Array 1 295489-294793 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAA01000007.1 Reichenbachiella agariperforans strain DSM 26134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 295488 36 100.0 30 .................................... TGCGCCTGAATCGTAATTGGTTATGTCGAT 295422 36 100.0 30 .................................... GCCTCATCAAAGCACACTCCGCAAAACTTA 295356 36 100.0 30 .................................... ACGTATCTGTCGTTATGTAATATTTGCATG 295290 36 100.0 30 .................................... GGAGTTACTTTACTGGAATTCACTAGTACA 295224 36 100.0 30 .................................... GGGAATTGCTCATACTTTTCCTCATTGTTG 295158 36 100.0 30 .................................... GATCACTGAATCGTATCTCCTTCTTAAACA 295092 36 97.2 30 .....A.............................. TCCTTATTAGTATTATAGTTGGAAGTTTCA 295026 36 97.2 30 .....A.............................. TAATACGTCGGGGTAGTGAATCCGTGGGCT 294960 36 97.2 30 ..................C................. TACTAAGTTTATCATGAGTTGTCTTTTTTA 294894 36 94.4 30 .....A............C................. TGTTAGTCGTCGGTCTTCCATTTCAGTATT 294828 36 94.4 0 .....A.....................G........ | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.2 30 GTTGTGACTGCTCTTATTATGAAGGGTAAAAACAAC # Left flank : CCAATCTGTCCAGTTCACCAAGGTAGCCCTGAAGCTGGAAGAGTATTTCATTGCCAAAAAATCAATCACCCTACAAATAGCTAGACAGATATCATATTCCGAAATTGCTGACTTGTCAAACTACTTTACTGACGAAGTAAGAAATACAGCCTTTCACTTCGACGTTCCAGAGACGGCTTACAGCATGATTCTCCAAGGCATAGAATCGGAGTTCTTGGATAGGGAAATAAAGCCCCAAAAACCGAAAAGCCTATCTGAGTTGAGTACGCAACAAGTATCGGTGTGCACGGCATTTTTGGAAACCCTGCACAATAACCTGTTCGATAGAAAAGATGATAAAAAAGAACGGCTAAGCAAAGCCCGCGAGCGCTACTTTGAACAAATAAATTAGAACCTGATTAAATTCGCTCTTTGACCAACTGATCATGCAAAGCATTTGCTGTTTCCTAATACTGGAACGGCTTTACCCTGATGAAAAACAGGGAGTTGACACGACATGG # Right flank : TATAATTCAAGGAGGGTTAATAAAAAACTCCCTGTCCGGTACCACCAGACAGGGAGTTTTTTAGTAAAAAGTAAGTTTGAAGTTCACTTATGACCCATCATTCCTTGGTCGTTATTATTTCTTCATTAATGGCTTTGTCGATCACGGCTTTTAGCTCCAGTAGTTCGGTCTCACTAAAACTATTGGAAGACAACCATTTGTCATCCTTTTTGTAGATTTTTTTCACTTGAAAATTTTTCCAAGTCTTTCCATCCTTTCGTGTGTTGACCCAAACTGTAATGACAGCCGACCCTACTCTATACTCCGTTTTAGGCTTTTTTCTTCGCTGTTCTGTTTGCTCTTGTGCTTTTAGCTCCTGCGAAAATCCAACGACCGAAAGTGTCATTAGCAAAATTATTGTCAATAGTATTCTCATTCTTTTGATGTTTTTCGTTCTAAGTTTTGATTGTAATCTTGTACTGGTCACTGCTGTCTGTAGGGCAACAGTGCATTAAATAATC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGACTGCTCTTATTATGAAGGGTAAAAACAAC # Alternate repeat : GTTGTAACTGCTCTTATTATGAAGGGTAAAAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 7282-6999 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAA01000011.1 Reichenbachiella agariperforans strain DSM 26134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= =========================================== ================== 7281 39 100.0 43 ....................................... GCAAAGCGATGACTCTTTTTTTAACTCTTTTGATTATCTATCC 7199 39 100.0 41 ....................................... GCAAAGCGATGACTCTTTTTTTAACTCTTCTCTCATTATCA 7119 39 92.3 43 ....C.......................G......T... CGACATAGTGATGTCTCTTTTTTTACTTCTTGTCTCATTATCA 7037 39 94.9 0 ....C..............................T... | ========== ====== ====== ====== ======================================= =========================================== ================== 4 39 96.8 43 AAGATACGGGATAATACAGGTGGATTAAAAAGGGTCGTT # Left flank : GGATAAGTTATTCATCTCTATCCGTACGGTAGACGCACATCGTAATCATATCATGCAAAAACTGAGCATGAAGAGTACTGCTCAACTTGTAAAATATGCTATCAAAGAAAAGATTATCGATCTGGAATAGACTGATAGTCTGCATTTTCGTCTAAAAGCTAGGTAATTTTCTTAATACCTTTTCAGGCTTGGTTATATATGACTAAGCCTTTTCTATGTCTAGTGAGATAGCTTCAATCTTTCTTTTGTAAGAGTTGTTTGTATTATTTTAATTAATGTTTAAATAATGCAATTTCCGACTTCATTTTTCATCTTTTTTCTTGTTTTTATTACTGATACTCCTAAAATATTTTTTACGAGTATCCTCTATTTTTTTAGGCTTGGTTTCCATCTACTTTTGAAATGTGGTTAAGATATAAACAAAGTCAAATCACAAACTCCAAACAAGATCTGGAGATTAGCTAGAAAGAATTACACTAGTCACAAAGGGGGCTTTTTAT # Right flank : CGATAGAATAGCCTTTTTTTATGTCCATACGCTAAAGTTCCTTGGCGATACATATATTTGTCCACTAACAAGTAACGCATGCTCCACGCCAAGAATATTCACAAATCTTACGGTGATCTGGAAGTCCTCAAGGGGATAGATCTACAAGTCAATACCAGCGAAATCATCTCCATCGTAGGAGCGTCTGGCGCGGGAAAAAGTACGCTGCTACAGATACTAGGGACACTAGATGTGCCAGATCAGGGCGTGGTGGAAATCAATGGCAAAAACGTAGTTGGATTGAAGCCCAAGGATTTGGCATCCTTTCGAAATACGCAAATTGGTTTTGTGTTTCAGTTTCATAATCTGCTACCTGAGTTCACGTTATTAGAAAATATTTGCATGCCTGCCTATATTCAAGGCAGGAGGAATCAGGAACTGGATGAGTACGCGGCGTACCTCATGAACTTGCTAGGAATACAAGGACGCAAATCTCACAAACCAGCACAAGTATCTGGAGG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGATACGGGATAATACAGGTGGATTAAAAAGGGTCGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.54%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //