Array 1 11156-9276 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTE01000022.1 Streptobacillus moniliformis strain ATCC 49940 contig_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11155 36 100.0 30 .................................... TAATATAACTCAAATTAAAGTACCCCCCAA 11089 36 100.0 30 .................................... TTTATTAACAACTTTTTACGAAGGGGAAAC 11023 36 100.0 30 .................................... GCCATCTAAAAAATAACGGTGAATTGTTGT 10957 36 100.0 30 .................................... ACACTCCTCTTCTTCGTCTTTAAAAAAGTC 10891 36 100.0 30 .................................... TAAAAAAAATTTTAATTAAAAGTGTTTTTG 10825 36 100.0 30 .................................... TGACGGAAGCACAAACTAAAAAACTTTATG 10759 36 100.0 30 .................................... TCGATTTTGTCCATCCGTCAATATTTTTAA 10693 36 100.0 30 .................................... AGTTGATGTAGATAAAAGAAAAGTTTCTGG 10627 36 100.0 29 .................................... TAAAAAATGAAATTAACTATAACAATTTT 10562 36 100.0 29 .................................... TTTTGTACTGTTATGAAACTTTCATTTAG 10497 36 100.0 30 .................................... TGGCACAAGAAGATTTAATAAAAACGGAAA 10431 36 100.0 30 .................................... ATGATAAAGATATTTATGAGGAGAAAAGCT 10365 36 100.0 30 .................................... ATACAACGCCAGTAACACAAACAGCGCCGA 10299 36 100.0 30 .................................... ATTATAATATAAGAGAACCAAAAGTTGAAA 10233 36 100.0 30 .................................... CACACTCAATTAATTCGTGTTCTAGCCTTA 10167 36 100.0 30 .................................... TTACAGCAATTTTACCTAACATAAACGACT 10101 36 100.0 30 .................................... ATGAAACCGCTCCATCTTTTAATTTAGCAA 10035 36 100.0 30 .................................... TCGATTGAAGAAATGGTAACTCAAATGGCT 9969 36 100.0 30 .................................... ATGAAACCGCTCCATCTTTTAATTTAGCAA 9903 36 100.0 30 .................................... GAAAGGAGTAAAAAATATGGATTACACTTA 9837 36 100.0 29 .................................... TAAAAAAAGGAACGAATGGACTTTAAGAT 9772 36 100.0 30 .................................... GAAAGGAGTAAAAAATATGGATTACACTTA 9706 36 100.0 29 .................................... AAAGGTTAAAGGAAAACGAAGACTGCCAT 9641 36 100.0 30 .................................... ACAATCTTCTAACACCTTTTCAAATGTTTT 9575 36 100.0 30 .................................... GTCAACATATCATTAATATTTATACCTACA 9509 36 100.0 30 .................................... CGAAGAAATGGTAACTCAAATGGCTCTAAA 9443 36 97.2 30 ..................................A. AAATGGTCTGTCTTTAGAATATGCAAGCGA 9377 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9311 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.1 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATGATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //