Array 1 210128-214177 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXJD01000003.1 Acinetobacter radioresistens strain A154 NODE_3_length_227469_cov_13.7524, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 210128 28 96.4 32 ............T............... AAAATGCCTGGGAATATGAAAACTCACCGACA 210188 28 96.4 32 ............T............... AATGATGGTGTAAAGCATGTTGAATTCCGCAT 210248 28 96.4 32 ............T............... AGCATTCGCCTAAGGAACCCCCATGAGCAAAG 210308 28 96.4 32 ............T............... TAAATTGATATTGCTCACATATAAGTAGCGCT 210368 28 96.4 32 ............T............... AACTTCATACCCAGCTCCGCAATAATGCTAAA 210428 28 96.4 32 ............T............... AAGTCCTAATAAAATGCGAATTGAAATAGGAA 210488 28 96.4 32 ............T............... TAACAAGACGAGAGAATTTTATCACAGAAAAC 210548 28 96.4 32 ............T............... TTGCTAAAGCGATACAGATCACGAACAGAATG 210608 28 96.4 32 ............T............... TGAATGCTCGAAATGGTTTGATGATATTTCAA 210668 28 96.4 32 ............T............... GATACCTTTGAAAGTTGATCTTTTAAACAAAC 210728 28 96.4 32 ............T............... TATAACCCCCGATAAATCAGTTCCAGAACCGC 210788 28 96.4 32 ............T............... GTATTGCAACAAAAGTTGAATCAAACGGAGAT 210848 28 96.4 32 ............T............... TGTTTCGTCATGTACTCCGCTTTTTGATAATG 210908 28 96.4 32 ............T............... AGATGAAGCTAACTGATCTAAAGTTGCAGCAT 210968 28 96.4 32 ............T............... TCCAGCTGAGTGTCCACCGCAAGGTTATCCGT 211028 28 96.4 32 ............T............... TACATCTGCTAAAGCAGCCTGAAGCATTGCTA 211088 28 96.4 32 ............T............... ATCTATCGCTAGAACTTCACCATCTTGCGTGT 211148 28 96.4 32 ............T............... TTGCCACTCAACTTCGGGACGGTGAAACCAGA 211208 28 100.0 32 ............................ TTGCCACTCAACTTCGGGACGGTGAAACCAGA 211268 28 100.0 32 ............................ TCTCTTGCGCTGTCATTCGCGCCGTATTACGC 211328 28 100.0 32 ............................ ATTCAAGATAATTCTCAGGATTTTGACCAAAT 211388 28 100.0 32 ............................ TCTCTTGCGCTGTCATTCGCGCCGTATTACGC 211448 28 100.0 32 ............................ ATCAGCCGGATAGACACTAGAATCCAGACTGG 211508 28 100.0 32 ............................ ATGGGCGACATGAAAGCGGCTGAGCGTCGATT 211568 28 100.0 32 ............................ ACTTTGTGGGATCGAGTCAAGGATGGAATTAT 211628 28 100.0 32 ............................ CTGCTGATCGGCTTCATGATTGTCTGGCTGAA 211688 28 100.0 32 ............................ TACATCGACCAGTTTGAGATTGAGCGCATTAA 211748 28 100.0 32 ............................ TGTTAATGCAATGGTTAGCGTTGACGATCTAA 211808 28 100.0 32 ............................ CAAACGGGTCTTTTTTTATGCCCGCAGTTTGT 211868 28 100.0 32 ............................ CTGCTGAGTATATGCAATATAGCGCCCGTTCT 211928 28 100.0 32 ............................ ATTCAAGATAATTCTCAGGATTTTGACCAAAT 211988 28 100.0 32 ............................ ATTGGCATCAAGTGTAGCTATGCCATTTGCTA 212048 28 100.0 32 ............................ TTGACGGTTCAACTGTTCCAGTGGCGCTTTCT 212108 28 100.0 32 ............................ ATTATTGCGCTTTGGCATCTTCTATTCTTTCC 212168 28 96.4 32 A........................... AAGCCGGGTTATTGGTGTATGTGCGTTTGAAG 212228 28 100.0 32 ............................ AATGTATATCCTGAATTTGGGCCGCCTAAACC 212288 28 100.0 32 ............................ CAGGTCCGCGACTGAATCCAAGTTAGAACCGG 212348 28 100.0 32 ............................ ATCTATTCCGACACTTGCACTTGAACTAACAT 212408 28 100.0 32 ............................ TTCTCATACCCGCCCAACTGTTCAATCAGATT 212468 28 100.0 32 ............................ AAATACGCTTTAGACCAAGTGACGCACCCAAT 212528 28 100.0 32 ............................ TTCACGTCGCGGCAGTGAAATCGCGATTAACA 212588 28 100.0 32 ............................ TTCGGGCCACGCTCTAGTTTTTCTAAGCAGCA 212648 28 100.0 32 ............................ TCTCTTGTAATGGGTTTCATAATATAATATAG 212708 28 96.4 32 ............T............... ACAAATGTTGACCATTGAGCAGTATCCAGAAA 212768 28 92.9 32 ...T........T............... AGAAAATCAAAATAATCAGGTGCAAGCGGTTC 212828 28 92.9 32 ...T........T............... TGAGTATATTGAATTGCCATTACAAGCAAAGC 212888 28 96.4 32 ............T............... TTTAAAATTGCATCAAGTGACTTATATTTTTT 212948 28 96.4 32 ............T............... ACCAAAGCTTGTCTCTGTTCTACACTTGCCGC 213008 28 100.0 32 ............................ AGAGTCACCACACGTATGTAACGTGCCTGATG 213068 28 96.4 32 ............T............... AAGGTGAAACTATGGGACTAAGACCGTTCTTT 213128 28 92.9 32 ...T........T............... AAAAGATGAGCGGACCGGAAAGATTGGGCAGG 213188 28 100.0 32 ............................ TTGATGATTGCCTTTGATTGCAGTTTTTAGAG 213248 28 100.0 32 ............................ ACTTTCGGAATACTGCTGGGTCTGGGCAAAAA 213308 28 100.0 32 ............................ ACCATGCGACTGCACCGACTCATGACTCTCGA 213368 28 100.0 32 ............................ AAAGGTAGTTCAACAAAAGTCTGCCGAGCAGA 213428 28 100.0 32 ............................ TTCAAGTTTTGTTCTATCTGACTTCTTGAATA 213488 28 100.0 32 ............................ AAGATGACGTTTGGCTTCTTTCATCCAGCCCA 213548 28 96.4 32 ............T............... AATCAGTTGTTCAACAGCGACAGACAATGCAT 213608 28 92.9 32 ...T........T............... TTGGAAAGATCGGCAGTGAAAACCGCCGGGTC 213668 28 96.4 32 ...T........................ CATCATTGCAGCATTGGATCTGATATTGTCAA 213728 28 96.4 32 ............T............... GATATGCGCCGTTCGCCAGCTTCACGCTCTCC 213788 28 96.4 32 ............T............... TGAGTCTTTTAAGCCGGACATAGATATAATTG 213848 28 96.4 32 ............T............... TTGATCGTTAATTTCTGGCTGATCAGTATCGG 213908 28 100.0 32 ............................ TGCAGCTTTAGAAAGTTTATGATGTGTGTCAT 213968 28 92.9 32 ...T........T............... AGCTCATGACTTTCAACAAGGCGTTTTAGGTC 214028 28 92.9 33 ...T........T............... AGAACGCCACTAACATGACGATGAAAGCCCCCC 214089 28 92.9 32 ............T.........G..... TATTCCTTATCTTTCGGCTTGTCATCTATGAA 214149 28 71.4 0 ......T..TC.A..A..A.......TT | A [214172] ========== ====== ====== ====== ============================ ================================= ================== 68 28 97.4 32 GTTCGTCATCGCCTAGATGATTTAGAAA # Left flank : TCGTTGGGCCAAAACGTTATACAAGCAACTTGCTAAAGGCTTTGGTGTTGAGTTCATTCGCGATGAAGGAAAAAATTCTCATGATACTATTGCTGATATAGCCAACAGTTATCTCGATCATGGAAACTATATTGCCTACGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCTCTCCCTATTTTGCACGGTAAAACACGTCGTGGGGGTCTAGTCTTTGACCTAGCTGATCTAGTGAAAGATGCTTTTGTGATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACAAAGATATTTTAGATTACATGTTTGGCTTCATTACTGACATATGTAGTAAAATTAAATAAAATCATATAATTAAGTTTTATACTTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTCAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTTAAAGAGGCATAGTAAAAACTTCTATAAACAATAAAATTATTAAAAACAGAATTATTGTTTAATAAATCATCCAATTTCATCTACATTATTAAATTAAAAAGGTATTATGAGCCGAAATGTGTCAGAATTTGATTAATTTATGATGTTCATGAGAAAACTGGGTAAGTCTCTTGACCTGGACTTGAGAAAATTAATACTTTTATTAATCGTATTCTGCGTATCTACACTCTTCTTTGTATCTTTAGGCGTGAGTTATTTAATCGTAAAAAACCAGTTAATCAGCAACTCTTTAGCGATTAACTCGGAATATGCAAATAAAATTGCCCTTAATACAGACAATCATTTTCAAAATATATTAAAAGAACTCAAGTACAGTGCTCAATCTTTGGGGAAAGACTTTAACAGTTTTGCGTTAAGAGAAGCAGAAGTTAACCGTCTAAAATACCAGTCGGATCACTATAACAGTGTAGTCATTGGTGATGCTGAAGGCAGACTC # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCTAGATGATTTAGAAA # Alternate repeat : GTTCGTCATCGCTTAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //