Array 1 1432-674 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEI01000025.1 Streptobacillus canis strain IHIT1603-19 NODE_25_length_24892_cov_35.704906, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1431 36 100.0 38 .................................... ATCGTTTCAATAGCTGTTTTAATTTTTTTCGTTCCTAA 1357 36 100.0 34 .................................... AGACGTTACAGTAATAGAAAATATTATTGTAGAT 1287 36 100.0 36 .................................... AAACTACTCCTAATGGTAAAGCTAATAAGAGATTTT 1215 36 100.0 36 .................................... GCTAATACGTATAAGTTTGCTAATTTTTTCATTTCT 1143 36 100.0 37 .................................... TTGAAGAAAAGTGTCTTGTTATGTAAGACATCTTTGG 1070 36 100.0 37 .................................... ATCACTAACATTTATATAGTTAGTTGCCAACATTGGT 997 36 100.0 36 .................................... TATTAATACCTTTAATGGAAGAAATAAGATTAGGAG 925 36 100.0 35 .................................... TTATTCCAGTAGTTATATAATCCTACTGTAGTTTC 854 36 100.0 36 .................................... GAATTTTCATTTTTAACTACCTCCTTGATTTTCTTT 782 36 100.0 37 .................................... GAAATATCGATTCTAAAACCATCATTTATTTCAGGAC 709 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 100.0 36 GTACGAATGTATATCCAGTAGAATAAGGATTGAAAC # Left flank : GTGCTGTTGCTTCTATGGTAAGTTCAAAGGTTACAGAAAAAATTTATGAGGGAGCAACTAAAGTTGCCACGACTATATATAAAAGTGCTGTAAATACAATTGAAAGTGGGGTAGAGACTGTTAAAAGCGTTGCAAAAGGATCTGTAAATTTTGCAGGTAAAATTCTATCTAGTGCAGCAAGTGCAGTTTCAAGTGCTGTAAGTGCAGTAAAAAGTTTTGTGGGAGGATTAACGGGATGGTGGTAATAAGGATAAATATATATAGCTTCTCGTTTTATATTTTCTTTACTTATAATTGTATTAGAAAAGGATTAAAATAAGATAAATAATATATAGAAAACTTGAAAATTCAAGGAAATGTCATTTTTGGTATTTAACATATTATTGTTTTTTTGAATAAATAAACAATAAAAATGCTCCTCGTATTAAAGTGATATTTAGTTGTAAATAAAAAAATAATATGTTAAAATTAAGTAAATACAATAGCTAAAGAATTTTAGT # Right flank : TATAAAAGAAAAAAATTTAAAAAATGACGTGACAAGCTATTATTATTACGAAAATAATAAAAAAGAAATTATGATATGTACCCTCTTTACTGGACAAACCAGTAAGGAGGGTATTTTTGTGCGTTACAGTTTTAAATTTAGAAAGAAATGTGTTGAAATGTACAAAAAAGGAATTTATCCAGAAACACCAGATGGTTTACGAACGAAAAGGTTTAGAGATAAAATTAGACGTTGGGTATTACTTGTAGATCATCACGGAATTGACATTGAATTTAATACATCTTCAATAGATCTAGTAGATAAGTTTGTAGAAAAATTTGATGATAAATATTAAGTATAATGAAATTTATTTAGATATAAATGGAGGAAATAGAATACATGGATATGCATTAGTTTATTTGATGATTAATCTTATAGAACTGAATAAACTGAATTTATTTTTAGTTGAATTAAAAAATGGGATTGTAAATGTTAAGTAAAATAACTTATTCTTAAATAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGAATGTATATCCAGTAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [83.3-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 128372-129860 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEI01000002.1 Streptobacillus canis strain IHIT1603-19 NODE_2_length_130303_cov_38.349020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 128372 36 100.0 30 .................................... AAATGCATATAATTTGTATCATTAAAGTAT 128438 36 100.0 30 .................................... TAAAGTTCCTAATACTGTGTACATAATTTC 128504 36 100.0 30 .................................... GGACTCTTGAAGACTTTGAAAAATTTGATA 128570 36 100.0 30 .................................... AATGATAATTCAAATAGGACATAAAGACTT 128636 36 100.0 30 .................................... GAGATATGATAGATTGATTTTAGACCCTAT 128702 36 100.0 30 .................................... TTTTTCCATTTATTCTCGAGTTTCCATTAT 128768 36 100.0 30 .................................... TTTAATGCAATTAAATGAAGATATTATCAA 128834 36 100.0 30 .................................... CATTTTTCTTTTCTTGTTCCTCAACATATT 128900 36 100.0 30 .................................... GGTTTATAAGCATATTCTATATTATTCTTA 128966 36 100.0 30 .................................... ACAAGACACTTTAAATAAAAAGGGAATAGA 129032 36 100.0 30 .................................... AAAAAGCATTATTCACTGGTTTTTACTTTT 129098 36 100.0 31 .................................... GCCGAGAATCAAAAGGAGATAATTAAAGCTA 129165 36 100.0 30 .................................... GTTTCAGTAGTTTTATTTATGCTTTGATTA 129231 36 100.0 30 .................................... AAAAAAAATGAATAAAGCAATAGTTTATGC 129297 36 100.0 31 .................................... CTATGGTTATGATAAAAGATTCAAATATGGA 129364 36 100.0 30 .................................... AGACCACACTATAACAAAAGAGAATGTTGT 129430 36 100.0 29 .................................... TAAACACCATAAGAACCTATAGAAACAGG 129495 36 100.0 30 .................................... AAATCAAGAGCATCCCATTGAGCCCAAGTT 129561 36 100.0 30 .................................... AATGGATGATGATTTATATTCTTTAAAAAA 129627 36 100.0 30 .................................... CAATTCGCCCCTAAAAAGTTTGAAAAGGTA 129693 36 100.0 30 .................................... TTTTAAATCTTTCTACATTTTCAAAATCAT 129759 36 100.0 30 .................................... GTTTTATAGGTGCATATTCATTTCCTACAG 129825 36 88.9 0 .............................T.AT..T | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.5 30 GATACAGATTCTTAGTAAATTTGAATAATGTGAGTG # Left flank : CTTTTTAGAAGATGGAAATGAAAAACTGGCAATACCTGAAATAATTAAAATAGATTTTTATGATCTCTTTAAAGAGTTATAAAGAAATGAGATTACTTGTTTATTTTGATTTGCCAGTTTTAACAAAATTAGAAAGAAAACAAGCTCAAGATTTCAGAAAAAATCTTCTATCTGAAGGTTTCATTATGATGCAATATTCTTGCTATTCAAGATTTTGTAGAAATGAAGCAGAATGTTCTAAGTATTTTAGTAGGGTTAAAAAATTATGTAATAGGTTAGATGGTGGAGAAGTAAGAATATTAAGAGTAACAAATAAGCAATATGAGAATATGATAGTATTAGTAAAAGAACCTAAGATTAGTGAAATTAAAGTTTCAAAATGTCCATTAGTTGTTTTTTGATAATGTGAATGTGAATTTTGTTCTAATGGATTTTGATTAATTATTCGGATTTGAATTGTATCTTCTAGTAACGGAATTATACTAATTTCGTTGCTAGAG # Right flank : TGTAGAGTTGTTGCATTTTTTTGCAACAACTTGTTTGATTCAACTTTCAACTTTTGCTTCATAATTGGTTGTAAACTAGTAGTTGACAACCACGTTGTCTGTGTTAATAGTAAGAATGTAAGATTATGACTAAATAAGAATGTAGGACATTAGTAAAATTTAAAAGGAAGGAGATAGAAATTCAAATATGATTAAATAACTATAGTATAATATTCTTTTAGTAACATCGATAGGAGAATATGATATGACTTTAAACTTAATAAATAATATTGAAATAAATACTGTTATGGATTTATACAAAATAAAGAAAATAATAGAAGCAGAAGCTATAGAAAAGGTAAATTATTCAGAACTAGGTAGAGAACTTAATAAAGATCCAAGGACAATAAAAAAATATATACATACAGACACAGAAAAGTTAAAAATTAAGAAAAGAATATTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTAGTAAATTTGAATAATGTGAGTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 3552-4305 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEI01000001.1 Streptobacillus canis strain IHIT1603-19 NODE_1_length_163207_cov_35.154507, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 3552 36 100.0 36 .................................... TATAACATATAAGAGCGATCAAAATACTGATGATGT 3624 36 100.0 35 .................................... TCCTCATTCCAATTACATGGAGCGGGATTATGTGC 3695 36 100.0 35 .................................... TCCTCATTCCAATTACATGGAGCGGGATTATGTGC 3766 36 100.0 36 .................................... TCATATACAATATCTTCAATGTGATATTGTATTTCA 3838 36 100.0 34 .................................... GATGCTGATAAATCTTTAGAAGATACTGCGAATC 3908 36 100.0 34 .................................... GATGCTGATAAATCTTTAGAAGATACTGCGAATC 3978 36 100.0 36 .................................... TGCTTTTTTCGCATCTGAATATTTGTTCATTGACTC 4050 36 100.0 38 .................................... TGTATAAAACTCAAATGAAGATTAAAATGAACATTATA 4124 36 100.0 37 .................................... TGGTAGATACTTCTTCCCATCGCTGAACTTGTCTTTT 4197 36 100.0 36 .................................... ATTTCTATTTCGAATACTTTCTCTTTCATTTTATTC 4269 36 94.4 0 ...............................T..G. | G [4299] ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 99.5 36 GTACAAGTCATATTCCAGTAAAATAAGGATTGAAAC # Left flank : TATGCTTAAAGCTCATTATGATAATATGAAAAATACTTTAGATTTTACTTATTTAAATACACAAAACGCTGTATCTTTACGAGGGAAATTCTTTATTGGATTTATAGCTCAAATATTGTTAGATTATGTTGTTTCTAAAGTAAAGTATTTTAAAAAGAAAAAAGAAATTTTATCTATAAAAAATGATTAGTATATTAGAAAATATTGTTTTACTAAATAATAATAATAATAATAATAATAATAATAATAATAATTTACTATTAAAACCACTTACAAGTAAACAAAAAAATATAATAATTGGATTAGATTGATCTATTGATGATTTTTGAAAAACTTGGACTTTAAAATTTAAGTTTTTTCTTTGTATATTTTTTAAGGAATTTATGTTTAAAAATAAAATTTTAAAATATAAAAAGCAAAACAGTTTTATTATTTTTTCCTTGATTTAAAAATATAGATGTGCTAAAATTAAGTAAATATAATACTTGTGAGTTTTAACT # Right flank : CTATACTTATGGATACCTTTTTTTGATCTGTTAATTTTAACAGGTCTTTTTTTGTTCAGTAAAAAATGAACAAAAAAAATTTTATATATTAGTGTTTATGTTGAAATTTTAAAAAAAATAGGAACAAAAAAATAAGAACTATTTACTTAATACTGTTCCTTTAAAAATAAGATGAATTTATATAGAATATAAACATAAAGGAAATGGAGGTATTGCATGAAATCAAAATCATATATAAAATTGTTAATGAAAATAGGCCAAGATTTAGATATAAATACTAAAGAAAAAATAAGTAGAATAGAATTATTAATTATTAAGTGTTTAGCATTAAAATATTTAAATCTAGAAATTGTAGATGTAGAATCTTTAGAAAAAGATAAATCTAATATATTGAAAATAATAAATTTATTATGGTACAAGATGCATGGAGAAGAATACATAGAATTAGATGATAGAAATTACTTAGATTTTAGAATAAATTTAGGACTAATACTTTATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACAAGTCATATTCCAGTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 27315-27631 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEI01000001.1 Streptobacillus canis strain IHIT1603-19 NODE_1_length_163207_cov_35.154507, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================== ================== 27315 31 100.0 41 ............................... GAAACACTTGTTTTAAAAATGGTTTAAGTATTTTTAATGAT 27387 31 100.0 40 ............................... GAAACACCCTCATGAAAGAGTTTTCGAAAATTAAAAGAGC 27458 31 100.0 39 ............................... GAAACAAAACTCCTGCTAATTTTTTAGTAAAGGAAATAT 27528 31 100.0 42 ............................... GAAACTGCTATTCCTTGCCCTTCTTTGAATGTATATGAGTAA 27601 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================== ================== 5 31 100.0 41 GTACGAATGCTATTCCAATATAATAAGGATT # Left flank : GAAAACCCCAAAACTATATCTTGTGCTGTTTTAGGTGCTTTTGAATATGATATTACTTATTTTGGGATAAATTTTAAATTAGATGTGTGTAATGAATGTAATAGTGAAGGTGTATTTGATCAGGAATGTCCATTTTGTTCTTCTACAAATATAGATAGATATAGAAGAGTATCAGGATATATTTCTTTAAAACAAAATCTCTCAATTGGAAAAGCAGCAGAAGAAAAAATAAGAAAGAGTAATTTGATATTAGAAACAGGTGATTAGTTTTTTAAAAATTATTGAAAAAATTATAAAGATTAAGGATATAAAAATGATGTGTATAGATTGTGTTGTAAAAACTACTGAAATTCAAAAATTATACTTAAATACATTTTTGAACGAAGGTAGTTTTTTCTTTTGAAAAAATAAAAATGATTTTTGTTTTATCAAAAATTTCTTGTTTTTTCAAAAAAAATGTGATAGAGTTAAAGTAAATACATTGCTCTCAAACAGTAAGT # Right flank : TTTTTATTTGGTTGTTCTTTTTTTGAAAAATTAATAAGAGAAGATTGATGAAAAAACATAATAAAATCATAGTTTAAATTTTGTTAGGACTGTGATTTTTTTTAATTATTGTTCCTTTTTTAAATTAAAAAATAATGATAGTATATATGTATAAATAAAGAAGGAAAGTGAAAAAATATGAAGATATTAGATTTGAAAAAAGAAGAAAAAGAAGATTTGAAATCTTTGTTAAAAAAAATAATATTAAAAAAAGAAATAGAATTTGATTGGTTGGATCTAAGTAATAGATATAATAAAATCAATGATTTAAATGAAAATGAAGAAGAATTTTTAGAAATTTCATGCTATAACGATTATTTAAATTCTGACTGTATTTATGAAACAAATATATATATTAATGATAATCAACTTTTTATTGAACATAAAGGGAAAAAATATATATTTGATGATTCTGATACAATTAAAGAAGCGTTATTATCGATTGAAGATGCATTAGATTT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGAATGCTATTCCAATATAATAAGGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //