Array 1 52981-55878 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFCM01000021.1 Corynebacterium jeikeium strain Cj47447 314, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 52981 29 96.6 32 ............................C GACACCTTATTCGCCTCGATGGTGGGCGTGTG 53042 29 96.6 32 ............................C GATGGGCGCGCGACAATCTCGAATACAGGTGC 53103 29 96.6 32 ............................C TTCGAAGCATCCTCGACGGGAGCGCCGATAGT 53164 29 96.6 32 ............................C GTTTGGATTTCCGTGATGGGTTGGATGCCGGT 53225 29 96.6 32 ............................T GCCTGTCGATGGCCTCCACTACGAGAACGGTT 53286 29 100.0 32 ............................. TAACCCAGCAGCGCTAGACCGCATGGGCACGC 53347 29 96.6 32 ............................C AAAGGCACACACACAGGCCGCCCCAACGAAAT 53408 29 100.0 32 ............................. TCGACGAACCGGGTTACCTCGCCGACCACATC 53469 29 100.0 32 ............................. GTACCTCTGGACGTGCTGGAGGACATGGTGGA 53530 29 100.0 32 ............................. CACTCGATGGTGACCTCGTACTTCACCACGTC 53591 29 100.0 33 ............................. GTTACGACCACTGGGTCAGGTGTGAAACCGGCG 53653 29 100.0 32 ............................. GCTATCGACGGCCTCACAGACAAGGTTAAGGG 53714 29 96.6 32 ............................T CGCCCTAATCTTCTCCTCCACCGAGCTTGTAG 53775 29 100.0 32 ............................. GCCACGGCTGCATGGGAGGGCATTAAGAATGC 53836 29 100.0 32 ............................. ACCACCGTGGCCTTAGAGGTGATGTAGGTGCA 53897 29 100.0 32 ............................. GGCAAGGGGTGGGTGGTGACGGCGGACGGTCG 53958 29 100.0 32 ............................. TGTATAGGGTTATCGCCCCTGCGCTGGGCGCG 54019 29 96.6 32 ............................T GGTCTTAAAGACCTTCGGCTTAACCTCACGCA 54080 29 100.0 32 ............................. TAGCGGCCTGCCTTGTCCTCGCGGGCTTGCTC 54141 29 96.6 32 ............................C GAGGCCGGGGTTATGGGGTGCGGTGAAGGTTG 54202 29 96.6 32 ............................A GTGCGGGATGAACTGCGCCGCATCCCGAAGGA 54263 29 100.0 32 ............................. GACGCGATCACCCGCAAGGAAGGCAAGAAGCT 54324 29 100.0 32 ............................. TCCGCCCACCCCTTCTCCACCATCTCTTTAAT 54385 29 100.0 32 ............................. CAAACGATCCAAACCGGCATCGACGGGTTCCG 54446 29 100.0 32 ............................. TCCGCCCACCCCTTCTCCACCATCTCCTTAAT 54507 29 100.0 32 ............................. CAGCGTTACGGTGGCCCCGGTGCTGTGTGGCC 54568 29 100.0 32 ............................. TCTTCCGCGCCTGCTCCGCAAACGCCATCGAC 54629 29 100.0 32 ............................. GGCGATAAGGGTGACCCTGGTGGTGTGCGGGG 54690 29 100.0 32 ............................. GTATCTAGCCCGTCGCGCAACCCCTTGAAAGT 54751 29 100.0 32 ............................. GTCGACCGCTACGCCCCTAGTACCCTCGGCAG 54812 29 100.0 32 ............................. CCGATGTAGTAGTTCAGCCGTGTAGGTAGCCA 54873 29 100.0 32 ............................. GCATCCGTGGTCGATTGAGGTTTGGATGAGGT 54934 29 96.6 32 ............................T GAGTGCTGCAACCCCATATCGCGTCGAAACAC 54995 29 100.0 32 ............................. GGCACGCCCGGTGACCGACTACGCCGCGAGAT 55056 29 100.0 32 ............................. ACTACTGACGCGCTTGGCGATGGTGACGAGAA 55117 29 93.1 32 ...T........................T GGAACGCAACCGGGATAAAAACCCGCCACGGT 55178 29 100.0 32 ............................. TACCAGAAGGCTGTGGCTTCTGGGAATTCTGG 55239 29 96.6 33 ............................A GGAGAAGGCGCTAGCGGAGGCGCGTAAGGCTCT 55301 29 96.6 32 ............................T GCGTACGGTGTGATTAACCCGGCGCTCCGGTC 55362 29 100.0 32 ............................. CCGATCGAGAAGTGCGGCAGCTCTTCGGCGGA 55423 29 96.6 32 ............................T CTTTCGATCTGCCATGTCATCACCTCCCTAGG 55484 29 100.0 32 ............................. CAACGCTCAGCACTTGATTGGACTCGTCGCGC 55545 29 100.0 32 ............................. GTGTTTGAGTGCGGCGGGGTGGCCAGTGTCAG 55606 29 100.0 32 ............................. GAGGGGAGCGCGGCGGCGAACGTGTTTAAGAC 55667 29 100.0 32 ............................. TTCGCGCTGTTCAGTGTCAGAGAGTGCCATGA 55728 29 100.0 32 ............................. TCGATCCGGTTGCCGTTATGTAGGTTCACACA 55789 29 100.0 32 ............................. TCCAGGTCCCAGTGGAAGAAGGCTTGTTCCTG 55850 29 93.1 0 .......................T....T | ========== ====== ====== ====== ============================= ================================= ================== 48 29 98.7 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : CATTGACGCTGAGCTGGTGCTGTGGTCTGACCTGGAGGTTGTTTCGTCAGGGCATAACTGGGCAGACGAGGGGCCTATCGGATGATGGTTCTGGTAGTTTCTGCCTGCCCGGCGGGTCTTCGTGGTGACCTCACAAGGTGGCTGTTGGAGATTTCCCCCGGCGTATTTGTAGGGCGCCCCAGTGCCAGAGTGCGCGACCAGGTGTGGGAGCGAACATGCGACCTGGTGAATGATGGCCGAGCGATCATGGTGTTCCAGGCAGCAAACGAGCAGGGCTTTGATTTCAAGACTCACCGGCATAACTGGGTTCCAACTGATTTCGATGGGGTGAACTTGATTACGCGCCCCAACAACCGGGCAGCTTCGACGAGGCGGCGCGGATGGAGTAATGCGCGGAGGAGGTAAAGCGTCGGTGATCGTTCGCTAGTCCGGTAGGCGGTGGTGAAAACAAGCTGAAGTAGAATTGGCCCAACGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : TCAGGGAGTGCTATTTTGACGCGATTTCCACGGATCACCAGCATTCACCGCTCCTGAAAGGCGGGACGACCTCCAAAATGAAGAAAGCTTTCTATTCAATGCTTAACAGCAAAGAAATTCAATAGAAAGAAACGAAACTAAATTGAAAAGATCGTGGTTACTGATCTTCTGATACTCTCACATAATCAGGACGATGTTCCTTTAGGAAACTCCGTAAGCATTCGCCTGGGTTACTGCCAGGTGAAAAGAGATCGAGGATCTTATCCAACATGTCAGGCGCGATAAACACACCACCTTCGACCGAGTAGTAGACCGCACTCTCGAGTGCATATTCGAATTCTCCCCCTAAGGCGGGAGTAAAGGCGTGGTCAATCCCTGCAGTGACGAACTGCTCTCCATAACGGGAAAGAAATTCTTCGAATACATCCATCGAGGGATCCGCACGCATCTTACGATCCTCTCCGCTTTACCGCACGGTAGCTAAAAACGTGATTGTAACT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //