Array 1 264634-264375 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFZW01000003.1 Pantoea agglomerans strain CFBP13505 P0403, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================== ================== 264633 31 100.0 26 ............................... AGCTTTCTGTGCAACTGGTTTAGCTA 264576 31 100.0 26 ............................... GGCTTTCTGAGTGGCTGGCTGAGTGG 264519 31 96.8 26 .........................G..... GGCTTTCTGAGCAGCTGGTTTAGTAG 264462 31 96.8 26 .........................G..... AGCTTTCTGTGCAGCAGGTTTTACCG 264405 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================== ================== 5 31 98.7 26 CTTTTTTGTGGTGAACTTTTTTAGCAGCCTG # Left flank : AGGTTGCCGCTTTCGGTTTCCAGCTGACCAATGGCATCCCAGGGGGCAGCGGTAATATCGGTGATTGCCTGGCGATGATCCTTACCGAAAAACAGCATCTTAATTTCAGCAGGAGTAGGCGAGTCATCGTCATCATCGGCATGAACCGTGGTGGCAAAGCTGAAGAGTCCAACCATTAACAGGGTAGCCAGGCGCATAGAAATCTCAATGGCGAGAAAAAATTAACGTTATTGTTATTACGTAAGTACGGTAACTATAGTCGGTGAGCGTTGAAAAAGGGAGTTTTATTGGTTAATCAGTACGCTACAGCGGTTAAACAAAAAAGCTTGCTGCAACAATGCCACACAGGATCATCACCAGCAGAATAATTTCGAAGCGATAGCGACGCACCATATCATCGACTCCAGTAAAGAAACACCCGGCAGAACCGGGTGTTTTTAATCATCATCTCGTGGCCGTGCGCTGAAGGCGACCTTAGTTTTTAGCTGCTGGTTTCACAA # Right flank : CGCTTTCTGCGCGGCATCTTTTTTCACAGCTTTTTTGTGGTGTTTTTTAGCAGCCTGCGCTTTCTGAGCCGCTTTATGGTGTTTCTTGTGCGCAGTTTTGTGAACGGTTTTAGCCGGTGCTGCAGCGGTAGTAGTGGTTGTTGCGGCTGGCGCAGCAGCTGGAGCAGCTGTGGTGTCAGCAGCGAAAGCAACAGAAGACATACCCATAGCAGCGGCGACAACCAGTGCAAATAATTTTTTCATTGCAAATCCCTCGAAGACTATTTTTTCATGTGTAGCCCACTGCGGGGCCGGTGAAGAGACTATAGGGATATCAATGAACGGTGTCCGTGGGTGTTTGGTATCGGCGTGTAACCGATTGTACAAAGGCGGGAAAGGGCGGTCAGCTGACCGCCCGAGAGCTTAGCTATTCAGGTAACGTTGTTCAAGGTGCTGGCGGAAGAAAGCCGGATTCAGCGCTTCGCCGGTGGCGTTGATCAGCAGCTGATCGGTAGAGAAAC # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.27, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTTTGTGGTGAACTTTTTTAGCAGCCTG # Alternate repeat : CTTTTTTGTGGTGAACTTTTTTAGCGGCCTG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 93318-93653 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFZW01000009.1 Pantoea agglomerans strain CFBP13505 P0409, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 93318 29 93.1 33 .............T.......G....... CCTGGCAGCAGCAGCCGATGCTGCTGAAACTGC 93380 29 96.6 32 .............T............... GCCATTACTGATGCACTGGAGGGATTCCATGT 93441 29 100.0 32 ............................. CTATTTCAGCAGGTGACAGGTAGGACATTTGC 93502 29 100.0 32 ............................. AGTCTCAATTGTTCGGCAGCGTCGTAATCTGT 93563 29 100.0 32 ............................. CCGTGGTGTTGGCGTTCTGCTGTGACATGTTG 93624 29 89.7 0 .........A......A.......C.... | A [93645] ========== ====== ====== ====== ============================= ================================= ================== 6 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGGCATTGGTTGATGTTGATGTCATTCGCTTGCTGGGCGGCTCTGAAAAAATCAATGTCACTTTACCCAGGTCGCTAATTGATCGGATTGATCGTTGTGTGGCTTCACACCCGGAATACAAAAGTCGCTCGGGCTTTCTGGCTCAGATAGCGCTTGAGCGTATTACTGCTCCGATTAACAGGCCTCAAAAGTAAGTCTGCGCGATAGCTAAATTTATTGGTGGCAGAAGAATCAAAAGGCACAGTTTATGAGTTTTTACCCCTTCAGCCGCTGCCATGATCTTTCTCACGTATGGTCAGGTTAATGTCTTTAATGATGCTTTATCCTGATTGATAAAACCGGTGTAAGAATGCATATTCCGGTGAATCTGGATGGACTGCGGCTGATTCTCTTCCTGACTCTTATAAATCAGTGAGTTACTGATCTTTAAATACGTGAATTTAGTGGTGATTTTTTATGAGGGTAAAATCATCATATTTTACAGCTATATATGTTAAGA # Right flank : GGCAGTTCGCCGCCGATATTATTTTCCAATGCCCGGTCTATCCTTCACAAACCACGACTAACCCTTCATCTAACCACGCATCTCCCATGCAGCCACCCGTTCAATAAACATCTGTGCCAGTGCAGCAATGGCGCTGTTGCCGGGCAATCTCTCTTCGTTCATATGCATCACCAGCGAACTACTGCGTCGGCGGCCCTGTAACAGCGGCAGTGGACGGAGCTCACCGCTCTCTAACAGTGCGGCGATATTCTGTTCCGGCAGCCAGCCATAACCTAACTGATGCTGGACCGCTTCAATGGCTGCCGACAGCGTCGTGAAGGACCAGTTTTCCGCCTGATCGCCATTGACCTCTGACTGCTGCTGTTGCTGACGATCCAGAATGGTAATGCAGGGCCAGCGTGCCAGCGTAGCAGCACTAAGCGGGGCGGATTCACGATGCAGCGGGTGGTCGCGATGGGCGACGGCGACGAAATCGACACTCATCAGGCTTTCGCCTGCTA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //