Array 1 681-112 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYUX01000013.1 Bifidobacterium pseudolongum subsp. globosum strain 2002B Contig_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 680 33 100.0 34 ................................. TCCGGCCGCGAAGGTCGATTTGACCGAACGGTTG 613 33 100.0 34 ................................. ACCGAGGACCTCGAACCCGAACCAGACGATCTGG 546 33 100.0 34 ................................. ACATGTTACACCAATTGGAACACAGAAACGAAAC 479 33 100.0 35 ................................. CAGCGACGTGCGGTCGCATGGGTTTTCTCGCTTTG 411 33 100.0 34 ................................. AAGATCCTGGGCTACATCACGACCGACGGCCAGC 344 33 100.0 33 ................................. CGTAACCATTGCGACGGCCTCGACATTGATCAA 278 33 100.0 35 ................................. GGGTATTGTTCGACCGGGAATTGGCTCATGAACTT 210 33 100.0 33 ................................. AGATCAAGATTGCCTCCCCAACCATTGAGGCGT 144 32 87.9 0 ...................-....TT...C... | A [117] ========== ====== ====== ====== ================================= =================================== ================== 9 33 98.7 34 GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Left flank : AACGTCGCCAAGACATGCATGCGATTCGGGCAACGGGTTCAGAATAGTGTATTCGAATGCTCGATTGTGCCAGCTGACTACTTGATGCTGGTTTCAGATTTGCTGGAGATCATCGATAGAGAGAAAGATAATCTGCGCATCTACAAACTCGGCAAGAATTATGCAAGCAAGATTGAGAGTTATGGGCGCAATCTACATATGCCATTCGATGACGTCATGATGATTTAAGCATAGACACTTATGGTTGAGGGGCGTAGTGATGCGAGGGGGATGCTGTCATGATTTCTCCGTAGGCTCGCACTGAAAGCGCTAGATCTATACCAGAGATTTCAACCGTATTGAGCGGATGTTGTTTGATAATTCAATAGTGTTTTCCACAATCCGGATTCAGTTCTGAGATATAGTAGTTAAGCATCATTCAGTATGAGTTTTCTGCGATAGAATTCAGACTGAACGTGAGCAAAGTGTCTGGAATATGGATCATTTTGTTCATTTTTGCA # Right flank : TTTGCGTTCCGCATTGTGAGCAGTGTTTTTCAGCAGGGTGAGCAGCGGCTTTTCCGCATGGTCGGCGGTATTGCCGCTGCGCGCTGGTTTTTGGGTTATTTGGTCATGAGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //