Array 1 8728-11609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUP010000168.1 Limosilactobacillus reuteri strain SM_1_4_1 scaffold168, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 8728 36 100.0 30 .................................... TGTACGAAACGAATAAAAGAAAGCCTAGCC 8794 36 100.0 30 .................................... TTAGTGGACGGCGCTTGGCCTATGGTTATT 8860 36 100.0 30 .................................... TATTCTCGTACTCAGGGGGGTCCAAATATA 8926 36 100.0 31 .................................... ATGGAAAGAATGCCCAACACAGTAAGCTTCA 8993 36 100.0 30 .................................... CAACCGCAAAAAGCCTGAAAAACAACGGCT 9059 36 100.0 30 .................................... GCTAAATCGTCCGCGACTATTAAAAAGCAT 9125 36 100.0 30 .................................... CTACTAAGAGTTCTAAGACTATGCGTCACT 9191 36 100.0 30 .................................... CACTTTGTAAGTCAACCTTCGTCATATTGT 9257 36 100.0 30 .................................... AAGACTTTGGAAAGATTGGACGAAGCATAG 9323 36 100.0 30 .................................... ATGCAAGACTTTCTAAGTGAAGTTGAGCGA 9389 36 100.0 30 .................................... TACACTTAAATACTGATTTATTAATGACTT 9455 36 100.0 30 .................................... TAAAGCTGAGGGAAATACGGCAGAAGCTCA 9521 36 100.0 30 .................................... GAAAGCGAGGATGATTAAACATGGCTCAAT 9587 36 100.0 30 .................................... GAAGTAACAATGTTATTATAATAATGTAAG 9653 36 100.0 30 .................................... TAAACACGGGTTGCCCATCATTGCTGACGG 9719 36 100.0 30 .................................... AGCCATTGCCACCCAGCTCCTTTACGTTTT 9785 36 100.0 30 .................................... CTGTCATAAGAAGACTTGTCTGGGTCAAAG 9851 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 9917 36 100.0 31 .................................... TTTAACCTAACAGTTACCACACCAAGTGACG 9984 36 100.0 30 .................................... TGATAATATTATCATAATCAAATTCTTGCA 10050 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 10116 36 100.0 30 .................................... TACGCTCATGGCTAACCCCTGCTTATATTC 10182 36 100.0 30 .................................... ACTAAAGTGTTTCCAAGCTTGGCTACAGGA 10248 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 10314 36 83.3 38 ..............................NNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 10388 36 83.3 30 NNNNNN.............................. AAGATATTGATATTTATAACGAATTATTAA 10454 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 10520 36 100.0 30 .................................... ATGGTGTGCTGTTTCAATTTGGTAATAAGA 10586 36 100.0 30 .................................... AAACACACCAATGAATATCTGTTAGAGCGG 10652 36 100.0 30 .................................... TTATTTTGACTTTTTACTAGCTTGCAGTCG 10718 36 100.0 30 .................................... TAAAGAGTGGTAACGCTATGCAGTCTGCTA 10784 36 100.0 28 .................................... AACGCGCGCAAAACCGTAGTAACGCAGA 10848 36 100.0 30 .................................... TGCTACTATGAAGAAAATTCGGAACTTGGC 10914 36 100.0 30 .................................... TGCTGTTAATCCCGTGGATGGGGATGCTAG 10980 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 11046 36 100.0 30 .................................... TCTACCGGCGGATGACGATTGTTGAGCCTT 11112 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 11178 36 100.0 30 .................................... GATCAAATTAACAATGCAGTACGTTCTATT 11244 36 100.0 30 .................................... TCTCGATGACAGTGGTTAATTCCCTCGTTA 11310 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 11376 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 11442 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 11508 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 11574 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ====================================== ================== 44 36 99.1 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //