Array 1 18509-12552 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000010.1 Nostoc sp. FACHB-133 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 18508 37 100.0 34 ..................................... ATAAAAAGCAACTTGAACTCTAATCCAAGATCCA 18437 37 100.0 33 ..................................... TGATTAAAGATTGTTGTCTAGCGCCAAATACTT 18367 37 100.0 36 ..................................... AGGCGATCCGTCTCCGCACCGAGAAAATCTTGAAAG 18294 37 100.0 36 ..................................... AATCATGGATCAATTTCAAAAACAAGTCAAAGTAAT 18221 37 100.0 34 ..................................... AAAAATTCTGGCAGCAGTAATCTATATTGTTCAG 18150 37 100.0 37 ..................................... AGTATTTTCTTTCTATCCCAATATGCGGGATGGCGAT 18076 37 100.0 37 ..................................... GGAACCCTTCTGATTCCGCGTACTCTTTGATTGTAAC 18002 37 100.0 33 ..................................... CTCTACCTTTCGCGGCAGATTTACCACCGACGT 17932 37 100.0 35 ..................................... TTTGATAAGAAGCCAAATGAAGAAGTGCGATCGCT 17860 37 100.0 39 ..................................... ACAACCAATTAAACCAATATCTATGAGAGGCTAACGCCT 17784 37 100.0 38 ..................................... GAGACTATTACCACTCTGCTTAACATCATCAATCCATA 17709 37 100.0 34 ..................................... AACCTAGTAAGGAACAGCAGCCAAGTCTACAAAG 17638 37 100.0 39 ..................................... ACTGATCAGCCGAATGCCTGTAGTAGCTGTTAATACCTC 17562 37 100.0 35 ..................................... AGCGTTAAGGATGGGATTCTACCAGTGATTGAGAA 17490 37 100.0 36 ..................................... AAAATCTACCTTAACTCCTCCGACATCCAAGGCCAT 17417 37 100.0 38 ..................................... CCAAGGACATAAGTGTGATTCTTGCCAGCGCCTTATAC 17342 37 100.0 35 ..................................... ATATCTAAAAACCGTAACTTCAATCTATTAGCCAA 17270 37 100.0 34 ..................................... GCCAGGTAAAGAATCCAGTAATTTAGCTGAATCA 17199 37 100.0 35 ..................................... ACTTATGAGAACACCGATAATAAGGATTTGCAAGA 17127 37 100.0 35 ..................................... TTACCAAACTGGGATAATTCTGCACCAATTGGATT 17055 37 100.0 36 ..................................... TCAACAAATCCTTTGTCTTCCAAAACTCCTATAGAC 16982 37 100.0 32 ..................................... ATCCTCAGAGTAATCTTGGACAAATGCAATTT 16913 37 100.0 35 ..................................... TTGCAAAGTTGCTCTACTTGGGGAAACCCCAAGAC 16841 37 100.0 34 ..................................... GATTCTACAAAAGCATAACCATTACCAACTAAGA 16770 37 100.0 33 ..................................... CCGTTAACCCTAACTACACAGCCATAATGCTTT 16700 37 100.0 34 ..................................... AGATACTCCCGGCAGTCGTGCTTTGTTTACTGGA 16629 37 100.0 31 ..................................... AACTAAGAACCACTGACGGATATTTTCAAGA 16561 37 100.0 34 ..................................... AAAGCATTGATTTTTCGTGATATTTTTGCTTTAG 16490 37 100.0 35 ..................................... GTATCATCCCAATTTTTTGCCGACTTAGCGCACTC 16418 37 100.0 38 ..................................... TTTGATTCTTTGTAAATTCTCAAGTGCATTACATTGGA 16343 37 100.0 37 ..................................... CTCAAGGCTTGAAAAGCAGAAAGATTATGCGGTTGAA 16269 37 100.0 32 ..................................... TCCAATGCATACGTGGTCGTCTTAACTGCGAA 16200 37 100.0 35 ..................................... GAGGTCGGTACTCCGATTGCCGCTCTCAAACAGTA 16128 37 100.0 35 ..................................... AAAGAGAGAGCAAAGCAAGAAAGAATTTCTCTCAA 16056 37 100.0 34 ..................................... CTAGTGTTATTCATGGTGCTGGGTTGAATTTAGA 15985 37 100.0 33 ..................................... GTGAAGATGACAGAAGTCCACCTACCCGGTGGA 15915 37 100.0 34 ..................................... ACTTCTAAATAAAGGACTGTAAAAAATGGCTGGC 15844 37 100.0 36 ..................................... AACGGATGCACTCGGATTATTTTCTGCCCCAACAGA 15771 37 100.0 35 ..................................... GTGACAATTTGAAACGCTTGCCAAGCCTAGCTCGG 15699 37 100.0 34 ..................................... TTTCTTTTTATCGACAGGGAGTTTTAATACTCCT 15628 37 100.0 39 ..................................... AAGGGGGGAGAGTGGAGACAAGGCGCTTGTAGGAATGGA 15552 37 100.0 35 ..................................... GAGGACTTTAAAAATATTTCTAAATATTGGCAGAA 15480 37 100.0 37 ..................................... TAACCTTGCTCAATGGTTAAACCGGAATAGGCAGAAG 15406 37 100.0 36 ..................................... CCACCTGGGCAGCCGATAGATGACATATCGCCTCCG 15333 37 100.0 36 ..................................... TACGAAAAATTGGGATGATACCACCTCTATAGGTCG 15260 37 100.0 36 ..................................... CACATAAAATCCATGCACTGAATATTGCGCTTGCAG 15187 37 100.0 37 ..................................... TCACCTTCAACAGGATTGTACTTCTTCCATGCTGCAA 15113 37 100.0 40 ..................................... GTGAAATTGAGACTGCTTTGAGTGAGTTCTGGTGCATTGC 15036 37 100.0 34 ..................................... ATGTTGTGGGTAGTGTTGTGCGATGCTCTTAGAT 14965 37 100.0 32 ..................................... GTATTAGAAGCCCGCGTAAAATTCTATGTCAG 14896 37 100.0 35 ..................................... GCTGTGCATCCTCCTCTAGAAGCGACTCAAGTAAA 14824 37 100.0 34 ..................................... AAACAAAAGCAGCGATCGCAGCGAAGACAACCAG 14753 37 100.0 37 ..................................... AGCTAACTCCAACTTGTTGAAGTTTAGCGGCGGCTGA 14679 37 100.0 32 ..................................... CTAGTTTTCAACTTGCCCTTGGTGGTAGATTT 14610 37 100.0 37 ..................................... GCATCAGCAGCATCCTTTGCAGCAACCGCCGCCTTTG 14536 37 100.0 34 ..................................... CTGGGGTGACCAATGCAGGATGCAAAGCCATAAC 14465 37 100.0 35 ..................................... AATGGGGTTGTCATTTTCGTTGCCTTGCCCAAGTG 14393 37 100.0 35 ..................................... GCGGATCTTCATTTGGTTGCTCAAATCGTCTAGAT 14321 37 100.0 33 ..................................... GGAGCAACTAATACTCTTCTCTGCAAAATTATT 14251 37 100.0 41 ..................................... TTACTAGCATCTGAGCAAGCTGATGCTGCTGCGCCTGCTGA 14173 37 100.0 34 ..................................... AAAACTTGGGGCAATCCTTACGTCATTTAGTGCC 14102 37 100.0 35 ..................................... CCTGGCTTTTCTGCGCCGAAAGCGCGAAAAGTTTT 14030 37 100.0 36 ..................................... GCCCCAAGTAGCAGCACTTGAGAAAGTGCTAGTAAT 13957 37 100.0 35 ..................................... ATCAGTAAACACTGATTTTATCAATTAAACAAAGA 13885 37 100.0 36 ..................................... GGCAAGGGGTCTTTAGCTGGTGATAAGGATTTTCAA 13812 37 100.0 33 ..................................... TATAGGAGGCTCAGTAGATGGATTATTTGCAGG 13742 37 100.0 35 ..................................... CTTTGGTAAACTCAGCGATGTTCTTACGGGTCAGA 13670 37 100.0 34 ..................................... AGAACGTCGCCTAGGGTCAGCCCTGGATAACTTT 13599 37 100.0 37 ..................................... AGTTAGGGGAAACCTTACTCGTTGGTTTTGTGGACGG 13525 37 100.0 34 ..................................... GTAAGCTTTGAGTCTTGCCGTGAGCTTGATACAA 13454 37 100.0 37 ..................................... ATTCAAAAGACTTTACCCAGAATATCTGAATCACAGA 13380 37 100.0 38 ..................................... GATGGAAAAAGAAACTTTTACCCCACCTGGGATGAAGC 13305 37 100.0 32 ..................................... AACGCTAGGAGCGCAAGTGTTGACCCTATCTG 13236 37 100.0 39 ..................................... AATGCCTTGCTGATTGATGCCGGATTTACTACTCAAGAG 13160 37 100.0 38 ..................................... ATAGTTTACACAAAATTTATAATTCATAAAACTATTGA 13085 37 100.0 34 ..................................... CCAGTGGGAGCGATTATCAAATTCTCTACGATCG 13014 37 100.0 33 ..................................... GAGTAATTGAATTTTTATCAAGTTGTTCCGCGA 12944 37 100.0 34 ..................................... CAAACTCCCCTATCTCTTTTCTTACTTTTTGTGA 12873 37 100.0 35 ..................................... ATTTGGTAGGTTGTAGTGAGTAAATGCGTAAGCGA 12801 37 97.3 34 ...........................A......... ATCGGGGCAATCTCTTATGATGCCACTGGCACAA 12730 37 100.0 34 ..................................... GCCGTAGCAAACCAACAATATTGAGAACAGCTGA 12659 37 100.0 34 ..................................... CTAGGATATTAAGCCTACGTAGCATAGCCTCATT 12588 37 89.2 0 .................................TTGT | ========== ====== ====== ====== ===================================== ========================================= ================== 83 37 99.8 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : AAGAGGGTGTGGTGCATTATGGCGTACCTAATATGCCAGGAGCAGTACCTTGGACAGCAACTCAGGCACTCAATAATAGTACATTACCTTATATCGTCCAGTTGGCGAATTTGGGAATTATGGCGCTAGAAGTTAACCCAGCCTTGGCAAAGGGTGTGAATGTGCAGAATCATCGCTTAGTGCATCCGGCTGTACAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGGATTAGGCGATCGGGAATCAGACTAATTTTCTTGCCTTATGCGCGGATGGGTAGGTGTACAAAAGGAGAAGGAGCAAAAAATGGCTACTGCTCCATCTATACAATGCTTTCAGGTCACTAGTATTTTTAAACCATCCGCGCACCTTATGGAGACTGGCTTTCAGCGATTTGCATCTTGTGCTATGACTATTTGCTGTGTTATGATTCACACATTCGCGCAACTGCACCTTGAAAATCAAATACAGCAGCGCTTTCAGAAGCCAGCG # Right flank : GAAAAATACCTCTGTTTTAGTACCAGCTTATTATCTGGTTTTTGAAAGTTAATCAAATTAATAATGCATATCAAAGTTAAACAAATGGCAATAAATATTTTTAAAAATTTTAAAAGTCGATTAACCTTGATCACTTGAATGGATTGATAAATTTCTGCCTTTGTAATATAGATTCTCTAGCCCCTGTCAACTTCTGCGGAAAAGGAGCTTTAAAGCTGACATGAATCGGCCATATCAGCCCTAAATCATAGCTCCTCAACTTATTGGAGAAGTCGGATAGATGTACATTAGTGTCACCTTATGTTTTTTATGCCAACTTTGACCTCTTGTCTTTTGACATATATTACTGATTCACTCACAATTTAGAAAACTTTCCCTATCTATAGAGAGATGCTTTCCTCTCTAATAAAGTTTAATAAAGAGAAAATCTACGAAATTAGTCTTTCCATTTTACTATGATAATGAAGTTTTTGGAAACTGCGATCGCTAGAATATTATTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 342617-342218 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000002.1 Nostoc sp. FACHB-133 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 342616 37 100.0 33 ..................................... AGATGAACCCAGGAATTATGCCGTATTCTATGG 342546 37 100.0 35 ..................................... AAAACCACCGCGATTTTAGCATGATTACTTTAGAA 342474 37 100.0 38 ..................................... ATGGGTTTAAGCTACCGTCAAATCAAAGAATTAGTGAG 342399 37 100.0 35 ..................................... AACCTTAACTGGGTTGGTTTGTGGATTAAAGAATT 342327 37 100.0 36 ..................................... GGAATTGTAAATCCATCTTTTACCATCTGTGGTTAG 342254 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 100.0 36 GTTTCAACAACCATCCCGGCTAGGGGTGGGTTGAAAG # Left flank : TTGAGGTGCTTTAGTTGAAATACTGAACCTTGAAAATATAATATAGAGATAATAGCGCCGCAGTTCATGCTCTTTAGAGCCAATGTGCTGTGAAAAATCTAGGTTAGTTTGACGGTTGTCAGACCGTTTTGCTTTCTGGCCCTGGTAGCTGCCCGCTTCTGATGCTGCTGTCGCAAGACAGGATAGGTGCGCTCCCTGCAATAAGAAGTAAGGCTTATTAAGCCCTAACCGTTCTAGCAACGGTGCGGATTACCGCAGTGGTGGCTACTGAATCACCCCCTTCGTCGGGGGAACCCTCCAAATATTTTTTTGGCGTGTCGAAGCGGGGGCAAAATCCCTAGAGTCCCGCCAAAACTTTAAAACCCTTATCCAGTCTTGACTTAATAAACTAGCATGTGAATGCATTTAGTTTTTAAATTTTCAGTTCGAGACTCTTTTAAGCAGACCTGCCAATTTATGTGTATGGAAAGCTTTTATAACAAGGGTTATAGACGGGTAGA # Right flank : CTGATTACGTTCGGATTCACGAATTTTTGATAGAGGTTTCAACAAGATAGTTAGTTTGTACAGTGCGTAAGCCCTAGTATTGTTGAATTTTTATTTAAATTGCAAGCTTTTTGGGAGGGTTGAAAGGCGCACTTCGTTCGGGATTATCCTGAATGTTTGCAGATATATTGGAATTATGGTGAGCTTATAATTGAGCCTCCCACTCCACTTAAAGAAAGTCAGCTATATTTAAATCCATAGGAAAGCAGTTGACAAATAATTTGTCGCTATATGAATTTTGACAAATAATGTGTCGTTACGGACAAATAATTTGTCGCTCTACAGTACAAATCGGGATGACTGGATTCGAACCAGCGGCCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCCACATCCCGCCATAAAAATGTCATTGTAAATTAAGAATATCACAACCCGTGCTAAATGACAGAATTACATCTATATATATGAATATATGATCGCTTCACCCAAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACAACCATCCCGGCTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 142776-145382 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000003.1 Nostoc sp. FACHB-133 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 142776 37 100.0 34 ..................................... TTGGATCATATTTCCCGTGAGACGGAAGCTGGAA 142847 37 100.0 35 ..................................... GCCACATCAAGCGCTTTGAAGATGTGGCAGGGCAA 142919 37 100.0 35 ..................................... AGGAAAAACCCTACGACGTTGTTGGTTATGTCGCC 142991 37 100.0 34 ..................................... GTGGCTGGATAGTTTTAGCTAGCCCAAGCAATAA 143062 37 100.0 34 ..................................... CAAGCCCTTGCTTACCGTCGTTGTATTTAATCTT 143133 37 100.0 34 ..................................... TACATTTGAGCGATTATTGAATCCGGCAACATAA 143204 37 100.0 35 ..................................... CATAAATCTACTATCCCACTAGTAAACGCAATTCC 143276 37 100.0 35 ..................................... CTCAGGGGTAAACAGGGACTCTAGTTCTTCCTTGA 143348 37 100.0 36 ..................................... ATGCAGTGAGTTAATGATTGCTGCTAGGGTGGCAGC 143421 37 100.0 33 ..................................... GTGCGTATGCCGCCCGCATACTCAACCAAGCAA 143491 37 100.0 35 ..................................... TAGCTCCTGGCGCACTTCCGGCGGGTAAGTTGCTC 143563 37 100.0 35 ..................................... TCGGATAATCGGGTAGTAGCCATAGAAACAGCAAC 143635 37 100.0 34 ..................................... TTATGCCAGACCACCCCCGACACGGTGCTTTCAT 143706 37 100.0 35 ..................................... GAAAAGTTTGGAGACATTAACGGTGAAAGAACAAC 143778 37 100.0 33 ..................................... CTACTATATCTTTTTTTCGTGACTCCTGAAACA 143848 37 100.0 35 ..................................... ATAGTGATTTAATTTGGTGTAAATGTGCCGTAGAG 143920 37 100.0 33 ..................................... AACGCTAGCCCAATACCTCGCCTATACCATCGG 143990 37 100.0 32 ..................................... TTGATAAAATCCTTCTGGGCGGAAGTAAAAAA 144059 37 100.0 35 ..................................... CATTAAAAGGATCGCTAGGCGACTCTTAGGAAGGC 144131 37 100.0 33 ..................................... TAAATTTAATCCGTATTCGGATGAACAAGTTAA 144201 37 100.0 33 ..................................... TTCTAGAAAAAAACTTGAGAAGATGACTAAAAA 144271 37 100.0 33 ..................................... TTTATTGTCTTGGGCAAACACTAATACTACAGA 144341 37 100.0 35 ..................................... TTGTCAATGCTTTTCTTCTTTCTTCTAACCATATT 144413 37 100.0 32 ..................................... TGGTTGTATACACTAGGAAATACTACATAGTA 144482 37 100.0 34 ..................................... AGTACACTCAAGCAAAAGGAACAATGGCAAAGAA 144553 37 100.0 36 ..................................... AGAGATATCCCACGATTAGTATTTGGATTGAGTAAA 144626 37 100.0 34 ..................................... GAGAAACAGTAGCGATCGCACTGGTGACGCTATT 144697 37 100.0 34 ..................................... CCTTTTTTAATAGCAACTGCATCAAGTTCTACTC 144768 37 100.0 33 ..................................... AGTACTAATGCTTTTGCTTCCCAAGAAATTCAA 144838 37 100.0 34 ..................................... GGGAAACACTTAAAGATAAAATAGTTCAACTCGA 144909 37 100.0 36 ..................................... TCCTAGAGCCGAATGGTTTGTGCATAAAAACATGAA 144982 37 100.0 35 ..................................... TGGTGAAAAGAGTTTAAATCTAATTGCAGACTCAG 145054 37 100.0 35 ..................................... TTGAGTGTGGGGAGGGCGATCGCTACAAAAGCAAA 145126 37 100.0 37 ..................................... ACAAACTTTGGCTCCCACTTAATCACTTTTCTCTGGA 145200 37 100.0 36 ..................................... TACCAAAATCCGACGCAACAGGTACTAAGGCAGACG 145273 37 100.0 36 ..................................... TAGTAGGTACAATCGGCGTTGCCTGAAATGGTTTTT 145346 37 81.1 0 ..................T.........C.GG.TT.G | ========== ====== ====== ====== ===================================== ===================================== ================== 37 37 99.5 34 ATTGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Left flank : AAGCAGAACTCAATCAAGTTTCTGCAACTCCTACCCTTGTCAAAGTTTGGCCGCACCCAATTCGGCGAATCGTTGGAGAGTTGGATCATGTAGAAAAGATTTTACAGATGTTAGCTGCTAAGGAAAAAATTTAAGTTTTATAACGGAATTGAGCGTTAAAAGTAAAATGCAGAGATTTGAGAGGTGGCAATTGTTTTTGCTAGAAATCAAAGAAAGTCTGTAGTAAGCTCATGGCTCGTGAACCGCTTTGCAATCAGACTAGTTTTTTTGTCAAGTGCGCGAATGGGTAGGTGTTGGTGAAGAGGTGACTACAAACATGGCTGAATTGCGTGTATGCAAAGACTTGACGACTGTAGAATCTTGAAGACATCCGCGCACCTTATGTGGACTGACTTTCAGCGATTTTCGTATGACACATTGCCACTCTTCATGTTATGATTTTTTTGTCCGCGCTCTTGAACCTTGAAAACCAAATAACACAAAGCTTTCAAATGCCAGCG # Right flank : GCGCGTCTCAAACCCTATTGACAGGCGGATAATATTACGTAATTAGAGTTTGAGACAGCAGAGGCCAACACAGAACACTTGTCAAATGGAACACATTGCAATAGTTGTTAATATAATTAAAATAATTAGTAACAGTACCTAAATTTATATCTAGCTTGAAAAGATAAAATAAGTGTTATAGGATAGCAACAAAACTTTTTATACCATTATTGTGGACTATTGCTTGTAAGTGTATTGCAAATAAGTCAACATGAAAACCGACTATTACGGCATAGGAAAAATAAAGCTACCATTAAAAATGTTAAAAAAGCTGAGAATGTTAAGTCTTCTCACTTCCACGAAGTGGTACTAAGCTTTTGTTTTATCAAAACAGAATTCAGGAGTCAGAATACCCTTTCAGGGAAGCAAGCTACAGAATGAATGCTGTACAACTGGTGGATAACACAGAGTTAGCAAGTCCCTTACTAATTGATTGTGACCGGAGTTGCGGAGTCCCCGGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 305027-306436 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000003.1 Nostoc sp. FACHB-133 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 305027 37 100.0 32 ..................................... GTGGCCCCACAGTACTGCCGCTCAATCTCCCA 305096 37 100.0 34 ..................................... AGCCGGAGTGTTGGCTTGTATTGAAGCGTAAAAC 305167 37 100.0 35 ..................................... AGCTATGTTGGGAACCTTTAATATTATATCTTTGC 305239 37 100.0 33 ..................................... TCTGCTTTGGCTATTTCAAAATTAAGGGATAAA 305309 37 100.0 35 ..................................... CTAGTACTTCTACTCCTGTTGTTGCTGAGATATTG 305381 37 100.0 34 ..................................... CTTTTCCGTATCTGTAATCAAAGTTGTCGTAGGG 305452 37 100.0 34 ..................................... TTGGAATTCAAAACCCAAGCTTATGAATCTGCCA 305523 37 100.0 36 ..................................... CTGATTTCTTCCTTTCAATTTGTTGATGCCGTATTT 305596 37 100.0 36 ..................................... ACTACGCCGCGACCGAACACGCTGGGGTGCATATTG 305669 37 100.0 36 ..................................... CAAAGTTTCTCCGAGAAGCAGCAGCGCTGGATTACC 305742 37 100.0 38 ..................................... TTGATGCCGTACAGGGTACTATGCAAACCTTTGGTAAT 305817 37 100.0 36 ..................................... ATGCTTATATGTTAGGTTGCCCTTAGCATTCCAGAG 305890 37 100.0 35 ..................................... AGCGTTTAGTGGCGGTAAAGACTCCACAGCATTAA 305962 37 100.0 42 ..................................... TTAACCCACTGTCAACCCTATTCTATTGGTGCGCCTCCAATG 306041 37 100.0 34 ..................................... CAGTCCTATGGAAACCCCTAATGAATATTTGTGA 306112 37 100.0 34 ..................................... ATCTTTCAAGCCAAAGGAGGATAACTGACCTTGA 306183 37 100.0 35 ..................................... AGCTACAGCTTTTTTACTGGCAGTTAATAGGATTT 306255 37 100.0 38 ..................................... CGTTACGACGGATGGCTTTGGAACTCAGGCGATCGCAG 306330 37 100.0 34 ..................................... TGAACTCAAGCATCAGATTATTAAGCCTTAGTGC 306401 36 94.6 0 .............................-......T | ========== ====== ====== ====== ===================================== ========================================== ================== 20 37 99.7 35 ATTGCAATTCATTAAAATCCCTATCAGGGATTGAAAC # Left flank : TTCTGTTCTCAAGTCTTATGGACAATGGATGCAACTGAGTGTGTTTGAGTGCAATATCACTTCTACTCAGTATGCTAAACTGCGATCGCGTTTAGCCAAATTGATTAAATCCGATACCGATAGTGTGCGCTTTTATTTTCTCTGTGGCTGTTGTCAAGCAAAAGTCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCCCCTTCTAGCTAGGTTTCTGTATTTCAAATGCGCGGATGGGTAGGTGTACAAATTCCACAGGTCTAAAAAAGTGCTTCTATCCCAAGTACAGTAAGGCTTTCAACCTATTAGTCGCTTAATCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAATACGATTTCAGCCTTTAAATTTTCTTGGCGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAATCGCGCAACCGTACCTTGAAAACTAAATACAGCTTGGCTTTCAGCCTCCCGCC # Right flank : TCGTTGGCCCCTGCCTCCTTTAATTTAACTTACCGATATAGCCAAACACGTAAGAGTGAAAGCAGTTGTTCAGTATCTACGGGTTTGGTGATGTAGTCTGATGCACCCGCTTCAATACACTTCTCGCGATCGCCTTGCATGGCTTTAGCTGTCAGTGCAATAATCGGCAAAGATTTAAATTGCTCGTTTTGGCGGATTAAGCTTGTTGTTTCGTAACCGTCCATTTCTGGCATCATTACATCCATCAAAACGACATCAATATCTGGTGTATTTTCTAATACGTTAATCCCCTCTCTGCCGTTTTCAGCGTATAACACTTGTATTTGATAACGCTCCAGCATACTTGTCAGCGCGAAAATATTACGCACATCGTCGTCTACAATTAGCGCTTTCTTGCCAGCGAGTAAGTAATCTATGGAATGCAATTGTTCAAGTATTTGTCGTTTGGGTGCTGGTAAATTTGCTTGGACTCGGTGTAAAAATAATGCCGTTTCATCAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 71297-70395 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000034.1 Nostoc sp. FACHB-133 contig34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 71296 37 100.0 34 ..................................... TGGAAATCCTCTAAAGTTTGCGGGTTGTCGATTG 71225 37 97.3 38 C.................................... CTCTCTCAAGTATGTAAAGTGCCTACCAAAATGCTCAA 71150 37 100.0 38 ..................................... TAATGCTTCCCCATCTGATGCACTAAATATAATCCAAG 71075 37 100.0 33 ..................................... TTATGCCAGACCACCCCCGACACAATACTTTCA 71005 37 97.3 34 T.................................... TTAAGACTCAACAGGATTCACCAGTTGTTTTAAA 70934 37 100.0 38 ..................................... GGGTTGATAGAAAATAAAGCTTGTGCGCTCCAAGCGTG 70859 37 100.0 33 ..................................... GATTCTCATTATGATTTTTCACTGACGCATTTA 70789 37 100.0 36 ..................................... TTGGTCTATCGCCAAAGAAGTAATTGACTTGATACC 70716 37 100.0 34 ..................................... TCTCTTATCTCATATCCAGATTCAGATCCCAAAC 70645 37 100.0 34 ..................................... TGATGATTGGTGGAAATCCAAGTATCAAAGCTTT 70574 37 97.3 34 ..........................G.......... AAAGCAGGGAAAATTAGAGACGAAAGAGCAGGTA 70503 37 94.6 35 ..........................G.........C GTTTGTTTGGATGAGGCAGGTATTTTATTGAATAC 70431 37 89.2 0 ............T.............G.....T...C | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 98.1 35 ATTGCAATTTATCAAAATCCCTATTAAGGATTGAAAG # Left flank : TCTCTACTGTTCATAGAATTAACAGACATGATACGTAATTCTTCGCTGGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCGATAACAGACTTTGAAGACGTTGGCAAATAAAGTTAATCATGGGGGTGCTGGTATTCTGTAGATGTAGCCCACCCCGGCATCACTCTAACTAATCAAGTAGGGTATTTATAAGTAAGCAGCTTTCCAATCAGATTAGTTTTTGGGCTAAATGCGCGGATGGGTAGGTGTTGGGGAAGGGGTAACTAGAAAAATGGCTGAACTGTGCTATATGCAAGAACTGGGGAGCGATGCCTGCGGCGGGCTACGCCTACGCATTTCAAACCATCCGCGCACCTTATGGAGACTAGTTTTCAGCCATTTGCCTCTAGCCAAATCACAATTCATCGTGTTATCATCTCAGCATTCGCGCAACCGAACCTTGAAAACCAAATAGGGCAAAGCTTTCAGAAGCCAGC # Right flank : GAATGAGAAAAGGGTGGACAAGTAGCCCACCCTAAACCATTATTTAATTAGTATTACTTGACAGGTGCTTCAGTAGCAGACTTACCAACAAGCATTGCGGTATTTTCGTCGCTTTCGAGGATACCGAATTCAATCAACAACTCTTCTAACTCTTCCATCTCAATAGGAGTGGGGACAGAGAGCTTGTCGTTGTTGATAATCTTGGTAGCCAATGTCCGATATTCGTTACTTTGATTGCTGTCAGGAGCGTACTCATTAACAGTCATCCGGCGCAATTCTGCGTGTTGAACGATGTTGTCACGAGGTACGTAATGAATCATTTGGGTGTTCAAACGTTTTGCCAAGGTTTCGATTAAGTCGATTTCCCGGTCAACGTTACGGCTGTTACAAATCAAACCACCCAAGCGCACGCCGCCAGTGTGAGCATATTTGAGAACACCACGAGCGATGTTGTTAGCAGCATACATCGCCATCATTTCACCAGAAGTAACGATGTAGAT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTATCAAAATCCCTATTAAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 178465-175687 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSH010000004.1 Nostoc sp. FACHB-133 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 178464 37 100.0 34 ..................................... TTTTTCTGGAGGTGACAATCACGATAGTAATAAG 178393 37 97.3 37 G.................................... CAAGCTTTGGTAATTTGTGCAAATCGCAGCAATAGTT 178319 37 100.0 35 ..................................... CTAACTAAAGTTAAGGAAGAATTTTAATGTCAAAA 178247 37 100.0 37 ..................................... TTTACCCCTGGCATGAAAGCGGGAGTTCCTGAATAAT 178173 37 100.0 34 ..................................... CTCGATAAACGGGTCTATAAACCCATTGATTCTG 178102 37 100.0 34 ..................................... AACTATGGCAGCATCGGCTCAACCTTTGGTAATG 178031 37 100.0 36 ..................................... TCTTAATGCCCTTTGAAAGTCCGGTAAACCTATTGG 177958 37 100.0 35 ..................................... GGGTAATAGTTTGGGTAACGATCAACATCCAAAGG 177886 37 100.0 38 ..................................... TAGCAAAAATTCCTGGAATATTGGGAGGAATTAATGAG 177811 37 100.0 35 ..................................... ATCTTTTATGACATCGAAAATGACACCAAGAATGA 177739 37 100.0 34 ..................................... CTGACCCTAACTACTATTGGGTATCTATAGTGGA 177668 37 100.0 35 ..................................... GTGAGACTGCACGTGGACATTTAGCATCTGCTGTT 177596 37 100.0 34 ..................................... GACACAGAGCGCCAGAAAAAGATAGACGACGGAA 177525 37 100.0 35 ..................................... GGCTATGCGGTAGTGGATGCGCTGAACCGACGCAA 177453 37 100.0 36 ..................................... TTTGAATCCATTCTCAGTACCTAAAGACCGCATAGA 177380 37 100.0 35 ..................................... CAAATCTTAGCCAGTGGATTAACCTTTTTAGTATT 177308 37 100.0 35 ..................................... ATTATTAATCCTTTGGGGTAAAATGCGCGATGAGT 177236 37 100.0 33 ..................................... AGCTTACCTCTGGGAAGGTAACGAAAACCTGGA 177166 37 100.0 36 ..................................... TAGTTTGTAGCTATTTTCTAGCCGTAAATCTATACT 177093 37 100.0 39 ..................................... TAGTCGCGATCGCGTTGCAGCTTTAATTGAGCAGGGTAA 177017 37 100.0 32 ..................................... TATTTGATTCATGGCAAACACAAGCCAACACA 176948 37 100.0 34 ..................................... CTAAAATAGTGCGATCGCACGGTTTGACTAGTTG 176877 37 100.0 33 ..................................... TTAAGGGCAGCAAAAAGAAGACAGATTTCTGAA 176807 37 100.0 37 ..................................... GATTCCGATCAACCCAGAGTACCTGGCAGTTAATACC 176733 37 100.0 37 ..................................... TTTTAGGAAGGTACTTTGTGATATTGCGTTGAATAGC 176659 37 100.0 34 ..................................... CAACGACCACCACCAAGGCGCTCATGCTTTTCAA 176588 37 100.0 34 ..................................... ACAAAAATACCACACTTCTAAAATTCTTCCATCC 176517 37 100.0 35 ..................................... GAGTGCGCTAAGTCGGCAAAAAATTGGGATGATAC 176445 37 100.0 38 ..................................... CAGGCGGAACGCTCGCCCTTGGTGGAGGGGGAGGGGAA 176370 37 100.0 35 ..................................... TCAGATTACTAGCACTTTCTCTAGTGCTGCGACTT 176298 37 100.0 34 ..................................... TGGTACTGCACCTCCGCAGCAGTAGCAATTCACT 176227 37 100.0 37 ..................................... GCAGAAATTGGGATTTTATGGTAAACAAATTTCTGAA 176153 37 100.0 33 ..................................... CTTTTATTTAATAGCTATATCTGCAAGATTAAT 176083 37 100.0 35 ..................................... ATCGGTAAGCAGCGCAAGAGCTAACGCAACTCCAC 176011 37 100.0 34 ..................................... TCTGGAGAGAATGAAAGCACCGTGTCGGGGGTGG 175940 37 100.0 33 ..................................... AAACCCGTACTGCTAATAGATATTGTAGCAATA 175870 37 100.0 36 ..................................... TCGACATTTGATATGAACGCTCATCAACTTTACAAG 175797 37 100.0 37 ..................................... AGACCAGAAAAATACCAGAACCACCGCCAAAGCCAAA 175723 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 39 37 99.9 35 ATTGCAATTTATCAAAATCCCTATTAGGGATTGAAAC # Left flank : ATTTCTTTCATCATCTCTACCTTAAATTGGCGGAAACTTGATTTTTGGTTATCAGTACAGTAGTACGACAACAAATATTAAAATTTATGAATCAGCTTACCGTAATATCTTAGATTCGTTTGCTGTCCAAATGTTTTTTCTATGTGGCTCTTGTCAGAGAAAAGCCGCCTGTATTGGCAAAGAATAAGCCACTGGAATAAACAATTTTCTGTACTGAGTTCCATTCTGGCTAAGTTCCCATATCTCAAATGCGCGGAAGGGTAGGTGTACAAATTCTATAGCCCCCAAAAAGTGATTATATTCCAAGCACAGTAAGGCTTTCAACCTATTATTCCCCTAATCCTCATCCGCGCAATCTCTAAAATGCTTATCAAAACACGATTTCAGCCTTTAAATTTTCCTGGCGCTCTTTCCAAACAAATTCTGTAATGTTATGATTGCCCTTGAATCGCGCAACTGTACCTTGAAAACTAAATACAGCTCGGGTTTCAGGCTCCCGC # Right flank : GATTGAGTGGATGCTAGAAAGCATCGACTTGCAAAAGTCAATTTTATGAAAATAAAAACACAGATGAACACTGATAATTTCTCTGTATCCATCTGTGATTATGTGGTGTCAATACCTGGGAATTAAACCATTAGACTTGTTGTATTTCGGGACGACCATCTTCAACCACAAATGAAGCCCGTTTACTAATCGTGCCAAATGGGGTTGTGACATTTGACATAACCAAATAGTCTGTCTTCCAGTTTGTGGGAGTCAGGGAACAACGAACATAGCCCCGTTGATTATTGAAGAACTTAATATGTGGGTTATCGGGTAAGTAAGCTTCAACTGCGGGGGTGGTGTCTGATCCATCTCCACCGGAGCTAATTGAAGAACAGACGAATTCACTGCCAACTGTGGCGGATTGTGGATTATCAAAGTTAGCTTTGAGATTCATCGCCCAATGAGAATGCACATCGCCTGCTAAGGATACTGGATTAGAGGGCTGGCGCTGTCCGAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //