Array 1 9275-5740 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBMN01000017.1 Bieblia vinaykumarii strain JA123, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 9274 36 100.0 30 .................................... CATGCTCGACATGCAAGAGCGCATGATCGA 9208 36 100.0 30 .................................... ATCACTGACGGTGCGCCAGTCGGTGAGGGG 9142 36 100.0 30 .................................... CCGGGATTGCGCAGCCGGAATGGCGATTTG 9076 36 100.0 30 .................................... GCCATCCACATGCGTGATGAGGAACCCGCC 9010 36 100.0 30 .................................... AAGAGCCTGCCACGCGTCGGCGATCATGCG 8944 36 100.0 30 .................................... CAAGCGTCCGATAATCCATCAGTCGTCCTC 8878 36 100.0 30 .................................... CGATAATTTCCTTTCTGCTTATTGCGATGC 8812 36 100.0 30 .................................... CTTGTCCTTTTTCGCAAACGGTTCCTTCTC 8746 36 100.0 30 .................................... ATGCGGATCGGTAAACCATCCCGTGTGATC 8680 36 100.0 30 .................................... GGGCCGTCCATGCTCTACCACCCACCAGCC 8614 36 100.0 30 .................................... TGAAACCATGCGTGAGGGGCACTGCGAAAA 8548 36 100.0 30 .................................... TTGCGCAACCGCGTTGGCGACAGTCTCGTT 8482 36 100.0 30 .................................... GGGTTGCTGCCGCGCCATAGGGTTACGTCC 8416 36 100.0 30 .................................... GAACGCTTGCAGCTTCCACACTTCGCCCGC 8350 36 100.0 30 .................................... CACGGGGGTCTCCTTTCAGTTTGGCCTTAT 8284 36 100.0 30 .................................... AAGAATGGCAAGATCGTCTCCATCCTCACC 8218 36 100.0 30 .................................... ACCAGCGGGGCGCTGCCATCGTGCGCATGT 8152 36 100.0 30 .................................... AGCCCAGCGGCCAACAGCTCGTCTCGTTGG 8086 36 100.0 30 .................................... CGGCTTGGCCATGTCAAAAACCCCCCTTTT 8020 36 100.0 30 .................................... GGGTGCGGCATAACTTCCGCGTAGGCCGCT 7954 36 100.0 30 .................................... GCTCGCAGTCAAGCTGCGGGCTGCGGATGC 7888 36 100.0 30 .................................... CAGCGTGTTGTTGATCTGGTCGTCGTCGAG 7822 36 100.0 30 .................................... ATGGTCTGGAAATGGTAGTCCACATCCTCG 7756 36 100.0 30 .................................... GGCCCGGCGATGCGCGAATGCCTCGAATGG 7690 36 100.0 30 .................................... AGGCGATCATCGGCGACATTCCCGGCCCGC 7624 36 100.0 30 .................................... TGGAACGACCGCCGGGTGTACATCAACTTC 7558 36 100.0 30 .................................... GAATGAAAACAGGATCCACCTCCAGACTTT 7492 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7426 36 100.0 30 .................................... GAAGATGGACGGCGCGCGTGCCTTCGCCGT 7360 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7294 36 100.0 30 .................................... CATATCGCGGTCGGTGTCGTTGACCGTGAG 7228 36 100.0 30 .................................... GAAGATGGACGGCGCGCGTGCCTTCGCCGT 7162 36 100.0 30 .................................... GTGGACAGCAACCACGACAACGCACTCGAG 7096 36 100.0 30 .................................... ATGGACCCCGAGAGGCTGCACCGGGCAGCC 7030 36 100.0 30 .................................... CTGGGCGTTGACTTCGTCGGTCCACACATA 6964 36 100.0 30 .................................... CGAGAAGCTCTGCGTCCAGTCGCGGGTGTA 6898 36 100.0 30 .................................... CATCTTCCGAACGTCAACTACTGGACCTAT 6832 36 100.0 30 .................................... CAGGTGATAGGTCGAGCCCGAGCTGTCCGT 6766 36 100.0 30 .................................... GATCTGGGCCGGGAAGCACCGTTGCAACCC 6700 36 100.0 31 .................................... TCTCGTCTGGCCACGGACCATCTGCAATTGC 6633 36 100.0 30 .................................... CGGCGATCAAGCAGCCCGCAAGCAGTCATC 6567 36 100.0 30 .................................... TAGCGACGCGATATCCCTCTCAGAACAGCG 6501 36 100.0 30 .................................... GATTGACGCGGTTGCGTCATGGAAAGCCGC 6435 36 100.0 30 .................................... CGGCGATCAAGCAGCCCGCAAGCAGTCATC 6369 36 100.0 30 .................................... TAGCGACGCGATATCCCTCTCAGAACAGCG 6303 36 100.0 30 .................................... GATTGACGCGGTTGCGTCATGGAAAGCCGC 6237 36 100.0 30 .................................... CGGCGATCAAGCAGCCCGCAAGCAGTCATC 6171 36 100.0 30 .................................... TTGTCATGGGTTAATGGCGCGTGGTCTGAT 6105 36 100.0 30 .................................... TCCTCTCCGCGCTCAATCAGCGCGTTGGCG 6039 36 100.0 30 .................................... CGCGCGCACCGCGTCCCATTCGCGCGCGCC 5973 36 100.0 30 .................................... GTCACGATGCGCGTCAAGGCTGCGCAGAAG 5907 36 100.0 30 .................................... GGGATCAGCGCATTGACCAAAAGCTGGCCG 5841 36 100.0 30 .................................... TGTCATCGGCCCCTCGTGGCCGCATCTGCC 5775 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 54 36 100.0 30 AGCTTAGCCATTCAGAAACCGCAGGCCAACCGCAAC # Left flank : CCGGATCTGCTTCTTTTCGATCCTCCGACGGCGATCGAATGGGGGGCGCTGGGGCACCTTGATGACGAAACGCCATGACAAAAGCGATGAAAGACGGGGCCTATCTGAACGGGTATCGGCTGATGTGGATTTTCGTGATGTTCGACCTGCCGGTGGGCAGCAAGGCAGAAATGCGAGACGCGACGCGGTTTCGCGAATTCCTGCTCGATGAAGGCTTCGAGATGAGCCAGTTCTCGATCTACGCCCGCTTCTGCAACGGCAAGGACAGCTATGAGTCGTATCTGCGACGGATCGAGGGTAATCTGCCCGAGAAAGGGGAGGTTCATGTCCTCACGTTCACCGACAAGCAGTATGAGGGAATCGTACGATTCTCCAGCCAGCGCAGGCGCAAGCGCCGGGAAAACCCGGACCAACTTGCGTTGTTCTAGCTTTGTCCGCAGGCTTTGGCCAACCGGATGCGCTGCTTCTTCTTTGTATTTCAGAAGCTTGGCAGCGCATCC # Right flank : GCGGCGGCTCTTGGCCTTTGCCTTCGCCGGAGCCTAGGCTCTGCGCGCTAGATTGCGCATTTTGCGGGCAATACGGCCATGCAGAATGCGGGCATCTGACTTCCATTTGTGCAAAGGGCGGAAATGGACGTGTCATGTCGTTTTGGGCGCGCCCGCGGCTCCTGCCTTCGGATCATCCGGGCGGACAGGAGGCGGGGATCTGCCCCCCTCGTGCCCCCCCCGCGCGGTTTGGGGGCGCGCCAAGATGTCGGTGCGGGGCTGCTCGCATCGCAGAGGAGGGCCAGGAATGCGCATGCCGACGCGTGTCGCCGATACGGTTCGCATCCGCACCCGCGGCGCCGTCAGGGGGCGTTATCGCGGCAGGGATACTGGCCGTCCTCTTCTTCTCTGGCCGCAGAGGCGTGTCACCGGCTGACCTGCCTCCATCCGTTTTCGCAGCGCAAGGAACGCAAACACGATGAAGAAACTTCTTCTCACCACGGTGATCGCCTCCAGCTTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCTTAGCCATTCAGAAACCGCAGGCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 367980-364583 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBMN01000001.1 Bieblia vinaykumarii strain JA123, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 367979 31 100.0 35 ............................... GCAGCATCAATGGTCCGTGGCGCTGATCGCGCTGC 367913 31 100.0 34 ............................... ACCTTCGGCGTAGACATGTTGACCGCACAAACTT 367848 31 100.0 34 ............................... CATCGCGGTGATCGCGGCCTGCGCGCGACGAAGG 367783 31 100.0 35 ............................... ATCCTCGTCGAGGAAATTCACATGGAAGGGCGCCG 367717 31 100.0 35 ............................... CACGTCTCCGCATGTGTGAGTTAGCCCGGCAGGTC 367651 31 100.0 34 ............................... CGTGGTGCAACCGTAGGTAGTAAATGCGATTTAT 367586 31 100.0 34 ............................... ACTTCCAGGACGCCGGGCGGTTGCTGGTGGAAGC 367521 31 100.0 36 ............................... GTTTTCACCGCGACGTAATCCACGATCCTCTCGCCC 367454 31 100.0 35 ............................... TTTACGAGATGGAGCCGGTCACATGAGCGCCTCAG 367388 31 100.0 35 ............................... ACCATCATCGACGAGCTGCACGAGCTGGGGAAGAA 367322 31 100.0 35 ............................... ATGCTGATGCTGCGCGACCCGGAGGCCCGGCACTC 367256 31 100.0 34 ............................... CGGTGGGGGGCGGCGCATGATCCCCGCCCGCCGT 367191 31 100.0 37 ............................... AGCCCGCAGAGCGTCTCGAACACCTCGGTCTCGGCAC 367123 31 100.0 35 ............................... AAGTATGACCGGAAGGTCTATTCCGGCCTGCCGTC 367057 31 100.0 36 ............................... GCGCGCCTTGGCCTGTCTGGCGACGACCTCAAGAAG 366990 31 100.0 34 ............................... ACCCAGATCCTGGGGGTCGAGACGCTCAACGTGC 366925 31 100.0 36 ............................... GCAAACCGTGAGGCGGTCAACATCGGCAACACCACC 366858 31 100.0 34 ............................... TGGGCCGATGGTCGCGGCACGGCCTACGAGGGTT 366793 31 100.0 35 ............................... AGCGCGAACACCTGGGCGACCGGCCCTATGCCGCC 366727 31 100.0 35 ............................... TCGAGGATATGGGCAATAACGATGCGGCTGTGCAG 366661 31 100.0 36 ............................... CGGGCGGCGATGGGACGCCAATACGTCACCGCGCCA 366594 31 100.0 35 ............................... CAAAAGCTCGAGTGGCAGAAGACCAGGGACCGCAA 366528 31 100.0 35 ............................... CGCGTGTCCGATGGGCAGACTTTCCCGAACCGGAC 366462 31 100.0 34 ............................... CAGGCCGCGACGATACCGTCAACCGTGAATACGG 366397 31 100.0 34 ............................... TGGATATCGCTGGTGCTGCAGCGGCTGCATTGCG 366332 31 100.0 35 ............................... CGAGTTGATGCTGGAAATCATCAAGCGGCTCGGTG 366266 31 100.0 36 ............................... AGCGCGAACACCTGGGCGACCGGCCCTATGCCGCCG 366199 31 100.0 35 ............................... GTTAGGCGGGGCGCGACGGCGAAGCCGAATTACAG 366133 31 100.0 39 ............................... GTCGCCTGGAAGCCGTGAGAATAACAATCCTGTAGGCGG 366063 31 100.0 34 ............................... GTCGCAGCCCCATCCGTATCTTGCTGACGTCTGG 365998 31 100.0 34 ............................... GCGTCACCTATGGGAAGGAATGCTAATCGTGACT 365933 31 100.0 36 ............................... ACCTGGTTATGTCTCGTGGTCAGAGCAAACCGCGGG 365866 31 100.0 34 ............................... GAATCCGATCTGGAAATTCACGGGGCGAAATATT 365801 31 100.0 35 ............................... GGCGGGTCCGCGGGGGAGCGGTTCGTCGAGCTGCT 365735 31 100.0 35 ............................... CTCCTCCTCGAACTCCACCTCGTCGGCCAGCTCGC 365669 31 100.0 35 ............................... AAGCCCACGTCTGCCTCGCGTCTTGAGCGCGAGAT 365603 31 100.0 33 ............................... CTTGACCAGATCGGCGGCTGTGCTGTCGAAACC 365539 31 100.0 35 ............................... GCCGGTCAGAGACTGCGCCGCGTGCGATCTGATCC 365473 31 100.0 36 ............................... AGCGCAAAGCGGCCGACGCGCTCGGTCAGCCGCGTG 365406 31 100.0 34 ............................... AACGTCTGGAGCATGGCGGCCAAGAAATGAGCCT 365341 31 100.0 35 ............................... TCGCGCAGCTCGCTGCCGTTGCGCGTCAAGCAGAT 365275 31 100.0 35 ............................... TTGTCGCGTTGGCTGCGCTCGGATGGGCACGCCCT 365209 31 100.0 36 ............................... GCCTCGATGTGGTCGAGCCTTCAGGACCAGGCCCGC 365142 31 100.0 33 ............................... GATCTGCCCGAGGCGCTGGAGATCTCGCGCACC 365078 31 100.0 36 ............................... ATACGATCCCGTCAACTGCAGGGTGATTCCACCGAC 365011 31 100.0 35 ............................... GATCCCGAGTGCCACCACCTACACGGGGGTAGATC 364945 31 100.0 35 ............................... GACGTGATCCACGCCAACATTGACAAGGAGGGCCG 364879 31 100.0 36 ............................... ATAGGTCTCGACGGGGGGACGATCAGGCTGGCGCAT 364812 31 100.0 35 ............................... TTTAATCGGCCGTCCGTCTTCGCCCACCGGGCCCC 364746 31 100.0 34 ............................... CTCGATCCGCTCGCGGTATGGTCTGGCCGGGATG 364681 31 100.0 36 ............................... CACGTCAAGCACTACGGGCGCCACGGCGGGAGGGGG 364614 31 83.9 0 .........................G.CCTT | G [364586] ========== ====== ====== ====== =============================== ======================================= ================== 52 31 99.7 35 GTCGCCCCCACCCAGGGGCGCGGATCGAAAC # Left flank : ACGCCTATCCCCCCTGGTTCTGGAGCTGAGGCATGCTGGTTCTGGTCACCTATGACGTCAACACGCTGGAAGAGGGCGGCAAGAAGCGCTTGCGCCGCGTCGCCCGCGCCTGCGAAGATTACGGTCAGCGCGTCCAGTTCTCGGTCTTCGAGATCGAGGTCGAGCCCGCGCAATGGGTCAAGCTGAAGGCGCGCCTCGAGGACATCATCCACCCCGAGCATGACAGCCTGCGGTTCTATTATCTCGGGGCGAACTGGAAACGGCGGGTCGAGCATGTCGGCGCCAAGCCCGCCCTCGATCTCGGAGGGCCGCTGATCCTCTAGGCTGCGAACCACAAGCGTGCCGGCGGTCCCGCCGGTGTTCGCATCGTGCGAACTCCTTGAAATCGTTGATCAGGAAATGACAACCGGGCGCAACCGGCGCGCCCGCGGCATTCTGCCGTCCCCATGCGCGGAAATGCGCTATTTTTCATAATGAAGAGAGGAGGTTAGCCTGAGCCA # Right flank : TGGGGGCTCCGCGCTCCTGTTTCTTCTGGATCTGGCGCGTGTGGGGATCCTGGGAAGGGGGGGCAGGGGGCGGCTGGATCAGGGGCGGTCGGGCTCGACCGGGGCGCGGGCGTGGAAATGGTGGGTCGGGCCGTGGCCCTGCCCGACCTCGAGCGCGCCGGCCGCGGCGATCGCGCCGGCGATGTAGAGCTTGGCGCGCCGTGCCGCCTCGGGAAGGGGCAGACCGTGCCCGAGGAACGTGGCCAGCGCCGAGGACAGCGTGCAGCCCGTGCCATGTGTCCGGGTCGTCTGGATGCGCGGGCCGGACAGCCAGTGCAGCCCTTGCCGATCGGCCAGCAGATCGGCGCAATCGGAGGCCGGCAGATGCCCGCCCTTGAGCATCACCGCCCCCGGCCCCAGGTCCAGAAGCGCGCGGGCCTGCGCCTCCATCGCGGCGGTGTCGGTGGCTTCGGGCCGGCCCAGCAGATCGGCGGCCTCGGGCAGGTTCGGGGTGATGACGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCACCCAGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //