Array 1 39837-45348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZZ010000007.1 Novosphingobium sp. BK349 Ga0365280_07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================== ================== 39837 32 100.0 34 ................................ ACCACGATCTCGGCCAGCGAGTGGGAGTCGAGCC 39903 32 100.0 35 ................................ GTGGCTCCAGCGCCGCCAGAACGCCGCCAAGCGCG 39970 32 100.0 35 ................................ CCTGCTGGCCTGGGCGTCGTCGTCGGCGCTGTGTC 40037 32 100.0 35 ................................ ATCATCAGTGAGACGGGCCATAATCAGGCGTGTGG 40104 32 100.0 34 ................................ AGCCCCTGACCCTAACAACCTTGCCTTGCACCCC 40170 32 100.0 34 ................................ GTCTATGTGGCGCTCGCCGCAAACCGGACAGGTA 40236 32 100.0 33 ................................ GGCGCACAGGCGGTGGATCCAGTCACCCATGGC 40301 32 100.0 35 ................................ CTCAACCCGCCCGCCACCGAAGAGGTCGCGGGCGT 40368 32 100.0 35 ................................ GTCACGCCGTGCTGGCCGTTCCCACGCTACGACTT 40435 32 100.0 34 ................................ CGGCCCGGTGCGCGGGTAAAAGCCCAACATCGCC 40501 32 100.0 34 ................................ CTTGGCCAGGACCACGGCGGCGCCCTTGCCGGTC 40567 32 100.0 34 ................................ AGCGTATCGGTCCCACCGACATAGCTGATGCCGA 40633 32 100.0 33 ................................ GGCAAAGGCATGTCGATCGAGCCCACCGACCCG 40698 32 100.0 36 ................................ AGCGCGTTGAGGCGAACGTATCGCAAGCGACGGCAG 40766 32 100.0 36 ................................ GCGTCAAACAAAGCGCTAACTTCGCTGCCGCCCACC 40834 32 100.0 34 ................................ TGCGCCCAATGCAGGCGCGCGTTCGGGCTTAGCC 40900 32 100.0 34 ................................ GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 40966 32 100.0 34 ................................ GTTGCGGGGGAGCTGGGGCAACCTTCCCCACCCC 41032 32 100.0 35 ................................ CTGGTGTCGGGCAGCATCGGAATCGAGGCCAAGGT 41099 32 100.0 34 ................................ GAGGGCAAATGCGCCTATTGCCCAAACGATGCCA 41165 32 100.0 35 ................................ ACGACATAACTGGGGGAGACCAGGCCTATCGTTTT 41232 32 100.0 36 ................................ AGCTTTCAGCCCGACCGCTGGCTGGGCGACGTGGCC 41300 32 100.0 35 ................................ ACTTGCGAGGCAAAAGGTTCTGCGCGCGTCACCTT 41367 32 100.0 34 ................................ CACTTTTGATGGGGCTGCGTTTCGGCAAGCGGCA 41433 32 100.0 34 ................................ GGATAAAGGGACAAGGCGGCGTTTGGCCGTCATC 41499 32 100.0 34 ................................ AAGAACAATATGCGGTTTAGCGGCATCCTCTCGA 41565 32 100.0 34 ................................ GACGATCAGCGCATGCGCGGCGATGTGATCGAGT 41631 32 100.0 35 ................................ TGGGAGAAGCGGGCCGATCCGGTCATCACCCTGGA 41698 32 100.0 35 ................................ TGCGATTACCCAGCGCGTGGAGAATTTCGAGCAGC 41765 32 100.0 34 ................................ TTCATTGGCTTGGGCGTCGGCCACGATGCGCTCA 41831 32 100.0 35 ................................ ATCGAAATCGACGAGGACAACAACGTCTCGATAAA 41898 32 100.0 35 ................................ GGCAAGACCGTCGCGATCACGTCTGGCCTGACGCC 41965 32 100.0 34 ................................ TTGGCGTCCTGCGTGATCGCGGGGCGGCCGGCGC 42031 32 100.0 35 ................................ ACGCGCAGTGATTGCAGGGATACGGCGCGATGGCG 42098 32 100.0 34 ................................ ACGGCGTGGTGTTGCGCGGGCCTGGTCTGCGCGG 42164 32 100.0 35 ................................ AGCGCGTCGTCAATGCGCTGCCACAGATCGGGGCG 42231 32 100.0 34 ................................ CTGTTGCTCACACCCGCACCCCCGACCCCCTGCT 42297 32 100.0 36 ................................ ATCGTCGGGTTGGCGATCAGGAATGCCACGAAGGCA 42365 32 100.0 35 ................................ TCCCGCTCCGCGTAGGCCTGTGTGAGGGACGCCAT 42432 32 100.0 34 ................................ CTGTGCAGGAAAAAGGTGGGAATAGTCGGGGTAA 42498 32 100.0 35 ................................ GTCACGCCGTGCTGGCCGTTCCCACGCTACGACTT 42565 32 100.0 35 ................................ CCGCTGGATCCGGCGTGCAGCAAGTGGGCGCCCTC 42632 32 100.0 34 ................................ GGTGAACTGGGTGCCGACATAGCCGACCTGCACG 42698 32 100.0 34 ................................ CCGTTCTACACGCTGCCGTTGTCTGCCCAGGTGA 42764 32 100.0 33 ................................ GATTACGAAGCGCCCGAAACCACCACCATGACG 42829 32 100.0 35 ................................ CGCGACCTGGCGACATGCCGCGCACCAGACGGCCC 42896 32 100.0 35 ................................ ATAGAGCATGGCAATCGCCCCGTCGGCATCTTCGT 42963 32 100.0 34 ................................ ACCTCGTCAATCACCGCGCTATAGTCGTCGTCGT 43029 32 100.0 34 ................................ TTCAAGGCGTTGCCCAACTATATGTTCGACCCGC 43095 32 100.0 34 ................................ GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 43161 32 100.0 34 ................................ TCGTACATCGTAAAGCCCCCAGCCCAGCAGGATC 43227 32 100.0 35 ................................ GCGCCCGAAAGGCTGCGCAAGTGGAGCGAGAACAA 43294 32 100.0 35 ................................ TACCGCGTGCAGGTGGAAGACTTGACGATTACCGG 43361 32 100.0 34 ................................ CGCCACATGATTGCCGCCGCGCCCCGCGCCCGGC 43427 32 100.0 34 ................................ AAATTGAGTTGCAGCGCTCACTGCTGGGGGAAGT 43493 32 100.0 33 ................................ GTGGCCAGGGGCTGAACGATCTCGAAATCAATC 43558 32 100.0 35 ................................ TTCGGACAAGACGCCGCGAACCGCAGCATCAATTG 43625 32 100.0 35 ................................ ACGCTCAACACGGGCGTGGTTGATCCCCTCACGCA 43692 32 100.0 33 ................................ CATTTTCGACGATCGGCATAATTGGGTGAGGGC 43757 32 100.0 33 ................................ TGCAACTCAACTGGTTGCTGAAAAGTTGGCAAG 43822 32 100.0 34 ................................ TGATCCGATTGCACGGCGCCTTGTATCACGTCCG 43888 32 100.0 35 ................................ ACGCAATTTGTGGCGGCGTTTGAAATGGTGGGGAG 43955 32 100.0 34 ................................ TTACTATCCGGGGTTATGCGGGTCCGAACGATAC 44021 32 100.0 34 ................................ GTCAGCCAGCGTTGTGCGCGCGGCCTGAGTGGCT 44087 32 100.0 34 ................................ AGAAATGGGTTCGTCCGCTGCCGCGTGCCAAAGT 44153 32 100.0 35 ................................ AACGGCAACGGAGAAGTTGCACACTTGATCGTCGT 44220 32 100.0 34 ................................ TGCGCCCAATGCAGGCGAGCGTTCGGGCTCAGTC 44286 32 100.0 34 ................................ GGGATGTGGAGCATTTAGGCCTCCACCGGTTCGG 44352 32 100.0 35 ................................ TCACACCTCAAACGCCCAACGAGGCAGCATGACCG 44419 32 100.0 34 ................................ GAGCGACTGGCGCGCGCCAAACGTGCGCTGATGC 44485 32 100.0 33 ................................ TGCCTGATGCTGAGCCCGAGGGCGTCAAGCCCA 44550 32 100.0 34 ................................ CACATCCTGCGTGGCCTGGCCGAAGTGTTCTGCG 44616 32 100.0 68 ................................ ACCGCGCCCGATCGCGGGCTTACCATCCGCAAGTGTCGCCCCCTACCGACAATGCCCTGGCGAGCCTC 44716 32 100.0 33 ................................ CCGCAACGGCGTCTCGTCGTGCTCAAGGACTAC 44781 32 100.0 34 ................................ CAGCGCCTCGACGTGGTTGCGCAGGCGATCATCA 44847 32 100.0 35 ................................ ATTTGCAAGACCGTAGCGAATTTGCCGGCCATAAT 44914 32 100.0 35 ................................ GCGCGGGAGTATCAACGCCTGCATGCCAATTTCGC 44981 32 100.0 35 ................................ ATGCGCTTGATGCCGGCAACGAACCGGCTGATGCC 45048 32 100.0 36 ................................ CAGACCTGTGTCGAGGTGATCGATCCCGACCGGCTG 45116 32 100.0 36 ................................ GAGCAGTGGCAGCGCAGCCTTCTCAGCCTGCGCGCC 45184 32 100.0 35 ................................ ACAGGCTCGATCAGCGGGACGACCTTGACCGTCAC 45251 32 100.0 34 ................................ TGCGCATAGGCCAGCGCCCGGGCAGGGCCTTCAT 45317 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================================================== ================== 83 32 100.0 35 GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Left flank : AGGCGATGCTGGTTTTGATCACCTATGACGTGAATACCCAAGACACGGCCGGCAAGCGCCGCTTGCGCCGCGTTGCCAAGGCATGCCAGGATTTTGGCCAGCGGGTGCAGAATTCGGTGTTCGAATGCGAAGTGAACCCGGCGCAATGGGCTGGTCTGAAAGCGGCGCTGGCCCGCGAAATCGCGCCGGAAAAAGACAGCCTGCGCTTCTACCAACTCGGCGCGGCTGGCAAGCGCCGGGTGGAACATATCGGCGCCAAGCCAGCACTCGACCTGGATGGGCCGCTGCTGTTTTGAAAGGCGGACGGGACAAGCTTGGGCATCGGCGCGAACCTCTAGCTGCCCGCAAAACACTGGCATGTTCGCGGAAGCGTAACTGCATGAAATATAGGAATGCGCCCGGTTTCCGCCAGTAGCAGGCTGTTTCGACGCTCCTGCGGTCGAGTGGTTCGCGGAACACGGGCATTTTCCTGTTCTTTGTCATCGTGTAACGCAAACCCA # Right flank : CTCCTCGGGTGGCGCTAGTAAGGGGATCGACCACCGTCGCTCGTCAAGGAGGTGGCCGCAACCGGCTGACCGGTCGTCTTTTGTGTGGGGCGCGAATCGAAACCGGTTCGTCTGCTGAAAACCACACCAGGGTAGAGCAGTCAGCCAGTCGTCGCCGCACCACTGCCGATGAGGCAGAGCGCAACAAGGCGGTCATCGACGAAAACTGACCCGTAATAGGAGCAAGTAGCCAAGAGCCTGCCCGGCGCCATTGGTTTTGCTACCCCGTTGATATCGTCGACTGCTGCATCGCATCAAGCCGCTGCGAAACGGAGGTGCCCTGTTTTTACTGTCAACCGCAAGCAGTTCGTCGTGAATCTCGAGCGTCACATCGATCTAAGGAATATTGGGGGTACAATTAGGGGTGTCACTAAACTGTCTATAAAAATTACAAATAAATTTAATTGTTTAAGTGGTTCTGAATTGCTACCCAGATCCTGCCCCCGCAACCATCTCTCAAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 55354-55020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZZ010000005.1 Novosphingobium sp. BK349 Ga0365280_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55353 29 100.0 32 ............................. CTTCTTCATGTGCTCGATCTGCTCGACCGGCA 55292 29 100.0 32 ............................. AGCGCCGTGCAGGTCTTGCCGCCCCACTGCCC 55231 29 100.0 32 ............................. ACGGCCCCGACCTACACATTGCCCACGATTGC 55170 29 100.0 32 ............................. GTGCCGGTATAGGTGCCATCGGTGCCGCCGCT 55109 29 100.0 32 ............................. GTGAGCGCCTGATCCATGGCTGACCTTCAAAC 55048 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTTTCCCCCGCACGCGCGGGGATAGTCCC # Left flank : AAAGTGTTCGCCACAGCCTCAGTCGCGCAGCATGGCAACCAACGGCGCCACTTCGGGCCTTTGCCGCAAGTCGGTGCGCAGCAAGGGCGCTGTTTCGCGGGTGTGCCCAACCAGGCGCGCGCCGGGAAACTGCCGCAACCAGAAACCCCGGTTGGCCTTGCCCAGATCGTGCAGATAGGCCAGCACGCACAGCCGCGCGACATCGTGCGCGCCCAGTTCCCGCTCCGCCGCGCGGTTCAGCAAGCGTTGCCAATGCCCTTGCGCCACCAGTTGGGCAAACACTGCCGCCACATCGCCGCCGTGATCCGTCAGCGGCAGGGCTGACCGATGCGCCAGCTCATCAGCCAACTTGGCCCAGGCGCGTGGAATGGGGCTAGACATGCCCCCCACTTTGCCGCGAAACAACGCTACCCGCCACCCGCTTTTGCACAAGGGTCGACGGCACCGCTTGCACAATGCGTCGGCTCTTTCCCTTTGTGAACAGAATGTTGTATAGCAGG # Right flank : AGCAATGGCGTTCCGTCGCCGACCAGATGCGTCCGAGGCTCCCAAGACTGGCGACTTTGATGGACGATGCCGAACCCGATGTCCTGGCATACATGACCACCCGTTTAGAGTTGGATATCCCTCTTACCGGCTGTCCAGCCGATCCAGCCAAGCTTGCGCCTGCTTGGGCTCGCCTACTGCATCCGACTTGACAGGCCCACGAGATGCGAGGAATTCCTGTTGAAGCGCGAAAGGCGGCATGCCGAGCTGCTCTCTCATTTGGTCGATCGCCTGACCGATTTCAGCCAAATTTTCGATGATCGGGGCTACAGCCTTGCGCGACCAGCGGTCTGCGTTGTGATCAAAAAGGCCCCATTTTCCTGCAGCCGTAACGCGCAAGGCATCAATCAGCGCTGCCATATATTCCGTTTCAAGTTCTGTACGACGAACGTCGAGGCGTTCCAACCTATCAGCCTTTGCCATCCTTTGATTGGTATATGGTCACGCCGCTGTCCGCAACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCACGCGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 64184-64577 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZZ010000005.1 Novosphingobium sp. BK349 Ga0365280_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64184 29 100.0 32 ............................. CGAAGAAGCGGAGGCCTGACCATGGAACATCA 64245 29 100.0 32 ............................. ATCATGCGGCCGATCACGCCGGCGCCGCCGGT 64306 29 96.6 32 ..........T.................. GCATCCAGCAGTCGAGCGAATTCCTCTCCTCG 64367 29 100.0 32 ............................. TCGTCCGATCGGTGCAGCGGCGTCATGAAGAA 64428 29 89.7 32 ..........T...T.........A.... GGGGAAAGTCCGGCCTCGGGCATGGCGCGCAT 64489 28 89.7 32 ....-.............A.....A.... GCCTCCCGATGCGCCCGATAGTGATCGGCCAA 64549 29 72.4 0 .............CA.......C.ACATT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 GTCTCCCCCGCACACGCGGGGATAGTCCC # Left flank : CGTGGCCGAAGCGCGCGGGCAGCCGATCGAACGGGTGGTGCGCCAGCGCGCCGCGCGCCTGTTCCGCCAGCGCGGAATCATTCCCACGATGATCGACCAGATCAAGAGCCTGCTGGCCCAGGCGGACGAGGCCAGGCCCTGATGCCGCTGGTCGTGGTGATCACCCGCGACGTGGAAGACCGCTATCGCGGCTACCTCGGCTCGATGATGCTGGAACTGGCGCCAGGCGTCTATGCCCAGCCCCGCATGTCGGCCCGCGTGCGCCAGCGCCTGGCCGATGTGCTGGCAGACTGGCACGGCCGCCTGGGCCGGGGCAGCATCGTGATGTGCTGGGCCGAAACCGCAGCCAACGGTGGCCTTGGCCTGCGCACGTTCGGCACGCCGCCCAAGGACGTAGTGGCCCATGACGCGATGTTGCTGGTGCGCCGGCCATTACCGGAACAGCCCGAATCCCGGTGAATTTGCTCTTTCCTATTGTAAACAAGATGTTGTATAGTAGG # Right flank : TCGCGCGTCGCGCAGTATCCGCCATGCGGCGCCCCCTGCGTCTTGCCCAACTCCCCCTTGCCCGCTGCCACGCAGCGGTGGCATGAGACGGGCATGCCTGCAGATCTTTTCCGCGCTCGATTTCACGCCGTTGGCCAACGCGGTTACCGGCTTGCGCGAGGGGCTGGTGCGCTTTGCCACCGATGAAAGCGATACGCAGATCCGCGACGGGCTGATCCAGCGCTTTGAATTCACCTATGACCTTTCGCACAAGATGCTGCGCCGGGTGATCGAGGCGGGGGCCGCCAATCCCGAAGAGGTGGGCCGCATGACCTTTCCCACTCTGATCCGCACAGCGGCCGAACAGGGGCTGACCGGGGCGGACTAGACCGATTGGCGGACGTGGCGCGAGATGCGCAACATCGCCTCGCCCATTGCGGCGTCGCCACCTCAGACAGAGCACACCCCGTATCCGTTCGCCCGCGCTAACTGCCAGAGTAGCAATGAATCGGGATACACTT # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACACGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //