Array 1 128571-133457 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDMB01000006.1 Desulfobotulus mexicanus strain PAR22N Contig_59, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 128571 32 100.0 35 ................................ AAAAAATCAAAATCAGCGTAGTTGGTCTCGGAAAA 128638 32 100.0 33 ................................ TGACACAACAAGCTCCCGCACGGATGCACTCAG 128703 32 100.0 33 ................................ TACAACAGCATTGGCTTTAATGTGCGCAACAAT 128768 32 100.0 32 ................................ AGTTCATCATATTCTTTCTTCATGTCCTCTTT 128832 32 100.0 34 ................................ AACGGTGATAGCTGTACCCTCTGCAAAACCAGTG 128898 32 100.0 34 ................................ AACATCCGCTGTGATAGTAATAACCCTGGTCTCT 128964 32 100.0 33 ................................ TAATGAATGCATATATTATTTTGAGTATCATCG 129029 32 100.0 33 ................................ AAAAAGAAAATGCTCAATACCATTTAAATCCTC 129094 32 100.0 33 ................................ TCCTTCTTTGTTGTTTGTGTTTCCGTCATTGTT 129159 32 100.0 33 ................................ AATATAGACTATCCCGCCCAGCTTGTCAACAAA 129224 32 100.0 32 ................................ TTCTGTTGCCGGGTTGTCGGATCTGTTGCAAG 129288 32 100.0 34 ................................ TAATTTCAAGAACAAAATCTCCATCTGTGCCTTT 129354 32 100.0 33 ................................ ATGCTGCTTGCCGTAAAGAATATGGGGGCCGCC 129419 32 100.0 34 ................................ TGGAAAATGCACAAGGCCAGCCTCACAAAACGGA 129485 32 100.0 34 ................................ AGTACCCAAAGAAAATTTTCCTCCGGAAAATTTC 129551 32 100.0 34 ................................ ATTTCACACGCAAAACCGAGCGGGATCACAATAT 129617 32 100.0 33 ................................ TGACAAACTACTGCAAATAAGCCTTGACAATCC 129682 32 100.0 33 ................................ AAAGTTCGGATCATCAGAAATCAAAAGCTCTGT 129747 32 100.0 33 ................................ TCTGTTTTGCCGGACGGGAGGCAGATCACGCCT 129812 32 100.0 33 ................................ TTCCCACCAGCCGGACGAAAAAAAGATTTCTTC 129877 32 100.0 34 ................................ AGGCCATCATGGGAATGGTTATGGCTGTGAGGGG 129943 32 100.0 33 ................................ ACCCTTTGCAGCCCACTGGTATATCAGGCGGGA 130008 32 100.0 35 ................................ ATTTGATTAGGGGAAAAAAAGTTGTATTGATCGGT 130075 32 100.0 32 ................................ TTGTCCACCGGGTACATATATGAATAACGAAG 130139 32 100.0 33 ................................ AGGACGAAATAGCCGAGGCTTTTGAGGTTTCCC 130204 32 100.0 34 ................................ CCGGAGATCTTTGGAATACCTTGGAAGGATTTTC 130270 32 100.0 33 ................................ AAGCAATGCCTTTATTTCCGGGTCTGCATCGGG 130335 32 100.0 33 ................................ AACAACAATTTCATTAGATGCAAGGATTGTAAG 130400 32 100.0 34 ................................ CACGCTATCAGAAGCCGCCCCTGATATGCTGGCG 130466 32 100.0 34 ................................ TTGTTGTTGTGGGTGCTGTTTTCACCATAACCAA 130532 32 100.0 33 ................................ ATATACTCATGCGGGGGCTGCTCCCCAAGCTGC 130597 32 100.0 34 ................................ ATGTACTCGTGCGGGGGCATCTCCCCAAGCTGCC 130663 32 100.0 33 ................................ TTTTATGCCTATCTGTTTCAATCGTGCGACCTT 130728 32 100.0 35 ................................ CCCTGCAAGCTGGACGATCTTTTCGAGGGTTTCTT 130795 32 100.0 33 ................................ TTCAATGAGTGCAAGGCAGTCCGTCTTGTGTGG 130860 32 100.0 34 ................................ TGGATCTATGACCATTGGGGATCGAGCAATGTCG 130926 31 96.9 35 .........................-...... ATAGATGGCCTGGGCATGAGCCAGCCTGTCATACT 130992 32 100.0 34 ................................ ACCCAACGCTAAGGGCGGCACCGGAACGGCATAT 131058 32 100.0 33 ................................ CCCCGGTGCCGCTGAGCTGAGCCGTGCTATCAA 131123 32 100.0 34 ................................ TATAAAGCAGGGGCTGAGTTTACCCCGAAGCGGG 131189 32 100.0 32 ................................ ATGGAGCCGATGGACGTTTGCGGGGCCTGTGC 131253 32 100.0 35 ................................ TGACCAGTATCGAAGAGGTTGGTTACATCCAGGAG 131320 32 100.0 34 ................................ CAGTATGTCTTTTGTTGTTGTGCGCCAAAAGTTC 131386 32 100.0 34 ................................ GGGGCCTACATCTGCAATGAGCTGGCAGATCCAG 131452 32 100.0 33 ................................ GCCAGAAACCCTCCCCCTTCCAGATTGTTCCAG 131517 32 100.0 34 ................................ CCAAAGTCTGCGTTGCTGCGGCTGCTCTCCGGCT 131583 32 100.0 33 ................................ GTCAAGGGTAGCGGCTGCGCCGTTGATTGCACC 131648 32 100.0 35 ................................ AGTCATGCATACATCTGGACGCATTACCGGGGACT 131715 32 100.0 33 ................................ AAGACTCAGCTTGGTAAGCTTGCCTCCATCATG 131780 32 100.0 33 ................................ TGCATAACGGGGTGGAAGAACACTAATGAATAC 131845 32 100.0 34 ................................ TGGACACGGCCATGTCCCGCCTGGGCCAGACCTT 131911 32 100.0 34 ................................ GGACGGATTTGTCCTGGAAATTGAAGGAAATGGG 131977 32 100.0 33 ................................ AGAAGGGCCGATGCCGATGCCCGGTGCCGCGGG 132042 32 100.0 35 ................................ CGTTATAGGAGATCCGGCATCCGTTCAGACGCTGG 132109 32 100.0 34 ................................ CTCAAGGAAGTGGCGGTCGTACAGACTTATGTTG 132175 32 100.0 34 ................................ TGCATACTCCCGGAGCTGTGCCACAAAGGGTCCG 132241 32 100.0 34 ................................ AAAAACAGACCGCACCTCACTGAGCAAATCTAAT 132307 32 100.0 34 ................................ TGCATACTCCCGGAGCTGTGCCACAAAGGGTCCG 132373 32 100.0 34 ................................ AAAAACAGACCGCACCTCACTGAGCAAATCTAAT 132439 32 100.0 34 ................................ CTGAAAGGATAAAGTCATGCAGAAAAATAAATGG 132505 32 100.0 34 ................................ CAGTATCTCAAATGCTTTTAACAAGCTCATGGGT 132571 32 100.0 34 ................................ ATACCTTGCCGCAGACAAAGACCCCATGGAGGCT 132637 32 100.0 34 ................................ ATACCTTGCCGCAGACAAAGACCCCATGGAGGCT 132703 32 96.9 35 ......................A......... AGAACTTTGGGAAAAGTATTTCCAGAATCGTGCTG 132770 32 100.0 34 ................................ ATACCTTGCCGCAGACAAAGACCCCATGGAGGCT 132836 32 100.0 34 ................................ ATACCTTGCCGCAGACAAAGACCCCATGGAGGCT 132902 32 96.9 35 ......................A......... AGAACTTTGGGAAAAGTATTTCCAGAATCGTGCTG 132969 32 100.0 33 ................................ TGAGTTGGAAGAATTACTTTTAATGAAATTCCG 133034 32 100.0 32 ................................ GATGTCCGTCACAATGGGGATCATCATGCAGA 133098 32 100.0 32 ................................ CGTTCATAATGTTCATTGACAACCTCTTTTAT 133162 32 96.9 34 ..............A................. GTAGCGTCATCGATGCGGCCCATGGTGGCCTCTT 133228 32 100.0 34 ................................ TACCGTTTTGACTTGGTATTTTACCCAAAAATCA 133294 32 100.0 34 ................................ CTCAATATACAAACCCCTTAAGCCAACCAACAGC 133360 32 100.0 34 ................................ GTAGCGTCATCGATGCGGCCCATGGTGGCCTCTT 133426 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 75 32 99.8 34 GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Left flank : GCTACGATGTAAAAACTGCAGATATTGCAGGCAGAAGGCGTCTTCGCCGCATAGCTAAAACCCTTGAAGATTACGGACAACGCGTCCAGTATTCCGTGTTCGAGTGTTCCGTCGATCCAACCCTCTGGGTAAAACTGAAAAACCAGCTGTTAAAAGAAATCGAACCGCTGGAAGATAGCTTGCGCTTTTACTACATGGGAAAAAACTGGAAACCCAAAGTGGAGCATGTCGGAGCCAAACCCAGTCTGGATATGGATGGGCCTCTGATTTTTTAAGATTTGCGAGAGAGTAGCGGTCTGAGGCCATTGGAAAGAAACAGGCTGTCTTTTCAGCAACTAAATCAAAAAAAGCAAAAGATGTTCGCACATTAAAAAAACCTTTAGAAAACAATGGTTAAATTAAAATCAAACATTTTTTACTGGACTTTTAAGGTAAAAGAAAGGAGGTTCGCTGAAAGCTTACCTTAACTTGTTGCTTTAGATTATCTTTATTGAGCTACA # Right flank : CCCCACAGAACTTGTCCAACCTTTTAAAACAGAAGGCCATTTTCAGGAAAAAGCCTGGAAACACCTCATATCCAATCTCATCACAGACGGCATCACATATCATGAGGCAGATTACGGGGCTTCCAGTGCGGGATACATACAAAGGGCAAATCATGACATAAGGAAAGACGCAGAGGACAAAAGCGTACAGGTACTTTATCAGATCATAATCAACAGAAACCACACCAGAGAAGAAAAGTTTGCCACACTGGCCCACGAACTCGGCCATCTCTACTGCGGTCATCTGGGAAGCCCCAGCGATAACTGGTGGCCGGACAGAAACCTTAAATCAAAGGAAGTCAGTGAGTTTGAAGCTGAATCAGTCGCATGGCTGGTCTGTGAACGGATGGGGATAAAAAACCCATCAGCCCAGTACCTTAGCGGCTATCTCGATAAAGATAACAAAATCCCTGATGTCAGCCTGGAAGCTGTACTAAGGGCAGCGGGGATGGTGGAGGCCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //