Array 1 1853182-1852491 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LS483313.1 Staphylococcus simulans strain NCTC11046 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1853181	    36	 100.0	    29	....................................	TTGAAAGAAAATATATCAGCAACACAGAT 	
   1853116	    36	 100.0	    30	....................................	ACTTCCTAATTCTTTTATTCGTTTATCATA	
   1853050	    36	 100.0	    30	....................................	GAGGTTTTTAAAAGCAAGTGAGCAAAACGC	
   1852984	    36	 100.0	    30	....................................	TCTAATGATTCCTACACGAGTAATGGAAGT	
   1852918	    36	 100.0	    29	....................................	GTTGAAGCAGTTAGGTACAACATACGACA 	
   1852853	    36	 100.0	    30	....................................	TTCGTATTTAACTCTTCCGTCGCTCCAACG	
   1852787	    36	 100.0	    29	....................................	CTTCCTACGTGATTTACATTCTTGTTTAG 	
   1852722	    36	 100.0	    29	....................................	TTATTTCAATGACAGAGGGTCGATACAAC 	
   1852657	    36	 100.0	    30	....................................	TGAAGCGGAACAATACGCCGAACAGCTAGG	
   1852591	    36	 100.0	    30	....................................	GATAAGTACCACAACAAATCACTAGAGTTA	
   1852525	    35	  88.9	     0	...........G................TT..-...	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.0	    30	GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC	                              	       

# Left flank :   AATATTGTTTTGAAAAAGTTGCTTGGCATGTTTAAACCAGACTTTCATAATGATTTAAATGATTTAAATGCGATAGAGCAACGCAAATTATTTATAGACACATTAACATCAACAGAAAAAGAAAATGTGCTGGTTTTGTTATTTCCTGAAGCTCATTTAGGGCTTTCGGATATGAAGGCATTTAAAAAATATCTGCAGACTCTAAATATGTTTAGTATTATTGTTACGAGCCATCCTTATTTTATTATCGAGTCAGATACATTAGCGCTTATTAAAATGAATGGAGAACCGGTGAATACTCAACAAATAAGAGAAGAGTTATTGTTGTTTAAAGAAAAAGAATCAATAACTGATTTGGATAAGACAAGCAAAATGATAGCTTATCATGAATTTTGCCAACATCCATATCTTGATGATGAGTTCTTCATTCAATTTATGAACAAATATTAGTTTACTGTCATTATAAAGGTCTCTAAAACCTTGATTTCTCATTGTTTAAG
# Right flank :  AAGCGGGTATAACTTAACTATTTATCGTGCTTGTTTGAATGGAAAAATCTTTATATTTGTTTTGGAAATGTCTTTGACTTTTCATCTATCTGTGTTAAACTTAGTACAGTTTAATAAAGAAATCGTAAGTCTTTAATTGAGAGTACAGAGATGCTCCGAAGGCAGATAATTTACATGTTGAAACTAGAGAAAGTAACTAAGTAAACACTTTATTAAGAGGTAATTTTGTATGAACACGCAATTCACCAACCCTGATTGCCATACAAATTTAGTAAAGTAACCGACAAAACAGTTACTGATTTAAATAGTTGAGATAGTAAATCTCGCATGTTCTTCGTGTCCCGTGTCTCTCAATTGAGATACGGGATTTTTTTATGGAAAGGTGAGTGCGGGAATGACAGAACGTATTGTATTAGATGATGCAGGCATGCAGCGGACTTTAACACGTATCGCACATGAAATTTTAGAGTATAACAAAGGTACTGAAAATCTTGTGTTGC

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//