Array 1 1154295-1154581 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014151.1 Clostridium botulinum strain BrDura chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 1154295 28 100.0 36 ............................ TTTGCTCACTTACTTTACTAATAATGTCATTATAGA 1154359 28 100.0 36 ............................ TAATCAAGATTTAACCATTCTTTAGCTTCTCGTAGT 1154423 28 92.9 36 .............AG............. TTGGAAAGCTTACTAGATTTCTTACCTATATCGGGT 1154487 28 92.9 37 ......A............C........ AAGTTAATTCTTTTGAATTTAATATCATCTGTTACAC 1154552 28 89.3 0 ......A......A.............A | TA [1154574] ========== ====== ====== ====== ============================ ===================================== ================== 5 28 95.0 36 TGAACATTAACATGAGATGTATTTAAAT # Left flank : TTATAACAATTGCAGGATCAGGAATATTGTATAAAAATTATTTTACTAATATTGATTCAAATAGCTATTTATCAAGCAAAGATGAATCTGAAAGAAGTATTTTCTGTCATGAAGATGATAAAAGCAGTAAAAATACCCACAGTTTTGATTTTAAAAAATTCGATGGCAAGTGGTCTTTAATGGAATTTACATCAAGTAAAGGCAAGCGGTAAATTTGATGTAAGTGTAAATTCGGATAGAAACATAGATATTTCTCATATAGATTTTTTTGATTAATTATATGCACTGATGCTATGAATAAAAACAAAAAAATTCTAAAAGTTTTTCCAACCGCATTTAATTTTAAAACCTATCCTAAGCATTGCAATATAAGGCTTAAGATAGGTTTTGTTTATGTTTTTCTGAAAAATCACAAATGGCTGGAAAAATTTTTTTAATCATTGTAAAATCAAATGCTATATGCTATTCTTAAAATTAAGGAATGGCTAATTTACTATGGA # Right flank : AATGGTAGTTGTAGCTTATGTTATAGCTATTATTTTTCAATATTTAGAGGAATATTTTTACATATGTAGAATATTTGTATATAGTCCCTTTAATTCATTATCAAATCTTTCTTGAATAAAAAGGAGCCTGTGTATGCAGTGGGGGCTCCTTTTTTATATTATTTGAAGGAATTTTTTAACATTTATAGAATATTAAATATAACGGCTTCCCAATAGGTTGATTATAGACCTCCTTGCTTAAGCAAAAAGAACCCCAATAAAAAGGGGTTCTTTTTGTATGGATTTATATATTGGTGCTATGTATTGGTCTATTTTTACTATATCCAGATGTAGAAAAGTTAATCAGTAAGAAATATATAAGATGTAAATTTTTAAATATATTTCTATAATGAGAGTACCTTATTTTTTATTTTTTTGATAAAAATTTTAAGAAAATTAGCAATTTATTAATAAAAATTTAAAATAATTATTTAATTTCATTTTAAAGTTGTATCAGAATG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 2321921-2321629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014151.1 Clostridium botulinum strain BrDura chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2321920 30 100.0 35 .............................. TAATTTACGTCATGTGTTTTGTAAGAGTTTAGCAG 2321855 30 100.0 35 .............................. GTGGATATGAAATTACCTTATCATTTGTTGGATGT 2321790 30 100.0 34 .............................. GATTATATTAAAAGATTTAAGTACCTATATAGGC 2321726 30 100.0 38 .............................. GACAGTATAACTTTTGATTCTTATTATAATTTAAAAGT 2321658 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AATCTATTATGTCATATGTTAGTTGAACAGTAACATAAGATGTATTTAAATTATAACTAATTCAGAGTATAATCTCTTACAAATCGTTGAACAGTAACATAAGATGTATTTAAATTTATAACCGCTTGAGAATGTGGCTATCTTGAATGGAATGTTGAATAGTAACATAAGATGTATTTAAATGAAGAAATGAAACAAGCGGCCATAAGTGCTTTAGGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AGAGAACCCAAATCTACGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTAGGGATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGTCAGGTTTTTAGTATTTAAAGGGAATAGATAAAATAGTTTTTTGTAGTTATGTAAATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 2322923-2322174 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014151.1 Clostridium botulinum strain BrDura chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2322922 30 100.0 36 .............................. AGCCCCATTGCTATTTGTGCAGCATTAATGTTCCCA 2322856 30 100.0 35 .............................. GCTACATTGACCTTAAATGTTCTATTTGCATATTC 2322791 30 100.0 36 .............................. TACTCAAAGTGATGACTCTTTTAGGTCGTATAAGTT 2322725 30 100.0 34 .............................. TACATTTTCATAAATCCAGTCGCCACTTTATTAG 2322661 30 100.0 34 .............................. TAAAATGATAGAAACCTATATTCATTCCTACTGC 2322597 30 100.0 36 .............................. AGCTTAATAAATCTTGTATTTCTAACATCTCAATTT 2322531 30 100.0 36 .............................. GTTTTTCCACAACCTGTTTGGCCACTTACTAAAACA 2322465 30 100.0 36 .............................. TACTTGATGTGTAATAATCTATTATGTCATATGTTA 2322399 30 100.0 34 .............................. TATAACTAATTCAGAGTATAATCTCTTACAAATC 2322335 30 100.0 38 .............................. TTATAACCGCTTGAGAATGTGGCTATCTTGAATGGAAT 2322267 30 96.7 34 ......T....................... GAAGAAATGAAACAAGCGGCCATAAGTGCTTTAG 2322203 30 86.7 0 ........A......G............GC | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 98.6 35 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTACAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGCTTTTCTTATATATTTATAAAATATTATAATCGGTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATTAATTTACGTCATGTGTTTTGTAAGAGTTTAGCAGGTTGAACCTTAACATAGGATGTATTTAAATGTGGATATGAAATTACCTTATCATTTGTTGGATGTGTTGAACCTTAACATAGGATGTATTTAAATGATTATATTAAAAGATTTAAGTACCTATATAGGCGTTGAACCTTAACATAGGATGTATTTAAATGACAGTATAACTTTTGATTCTTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //