Array 1 87565-85774 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSIL01000006.1 Corynebacterium diphtheriae strain 5197 Contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 87564 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [87539] Deletion [87512] 87510 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 87449 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 87388 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 87327 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 87266 28 96.4 33 ..........C................. CTGGGGTCCCAGAGGGCGTCATCGCTCGTGTTG 87205 28 100.0 33 ............................ TTTTGAGCAACCCGCGCCGCGGCGCGGGCAAGG 87144 28 96.4 33 ..........C................. TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 87083 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 87022 28 100.0 33 ............................ TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 86961 28 100.0 33 ............................ ACGGGACCTATGCGGGCATTGATTACACCATCC 86900 28 100.0 33 ............................ ATTTGCGAAACCACCTCTATCTTCGGGACAGCG 86839 28 100.0 33 ............................ TGTTTTATTTTCCGCTCGTGCTTCAGCAACTAG 86778 28 100.0 34 ............................ CATAGGACTTCCCCTTCGAGTACATCCCCGCTGG 86716 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 86655 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 86594 28 100.0 33 ............................ GGGTTTTCATTGCTTTTATGCTGGGTGTGGCTA 86533 28 100.0 33 ............................ TCTGTAGGATTCTGCCCCTTTTCGCAGAAACAG 86472 28 96.4 33 .....................A...... GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 86411 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 86350 28 100.0 33 ............................ CCGTTGAGCGAGTGCACGATGTCGGCCCATAGC 86289 28 100.0 33 ............................ AAACGGGACGCTGTGACGGCGGGGCAGCATTCT 86228 28 100.0 33 ............................ AAATACACAGTGGAACCGAATCCAAGATCGTGG 86167 28 100.0 33 ............................ ATCATGTGAAGGTGATGGTCGAATGAGTGCCGG 86106 28 100.0 33 ............................ AGCTCGGCAGCAAGCAGCGGTCATGGGTGCGAC 86045 28 100.0 33 ............................ TGTCATCGCGTCCTGCCTAGTCCGCTAACTTCG 85984 28 100.0 33 ............................ TTCATGGGTGTATCCCCTCCTTCCCCCATGAGG 85923 28 100.0 33 ............................ GCAGCGAGGCGAGGGCGATACCAGCACTTATTG 85862 28 100.0 33 ............................ CCAGCCCTCATCCCGTGCGATAAGGGCTTTTAG 85801 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 30 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //