Array 1 13571-13183 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYP01000052.1 Vogesella fluminis strain KCTC 23713 sequence052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 13570 28 100.0 32 ............................ AACCCCACCGAAAAGCTTGGCGACCTAGACAT 13510 28 100.0 32 ............................ ATTGAGGCCGGCTATTCCAAGACGCGTGCCGC 13450 28 100.0 32 ............................ TGTGCCGGCGTAACCGGCACGAGCTGCCACCC 13390 28 100.0 32 ............................ GTCGCTTTCGGCGATGCAAGCAATGACTCCGA 13330 28 100.0 32 ............................ ATCGAGACACTCGGTCTGGATTGGGGTGACCT 13270 28 100.0 32 ............................ GATGAAAATGCCCAGCTCGCGGATGCGGGCGG 13210 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : CTGGAAAACCGGACCGGAGTTCGGCCCTGAAATTTACACCACCTTGACGGACGCTATCCGGCAAGC # Right flank : AGAGTGACAGCCTCGCTCTGCCACGCCGGCCGCTCAAAAACCGGCCCGTGCGGCTTGCTGCCCTTGATGTTTGTACAAAAAGGCAGGCCGTGGTGCTGGCTTGCCTCAAGCCCGCCGCCGGCTTGCTTTATAATGCCGCTTTTGTTGACGGGCGGTGCGCAGGCGATGTCGGTTGGTCATTACGAGAATTTCCCGGTCGGTTCCCTCCTGCTGCCGCGGCGCATGCGCCGCGCGGTGCACGTGATCTATCACTTTGCCCGTCATGCCGACGATATCGCGGACGAGGGCGACGCCCAGCCGGCGCAAAGGTTGGCCGCATTGCAGGCGCTGCGCGACGAGCTGGCGCGCATCGAGGCCGGCATCGCGCCGCAGCTGCCGCTGATGCAGGATCTGGCACGGGTGATCGCCGCCTACCAATTGCCGCTGGCGCCGTTTTACGATCTGCTGTCGGCGTTCAGCCAGGACGTGACCAAGACGCGCTACCAGGACTTTGCCGAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 112198-114928 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYP01000006.1 Vogesella fluminis strain KCTC 23713 sequence006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 112198 28 100.0 32 ............................ ACCGAGGGCGACCGGCTGCGCATCAACGGCGC 112258 28 100.0 32 ............................ TGCGAGCTGGCAGAGAAGGTTGGCCGCGAAAT 112318 28 100.0 32 ............................ TACTACTTCGCCCACGAAGCCTTCATTGATGC 112378 28 100.0 32 ............................ TTGGAATGCACGCGCCAGTACAACGTGGGGTC 112438 28 100.0 32 ............................ ATCTTCCAGCAGGCGCAAGCGCCAGCCGCCGC 112498 28 100.0 32 ............................ ACCGGCGCCAAGCGATGGGAAAAGTCGAAGAC 112558 28 100.0 32 ............................ CTCGAGAGCCGGCCACGGTGGTGCCTTCCATT 112618 28 100.0 32 ............................ GTGCTTCGCGCCCCAAATGTCCGGGGCGGCTG 112678 28 100.0 32 ............................ ACGGTACGCCCACAAGATCGCCACCCATCGGC 112738 28 100.0 33 ............................ GCTGAGGTTGTGCGCGTCATCCAGAAACACCAC 112799 28 100.0 32 ............................ ATTCGGCTTAACTCGCTCCCGCCAGTCCTCAA 112859 28 100.0 32 ............................ TCTTTGGCCCCCATCATCGCCGCCCATGCCGC 112919 28 100.0 32 ............................ TTCACGGATTTCCCGCAAAACGCAGAGGACTG 112979 28 100.0 33 ............................ AGACCGAAATCCCGGAACAGCCGACGCTGCAAT 113040 28 100.0 32 ............................ AGCAGCGCGCGCACGCCGGCGGGCCGTTGCAT 113100 28 100.0 32 ............................ GATCGACGTCGACCTGGGCGACGGGCTGGTAA 113160 28 100.0 32 ............................ GCCTGCTGGACAAGATCGACCCCGGTCATTGC 113220 28 100.0 32 ............................ TTTACCAACGCCATGGTCAACTTTGGCGAGGC 113280 28 100.0 32 ............................ AACTGCCGTCAAGCCGGTTGCTGTCGTAAAAA 113340 28 100.0 32 ............................ TTTTGCATTTTCCAAGGATGCCAGGTTCAATC 113400 28 100.0 32 ............................ TTGCCGGAGCTGCGTCTTGCCTTCGCAATCTC 113460 28 96.4 32 A........................... TTAACGAACGTCACGACGGTACGCCACAAGAT 113520 28 100.0 33 ............................ TCGCCCACCAGATGCGCCCCGACCTGGAGCTAA 113581 28 100.0 32 ............................ TGCTGGCCAAGGGTCATGAGGTAGAGGCGGAT 113641 28 100.0 32 ............................ GGCTGGTCAAGACCGAAGCCCAGCCAGGCAAG 113701 28 100.0 32 ............................ ATGCTGGAAGATGCTGCCTACCGGCGCTTGAT 113761 28 100.0 32 ............................ AATGAAGCACTTCACTGTGACAGTAACGGAAA 113821 28 100.0 32 ............................ ACATCCATGCGTTCCGCTACGCTGCAGTTCCT 113881 28 100.0 32 ............................ CCGTTACTCGCCACGGTAGGCTTGGCGATTCC 113941 28 100.0 32 ............................ TACTGCGGATGAAATGGAAGGCCGCGACGTGA 114001 28 100.0 32 ............................ TGCCCGACATGACCTACCAGTCGCGCGGCGCG 114061 28 100.0 32 ............................ ATCGAGCAACTGGAAACCGGCGCCGCGAACAT 114121 28 100.0 32 ............................ ATTTCTGATTGGGTCAAATTCAGCCGCCGCCG 114181 28 100.0 32 ............................ TCGTCCGCGATGCCGGAGAAGGTCTTCTTGAT 114241 28 100.0 32 ............................ TACGGCGGCATGGCTGGCCGCCGGCTGCTGCG 114301 28 100.0 32 ............................ TGGTACAGCACCAGCTGGAAGGCGTGCTGTTT 114361 28 100.0 32 ............................ TCAACAGCTACTTCGGACTACTCAGAAATGTT 114421 28 100.0 32 ............................ TGCCAGCGCAGTGGCCGGATGGTCGGCTGGTC 114481 28 100.0 32 ............................ AATGGCCGGCCCCGACCCACGCACACCGAGAC 114541 28 100.0 32 ............................ TGGAGGAAGTCGCCGATGAGTCGATGGGCGTG 114601 28 100.0 32 ............................ AACAACAATGCGGTACAGGAATACCTGTTCGT 114661 28 100.0 32 ............................ CGCAATACGTCTTTGTAATCCCCACAGATGAT 114721 28 100.0 32 ............................ TGCACCGCATCCCGGTACGGCGTCCACATGTC 114781 28 100.0 32 ............................ CAAGGCAGCGGGAACTTCTGGGTAAAGAAAAC 114841 28 100.0 32 ............................ TGTTCAGCGCGCTGCACGTCACCACCCAGCAC 114901 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 46 28 99.9 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : GCCGGCATGCGCGACCATGTCACGCCGGGCCACATCCTGCCGGTACCGGCTGCGGCCAACCTTGTCCGCGTACAGCGCAAACAGGCCAAAAGCAACCCGGCCCGTGAGCGTGAACGGCTGATGCGGCGCAAAGGCGTGAGCGAAGCCGAGGCGCTCAGGCTGATCCCCGACGACAAGGCCAAATGGCTGGACTTGCCATACCTGACGCTGACGAGCCATAGCACCGGCCAGCGCTTCTTGCTGTTCATCGTGCAGCAAACGGCAACGCAAGCGGCCAGCGGCGAATTCAACGCCTACGGCCTGAGCCAGACCGCTACCCTGCCGGCGTGGTAAGCCAGAGCCTTGCGGCCAACCTTCAACGTTGGCCGCAACCCTTTTTCTGGCGGGTATGGCTAGTTCTTTAAAAATCAGATGCTTAGGGGGTTGCCCCAAAAAAGGGTTTTTAGCTGTAAAATCGCTGCACACCTTGCCAGCCAAGGCAAACAGCCGGAAGGCCTCTA # Right flank : GTCAGCGGAAGCGCCAGAAAGCTCGGCAAGCGATAGAGTCCACGGAAGTGGTGTAAATGCAGACAGATGGTAGGAGGCCATCGACGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //