGGACTGTGTGGA 346256 29 96.6 33 ............................A GTGAGGGGGGTCGAGTTCTTGCCGGACGCGGCG 346194 29 100.0 32 ............................. CATTGGGACACGATCGTTGCGAAGACGCGGGC 346133 29 96.6 32 .......................A..... GACGGTTACTCGATCGCGCTGCAGATGCTCGC 346072 28 96.6 32 ......-...................... AGCGAGACGTAGCTGCGGCCGGTCACTGCGGT 346012 29 100.0 32 ............................. TTCGCGGACCGTCTCCGCGGCCTCCACGTCTA 345951 29 96.6 32 ................T............ ATCGTCTCGCCTGATCACGTTCGCCGTGCCAT 345890 29 89.7 0 ..........T...........C..T... | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.3 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCCGCGCATCGTCGCCGACATCCAGCAACTGCTCGACCCGGACACCGAGTACGAGGTCCCGGACCCGGAGGAACAACTGGTCGACCTGTGGGACCCGGTAGCCGGCGCGATCCCCGGCGGGGTCAACCACGGAGTGGAGTCGTGACCGCGCCCACGAAGGGACACGACCCATGTCCTCAATGATCGTCATCTCCGCCACGGCGATCCCCGACCACCTCCGCGGTGCCCTGAGCCGCTGGCTGCTGGAGGTAACACCGGAGCTGTACGTGGGCACGGTCTCGGCCCGTGTCCGCGACGAACTCTGGACCTCGGTCGCCGCCTGCGCCGGAGACGGCATGGCCGTCCTCGCTCACCCCGACGACAACGAGCAGGGCTTCACCCTCCGCACGGCCGGCACCCGCCGCCGGGAACCGATGGACTTCGACGGCTTGACCCTGATCGCCTTCCGCAGAGAGAGTCAAGAAATGGCAAACCGCTTCTGAAAGCGCAGGTCGGGAAGT # Right flank : GTGAACCGAGTGTCCAACGCTCGGGCATTGGACGGGTTCCGGTCGGCTGTGGTGTTCCTGTCGAAACAGGAACACCACAGCCACCGTGCCGTCAGTTGTCAGGATCTGCCTCCAAGCCAGCCAGCGCCACGTCGATGAGGTGGTTGGAGCTCTGCTGGGCGCCCCGTAGGACCTTGGCGTAGAAGCGGTAGAGGACGGCGAGGCTGTGCCCGGCGCGGCGGGCTACTTCGACCGGGTCCACTCCGGCCTTGAGCCACAGGGAGATGCCCGCGTGGCGGAGGGAGTAGGGGACGTCTGCGAGGGATGTTCTGGCCTCCTCGGGGCTCAATGCCTTCTCGCGGGCCTTCTCCCACAGTTCGCAGTATTCGGTGGAGCGGACCCGGCCGCCGCGGACCGCGCGGAAGAGGCGGCCGTCCGGGGCGGTGCCGTGGGTGGCCAGATGGGTGCGCAGCATGCCGACGAGAACGGGCGGGATCGGGACGGGGCGGGTCGCCTTGCGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 357888-359747 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBD02000003.1 Streptomyces xinghaiensis strain OlgR contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 357888 29 100.0 32 ............................. TACTGGGCGCTGCAGGGGCGGGTGGAGCCGCT 357949 29 100.0 32 ............................. GTCGGCGAGGCCGTCGGGGAGATCGCCCCCTG 358010 29 100.0 32 ............................. CGAGAGGGGATGACGATCATCCGCGCCTTCGC 358071 29 100.0 32 ............................. CGGCACGGCGGGATCGGTTGACCGGAGGCGTC 358132 29 100.0 32 ............................. GCCGAGCCCCACCAGGACGATGCCACCGCCGA 358193 29 96.6 32 ............................C CGTCCACGAACTGCGCCGAGTTGAACACCCGG 358254 29 100.0 32 ............................. CAGATCGCACGAAAGCTGCGCAGCTACCTGAG 358315 29 100.0 32 ............................. GCCGAGCCCCACCAGGACGATGCCACCGCCGA 358376 29 96.6 32 ............................C CGTCCACGAACTGCGCCGAGTTGAACACCCGG 358437 29 100.0 32 ............................. CAGATCGCACGAAAGCTGCGCAGCTACCTGAG 358498 29 100.0 32 ............................. GACCCGGTGACGGGGCGGTCGGTGTGGTGGCC 358559 29 100.0 32 ............................. CTCCGCTGCCAGTTCGCGGTGCGCACGTCCAT 358620 29 100.0 32 ............................. GCCCCGACGGGCGGGGCGGGGTGCGGGTGGTG 358681 29 100.0 32 ............................. CCCAACCTCCGCCCCGTCGGCGGCAAGGGCCA 358742 29 100.0 32 ............................. TAGGTGGCCACATGCCGGTGCCCCGTGATCGT 358803 29 100.0 32 ............................. GATGCGGAGCCGAATGGGTGCAGGACTACTAC 358864 29 100.0 32 ............................. GCGATGTGGTCCAACGTCCTCGGCTACTACGC 358925 29 100.0 32 ............................. CCTTCGCGGATCATGGTGTCCCTTTCGGTGTG 358986 29 96.6 32 C............................ CGGGTGCCGTCGCAGCGTGAGGCGGGTGCGGC 359047 29 100.0 32 ............................. CGGATACGCCTCCTGGCTCAACGGCACGATCC 359108 29 100.0 32 ............................. CACGACGCCGCCTGACCGCCAGAGAGGACACC 359169 29 100.0 32 ............................. GCTGGCCCGCCAAGACCAGCCGCGACACCGAC 359230 29 100.0 32 ............................. TTGTACATGGTGGTGAGCTTGTGGGTTCCGCT 359291 29 100.0 32 ............................. TCACGTACGGGGACCTCGGTACGTGACCCGGT 359352 29 100.0 32 ............................. TTGTTGTCCCAGGGTGTGTAGTCGTAGCCCTG 359413 29 100.0 32 ............................. CCGTGGAAATGGACCCGGATACGGACGAGGTC 359474 29 100.0 32 ............................. TTGGCCGCCCCGGGCGTATCGGGGCGGCCACC 359535 29 100.0 32 ............................. CCGGCGTTCTCTTACCGTGACTGGCGAGGAAA 359596 29 100.0 32 ............................. ATCACCCGCCACGGCGGGCCGACCATCGCCGG 359657 29 100.0 32 ............................. GCCGCCGCCAAGGCGCTCGACGACGCCGCCGC 359718 29 100.0 0 ............................. | A [359724] ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.7 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCTCTCGGCACCCGGCGCTCGCAGATAGACCGGCTCGTCACGCACGGCCGCGAACGCCGCCGGCACCTGGGCCTGGAACGGCGGCGTGATCTTGCCCAGGTCATGCAGCCCGGCCCAGAACGACAGGACTACCCGCGCTTCTCTCACGGGCAAGCCCAAAGCATCAGCCAGGCGCTGTCGCATACGCTCGCCGAGTAAGCCGTCCCAGAGCGCGGAGAACACAGCGGCAGTGTCGAGCAGGTGACACACCACCGGGTACGGCCGCGATAAGCCCTTCTCCTTCCCCCACATACGGGGGTCCAGGAGAGGTGTCCCGTCGGCCGGGGGCTCACTGTTCATCATGCGCCAGGGGTACCAGTCGGCACTGACAACGCCCAGCACGCCCATACACTGATCTGTCATGACCTCACCTCACAGCGCCGATTTCGCTCGGGCCGCGCTGCGACTGCACAAGGGCAAAGTAATTGCAAAGGCGCTCTAGAAGGCCAGGTCAGGAAGT # Right flank : GGTCGAGCGGGGCACCTCGCACGGCTCGGATGTCGACAACGCCTCAAATTGTGCCGCCTCCAACGGATGAAAAGTGGCCCGTCTGAACGGTCTGGCTCGTTGAGTCAGGCAGGGAGGAAGGGTGATCAGCGTGGAGGACTGGGCGGAGATCCGCCGGTTGCATCGGTCTGAGGGCATGCCGATCAGGGCGATCGCTCGGAAGCTCGGGATCTCGCGGACGACCGTGCGGCGGGCGGTGGCCAGCGACCGGCCGCCGAAGTATGAGCGGGCCCCGAAAGGGTCGATCGTGGATGAGGTCGAGCCGAGGATCAGGGAACTGCTGGAGGTCTGGCCGGACATGCCGGCGACGGTGGTGGCGGAGCGGATCGGCTGGCAGCGGGGGATGACGGTGCTGCGGGACCGGCTGCGGGACCTGCGCCGGGATTACGTTCCGGCGGACCCTGCGTCCAGGACGGCCTATGAGCCGGGTGAGCTGGTGCAGTGTGATCTGTGGTTCCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 361989-362505 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBD02000003.1 Streptomyces xinghaiensis strain OlgR contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 361989 29 100.0 32 ............................. GTGGCGCAGACCGTGCTCGGGCACGAGCGGGG 362050 29 100.0 32 ............................. GAACAACTCCTCCTCAAGTTCGTCCAACGCCT 362111 29 96.6 32 ...........................T. GCCTGGTCAGAGAGGTGGTGGGGTCGTTGAAG 362172 29 100.0 32 ............................. GCGTATCAGCGCGCATCCGGGCAGTGGGTCAA 362233 29 100.0 32 ............................. CCCCGCCCTGCCCGGAGGGGAATCCGGGAGGA 362294 29 100.0 32 ............................. CTCGGACCGGCGGACGGCCTGACGGGCCCGCT 362355 29 100.0 32 ............................. TGGACGCGGTACGAACTCAAGAACGTTGCTGA 362416 29 100.0 32 ............................. TGCTCGGTGCTGCGCACATCGCAGTTCCCGAA 362477 29 89.7 0 .............A...........A..A | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCCACGGGCCTGGGCATCCGGGCCTGCCAGGCCGGTCACCGAGTCGCGTTCGCAACCGCCGCCGAGTGGGTCACCCGCCTGGCGAAGGCCCACGAGACCGGCCGCCTGGACGAGGAACTGGTCCGGCTCGGCCGGATCCCGCTCATCATCGTCGACGAGGTCGGCTACATCCCCTTCGAGCCCGAGGCCGCGAACCTGTTCTTTCAGTTCATCTCGGGCCGCTACGAGCGGGCCTCGGTGATCGTGACCAGCAATAAGCCCTTCGGCCGCTGGGGCGAGGTCTTCGGCGACGATACCGTCGCCGCCGCCATGATCGACCGCCTCGTCCACCACGCCGAAGTCATCTCCCTCAAGGGAGACAGCTACCGCATGCGCGGCCGCGACCTCGGACGGGTTCCCGCCGCCAACACCAGGGAATGACCAACATCAACTGACTACGGGTCCACTTTTCATCCGCTGCCTCCGGTCCACGATTGCGCCGTTACCGACACTCGGACAG # Right flank : ACTGCGGAATGGCAAGCAGTCGTTCTGGGCCTTCCAGATGCTCCAGAAGTTCACAGCTGGACCGAACCCCGTCCGCAGTCGGTCCGTGGATGGTCCGTGGACGGTGATCAACCGGGGAACAGAGTGAGACAGGGTGAGACAGCGAGCCGCAGGACGCGGCTCGCAAATCGGCCCGGAACCCCGTTCCACCTGCGGTTTGTGTGAGCTGAGGAAACTGCTCGATTCGTGCGGTCGGGGGCCATTTCAGGACACTTCGGCTTTCAAGACCGTTCCCTTAGGCCGCTCGGGCAACCCTCCCTCGCCCCCGCCCACCTGCGGCGGAAGCGCCTACAGCCTACCTGGCGGGCCCAGCCGTAGGGCTCTTGGTCCGTCCCTCGGCCGTGACCTCGGAGACCGTGCTTCCGGCCGCTCGGCGCCGCGGGCAGGCGTCCCCATGCTAAGCGGCACGATCGCTTCTCTGTGGGGCAGTTGAGGAAGCGGCACGTCTTGCTCAGGTGGAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //