Array 1 11486-19137 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFLG01000027.1 Shewanella xiamenensis strain DCB2-1 NODE_27_length_73477_cov_283.085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11486 28 96.4 32 ...T........................ TGATCATCCAAGGCCGCGACTTGTTTTCTAGC 11546 28 96.4 32 ...T........................ AGTCGCAGCGATAAAAGCGGCAACAGTTCCTA 11606 28 96.4 32 ...T........................ ATAGCGATACCGATAATGATAACGCCAGTCGC 11666 28 96.4 32 ...T........................ ACTACAAGTTACAATAATTCTTTCTCTTTCAC 11726 28 96.4 32 ...T........................ ATCTGGCGGACATTGTTCAGATGTTGAGGATT 11786 28 96.4 32 ...T........................ GTTAAGGGTAAAGCCTATTCACTTGGCATCCA 11846 28 96.4 32 ...T........................ TCAACGAGCGGAAGGCTTCAAACTCTCGCTAA 11906 28 96.4 32 ...T........................ AAGATGGCAAGAAAGTGATTGCTAGGCACTAC 11966 28 96.4 32 ...T........................ GCCTAAAAACGACACCACAAATAGGCCCACGC 12026 28 96.4 32 ...T........................ ATTAAACGAAAACTGATGTTCCAGAAGATCAT 12086 28 96.4 32 ...T........................ AGTCGATTTCTTTGATGGCTTCTACCACGCCC 12146 28 96.4 32 ...T........................ GCACATCAAAAAAATACCAATGTGAAGTTACG 12206 28 96.4 33 ...T........................ ATAAACGCGACGTACTTCTGCCGAAATGGCTGC 12267 28 96.4 32 ...T........................ ATTCGGGCCCTCAATATATGGTAGTTATACTT 12327 28 96.4 32 ...T........................ TCTGGGTGCTTAATGACTTGTGTTGCATTTGA 12387 28 96.4 32 ...T........................ AACCGCCTATCATGCGACCTATCTCGACGAGT 12447 28 96.4 32 ...T........................ GTTTCCGAACCTGTTCTAGTTGTTTCTAATGT 12507 28 96.4 32 ...T........................ ATACGCTAATTACTTTCATGTTGTCACCTCAC 12567 28 96.4 32 ...T........................ GATACGGCCACCGCTATGGCGCTTAAACTGTA 12627 28 96.4 32 ...T........................ TCAAGCAAACCTCAGTCACCAAGCCACCTACT 12687 28 96.4 32 ...T........................ ATCAGCTGCAACGTGTGCATATAATCCCCCAA 12747 28 96.4 32 ...T........................ AAATCGCCGCACTTGATGAATTTAGTGTGACT 12807 28 96.4 32 ...T........................ AACACCGAGCCTTTCTGCCTCAGGTGATGTTG 12867 28 96.4 32 ...T........................ CAATGCTCAAGGCGTGGTAAGTGGTGCAGGTG 12927 28 96.4 32 ...T........................ AGCATTTTGCAATGAGGCTTTAACAAGAGCTA 12987 28 96.4 32 ...T........................ ATGCCCAAATCTTTTGGCCCAGTTTCCATTTT 13047 28 96.4 32 ...T........................ TTTCTAGGTATCAATCAAGCTAATCGCTATTC 13107 28 96.4 32 ...T........................ TAAACGAAACTTTGTTGCTAGTATTAAATTGC 13167 28 96.4 32 ...T........................ TTGAGAGCCATCGTTAGCCGCGAGATCAACTG 13227 28 96.4 32 ...T........................ TTCCAAGAATGGCCATCACTACCGCCCTTGCG 13287 28 96.4 32 ...T........................ AGCTGCGCGGCGTGTCGATATTCCACGGCATT 13347 28 96.4 32 ...T........................ GTAGATAGTGTTAGGCGGCAGCATTGAATGCA 13407 28 96.4 32 ...T........................ TTCATATGGGGTCGGTAATGCGTCAAGCTCTT 13467 28 96.4 32 ...T........................ GGAGCGGGTTAGTTAAAATTCAGGTATAAAAA 13527 28 96.4 32 ...T........................ GCTTGAGGGGGTTTCAATTACAGCCAGCGTTA 13587 28 96.4 32 ...T........................ GTGAAGTGGAATTAGCCGCAGGCAGTGGTTCA 13647 28 96.4 32 ...T........................ TAAATGTGCTGGACAATCATTTACGTCACGGT 13707 28 96.4 32 ...T........................ ATACTGGCACTCACTGACTCAGATCTCAAGTG 13767 28 96.4 32 ...T........................ ACAAGCTGGTACTGCTGCCACTGTTCAATTCA 13827 28 96.4 32 ...T........................ AGATCTGATGGGGTGATTACACCTGAAGAGTT 13887 28 96.4 32 ...T........................ TAAGAGTGGATCACAAAACTTACCCACCAAAT 13947 28 96.4 32 ...T........................ TTTACCTCCAGCAGCACCGATCGACAACCCGC 14007 28 96.4 32 ...T........................ GCTGCGGGTTGTGACGAGGTTTTTACCGATAG 14067 28 96.4 32 ...T........................ TCAACGGTATCAGTCGGCAAAATAAACGCAGG 14127 28 96.4 32 ...T........................ ACGCTGTTTAGCTAAACGGGCAAGCAGCTCGT 14187 28 96.4 32 ...T........................ TGCACAAGGGTATTAATGTTCCAAAGCTTGCC 14247 28 96.4 32 ...T........................ GCGCAGGATGTGATTTTCGAAATCGAGAATAC 14307 28 96.4 32 ...T........................ GACTCCTGCGAGCACGAGCTCGTGCCAGAATT 14367 28 100.0 32 ............................ TTGTCGGTACGCCAATCTCGCTGCAGTTGCCC 14427 28 100.0 32 ............................ ATTTGTCACATGGTTTTTTAGGATGGGCGGTC 14487 28 100.0 32 ............................ TAGCAAAGCTGGAACCATTTTATTTACCTGCG 14547 28 100.0 32 ............................ CATAGCTCAAAGCCTGCATGCCACTCGGCATT 14607 28 100.0 32 ............................ AACATCCAAGTCAGCCGCAGCGGTCGCGTAAA 14667 28 100.0 32 ............................ ATTTGGCAGTGATACCCATTCATCACAGATAT 14727 28 100.0 33 ............................ CAATCGAGTATCGAAATTGCTAAGGCATATCCT 14788 28 100.0 32 ............................ TTAGAGAGCAATTCCCAAACAGGCACACCGTT 14848 28 100.0 32 ............................ ACTTGGCCCCAGCTGTTAACCTCAAGCCCTTG 14908 28 100.0 32 ............................ ATTGGCCCCTTGAGTACCAATAATCGCGGGCT 14968 28 100.0 32 ............................ AACACTGGCTGGTCGATTGCCAGCCGGATCTC 15028 28 100.0 32 ............................ TTTCGGCGCTTCGTCATTAAGGTTGCGCACCA 15088 28 100.0 32 ............................ ATGCAAATGGCCTCCGGCATTGGTGGCATTGC 15148 28 100.0 32 ............................ ATGCAAATGGCCTCCGGCATTGGTGGCATTGC 15208 28 100.0 32 ............................ TTGAAAAATGTATGGTCGATGCGGCTCGCTGG 15268 28 100.0 32 ............................ GTTAGAAGCGGCCAATTACAAGCGCAGGTTAT 15328 28 100.0 32 ............................ TAAAACAGCCCCTGCAAAGTCCGGCAAGGCCA 15388 28 100.0 32 ............................ GCCCAGGTGCGGGTCGTCCTAAGGGCGAACCA 15448 28 100.0 32 ............................ ATAGCGAAAAGGCATGCCAGTGATGCGCCCAC 15508 28 100.0 32 ............................ TAGGCTAAGGTGTGGCATCGGCATCGGTAGAG 15568 28 100.0 32 ............................ ACATCGGCAGGGCGAAAGTAAAAGGAATAAAA 15628 28 100.0 32 ............................ TATATCTCACCGTCAACAATAAAATATTAAAA 15688 28 100.0 32 ............................ CATTAACTAAGAGGCCCGCCACATCGGCAGGG 15748 28 100.0 32 ............................ ACGCTGGCCCTGTGCTCATTTCAAAATCTCCT 15808 28 100.0 32 ............................ ATGATTATTCCTTAGGATTAAGTTAATTAAGA 15868 28 100.0 32 ............................ GCATTGGCACGTTTACGCGCCTGATATTGCTT 15928 28 100.0 32 ............................ ATGCAGGGCAGCGAATCCGCCACCAAATACAA 15988 28 100.0 32 ............................ ACCAATGGATTTATCCATTTGCTGGGCGGCGA 16048 28 100.0 32 ............................ CCAGTAAAGCAGCGGGTAGGTTTTATCCGAGA 16108 28 100.0 32 ............................ AATGGAATAAGCAAACCAAAATAAAAAGCCCA 16168 28 100.0 32 ............................ TATTGATAAGTGAGCTTCATCAACAACAAACA 16228 28 100.0 32 ............................ TTGAGCGCCTAAGCGGTCAAATCAATTTAATC 16288 28 100.0 32 ............................ GTGAAGTGGAATACAACCGTCAAAACCACATG 16348 28 100.0 32 ............................ CATTGCTTGTTTTTACTTGAGGGTACTGTGGT 16408 28 100.0 33 ............................ GCTCAGTGATCCGTCTATCGCTTTGGCTTGGCT 16469 28 100.0 32 ............................ AATATGCCCTGTGAAGCAGGGATACCCACCAC 16529 28 100.0 32 ............................ TCACAAAACAGACGTTGCCTACACCACCCGCA 16589 28 100.0 32 ............................ TGCGGTTTCTCACTTTAATGAACCATTTGAAA 16649 28 100.0 32 ............................ TTTACCACCCCTGATTTATTAACCGATGAAAA 16709 28 100.0 32 ............................ GTGCCATTGGCGTGATTTAATGAAATTCCTCT 16769 28 100.0 32 ............................ AGTCACGGAAACTGCGCCAACACCTGAGCTTC 16829 28 100.0 32 ............................ ATCCACAAGACTCCGTATTCTGGCAAAAAACC 16889 28 100.0 32 ............................ TGGCGTCCCTGCAGTTGAAAACGAGGTTGCCT 16949 28 100.0 32 ............................ GTTTCAGCGAGCATTGATAAAAACACGGCGGC 17009 28 100.0 32 ............................ GCAATACCGCGAATTAACGGATGAACTTCCTC 17069 28 100.0 32 ............................ CAACGCCTTTGCAAGTTGAGCTGGCGAGAAAA 17129 28 100.0 32 ............................ ATGGTTTAATCTGTTAACTGTTCCACAAACCA 17189 28 100.0 32 ............................ TCATTGAAGTCCTCCAGTGGGTGATATTCGGC 17249 28 100.0 32 ............................ TGCAACCTGAATGCGGCGCAGCTGATAGCCGC 17309 28 100.0 32 ............................ TTTACCCAAATAACGGGCCCTATCACACCCGA 17369 28 100.0 32 ............................ GCGTTAGATGTTGAAGTTGAAGCGCGCAGAAC 17429 28 100.0 32 ............................ AGCAAATCCCAGTGCGCGCCATTGTTGCATGC 17489 28 100.0 32 ............................ AACCGGATCAACATAGGTCCCAAGCACTAATC 17549 28 100.0 32 ............................ TTTGATGCGGCTACTGACACAGTGTTCGTTAA 17609 28 100.0 32 ............................ GTTATCCCGTATCACTTCATTTTTTGCCGTCA 17669 28 100.0 32 ............................ TAAAGCGGCTCAAAGCCTTCGCACGGCGAAGC 17729 28 100.0 33 ............................ TTCATGGCCGTTTGCCATAAAAAGCGACAAAAT 17790 28 100.0 32 ............................ ATATAGAAGCACTGCGCTGTGCAATGTTGGAA 17850 28 100.0 32 ............................ TAACACAGCCAAACGAGCCACTAAATCATTGA 17910 28 100.0 32 ............................ GCTCTTTAGCCAGTTCGGCAACGTCCTCACAT 17970 28 100.0 32 ............................ GTTATAGACTTGCTGTTTTTGATGGCATGCAA 18030 28 100.0 32 ............................ GAGTTGTTGCCCAAGGTTAAAACCCTTAATCC 18090 28 100.0 32 ............................ ATTCCCAGCAGAAACAAAAGGCACAACATTAA 18150 28 100.0 32 ............................ AGTTTCAAAAGGTGGTAATAATGGGATATTAA 18210 28 100.0 32 ............................ ATTTTGTCCAATATCTATAGTTGCTGGAAAGC 18270 28 100.0 32 ............................ TCCAGAGGAAAAGCATCATCCTTTTTACAAGG 18330 28 100.0 32 ............................ AATGGTAAACATGGCGCAAAAAGCCTCAGATG 18390 28 100.0 32 ............................ AACAACCCAGAGAGCTGGCTCAATGCCCTGCG 18450 28 100.0 32 ............................ TGCTTGAGGCATTAAATAAGCAAGGCCCAGGT 18510 28 100.0 32 ............................ CGCCAGTAATCGCGAGTTCTGCCCGTGTACCT 18570 28 100.0 32 ............................ TGCGATAAGTTAGGCGACCCTATATCGCGTGG 18630 28 100.0 32 ............................ TGCGATAAGTTAGGCGACCCTATATCGCGTGG 18690 28 100.0 32 ............................ AAGAACATCGGTTTCGATACAACGAGCCATGA 18750 28 100.0 33 ............................ ATTGCTGCATAATGCGGTTGGATTCGTCTTGCT 18811 28 100.0 32 ............................ GTGAAAACCACATGGTGACCGCCAACGACCCC 18871 28 100.0 32 ............................ TGATGGGTACATTTCGCGGCGGCGTTTTAAAT 18931 28 100.0 32 ............................ TATATTCGATGGTGAACTAAAATGCCTACATA 18991 28 96.4 32 .....T...................... AAATGAAAGGTTTTCTGTGGCCTTTTGCACCT 19051 28 100.0 31 ............................ CGCGAGGACTAGGGCGCAGCCGACGGCTTTT 19110 28 78.6 0 A.....CA.T.C......G......... | ========== ====== ====== ====== ============================ ================================= ================== 128 28 98.5 32 GTTCACTGCCTTACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAACATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGCTTGAGTAGCAAAGCGAATGGACAGTCAATGTTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAGGTAAGTTTTAACCCTTTATTTTTTGCTCTTTAAAAATATAATTTAAATACAATAAGTTACAATGGGTGGTTTTTAATAAGGTAAAAAAGTAATTTTTATCCTAACTGCCTGTTGTAACTTATTTTTATTGATTTAGTCTATT # Right flank : AGCTAGCCAAGTTTTACTGTAGCTAAAGCACAAGTTTGATTAGTTGTTCGTTGAAGCGACCTAATAGCGTTAAGCCTCTTTAGTGAGGCTTTTTATTCGCTTTTTTCAACATACAGCTCACTAAAATCTTTCAAAAATGCATGCGCTGATGTGCCACAGGCAAGGCAAACCTGCTCAAGCTCTAAGATTTTGAGTTGACGCTCCCCGCTCTCGTACTTGGATACGAAACTTTGGGGCTTTTCTAATTTAAGAGCGAGCTCACTTTGACTGAGGCCTGCATTTTTACGCATAGCTTTCAATTCATTACGTAAGGCTTCTTCTCTATCCGACCATAACTTTTGTTTCATGGGCCGATAGTAGACGAAGTTGTAAGATATCCCATTTTGGGATATTTTGGTTATGTATTAGGGTTTCTAATATGAGTTTGGAGGTTGGTTATTGCATCAAATCTGACTGAACCAGTTGATGGGGTAAATCTAATATATTCTCTCTATCCGCTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCTTACAGGCAGCTTAGAAA # Alternate repeat : GTTTACTGCCTTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCTTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //