Array 1 10763-14694 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNSZ010000014.1 Lactobacillus delbrueckii subsp. lactis strain FAM 24851 FAM24851-i1-1_scf14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 10763 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 10824 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 10885 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 10946 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 11007 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 11068 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 11129 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 11190 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 11251 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 11312 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 11373 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 11435 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 11496 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 11557 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 11618 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 11679 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 11740 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 11801 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 11862 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 11923 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 11984 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 12045 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 12106 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 12167 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 12228 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 12289 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 12350 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 12411 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 12472 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 12533 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 12594 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 12655 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 12716 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 12777 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 12838 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 12899 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 12960 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 13021 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 13082 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 13141 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 13202 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 13263 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 13324 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 13385 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 13446 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 13507 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 13568 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 13629 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 13690 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 13751 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 13812 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 13873 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 13934 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 13995 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 14056 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 14117 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 14178 28 100.0 33 ............................ TTATACGCGTTTCCGTCGGTAATGCAAGCATAA 14239 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14300 28 100.0 33 ............................ CTGCCAACACTGCAGACTTACATGATCTGCTGG 14361 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 14422 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 14483 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 14544 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [14566] 14606 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 14667 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //